Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
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Accession | NC_011593 |
Length | 2,832,748 |
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The map label for this gene is 213690972
Identifier: 213690972
GI number: 213690972
Start: 54634
End: 55857
Strand: Reverse
Name: 213690972
Synonym: Blon_0049
Alternate gene names: NA
Gene position: 55857-54634 (Counterclockwise)
Preceding gene: 213690980
Following gene: 213690971
Centisome position: 1.97
GC content: 59.4
Gene sequence:
>1224_bases ATGACGGGATATATCGCACGAGACAAGCTCACCGACACGCTGCGCAGCCACCGGAACACCCCGGAGATCAAGGTGCTTAC CGGCGTCCGACGGTGCGGGAAAAGCACGCTGCTGGAACATTATGCGCAATCACTGCTCGACGACGGCGTTCCCGCGAGCA ATATCTTCACCCGTCGCTTCGATTCCTTCGACACGCCCATCGGATATTCGGCGACCGACCTGCACGCCGACCTGATGCAA GCCACGCAAGAAGCCCAACCCGGCCCCTTCTACGTTTTCCTTGATGAAATACAGGACGTTCCCGGATGGGAGGAAGTGGT TCGCCGGCTGCATTCCCGTGACGACACCGACGTGTATGCCACCGGATCGAACGCACGACTGCTATCCGGCGAACTGGCGA CCCATCTGACGGGTCGCTACATCACCATCCCCATATATCCGCTCTCCTTCGACGAATACCAACGCCATCATCGGGCTCAG GGAACCACGGATTCCACGGACCAGCTGTTCTCCGAATACATGATGTTCGGCGGCATGCCCGGCCTGTTCGTCACCGGCCA GCCGGATCAGGACAAGGCGACCGAAATACTCACCTCAATCTACGAATCCATTGTGATGAAGGACGTGGCGGGAAGGTACG GCATCCGCGACATCGCCACATTGGAAAAACTCAGCCGATATCTGTTCTCAACGTCGGGGAACCTGTTCTCCGTCAACAAG GTCGCCAACACGCTCACAAGCGCCGGCGCGAACGCCTCCTACGCCACCGTCGACAACCAGATCAGCGCGCTCGAACGCTC GTTCATCGTCTACAGCGCGCAACAGGAACGCATGCGAGGCAAGGAACTGCTGCGCCCGCAACGCAAGTTCTACCCCGTCG ACAACGGTTTTCGCAATCTCGCCACGGGTTTCAACGGCTCGGATCGCGGAGCCCAGCTCGAAGGCATCGTCTTCATGGAA CTGCAGCGACGCGGTTACGATGTCACCATCGGATCGCTGCCCGACGGCGAGATCGATTTCATCGCGAAGCGCGGAAACAA CAAGCAGTACATTCAGGTCACGTTGAACATGACCGAGGAGCAGACCCGGGAGCGGGAATTAGCCCCGCTGCGGCGATTGG GCGACGCATTCCCCCGCACGGTGCTCACCCTCGACTGGCATAGCGAGGGCATGACCGACGAAGGCATCCATATCACCAAC GTCATGGATTGGCTCTGCTCGTAG
Upstream 100 bases:
>100_bases TATAGAATCATTACCCCAGAACGCACAATTTCAAGTATACTGAAAATCAACGTCGATCTAACGACTGTTTTGCAATACAC TAGAAATCGGAGGCGTGGAG
Downstream 100 bases:
>100_bases GAACGCGCCGGATACGACGTCACGCCGAAGGGGTGCTCACAGAACGGCGGATAGGTTTCGCACAATGGCGGAATTCCAAT AGTTGCTTTTCGGCAACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRFDSFDTPIGYSATDLHADLMQ ATQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYATGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQ GTTDSTDQLFSEYMMFGGMPGLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNK VANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNLATGFNGSDRGAQLEGIVFME LQRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEEQTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITN VMDWLCS
Sequences:
>Translated_407_residues MTGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRFDSFDTPIGYSATDLHADLMQ ATQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYATGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQ GTTDSTDQLFSEYMMFGGMPGLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNK VANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNLATGFNGSDRGAQLEGIVFME LQRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEEQTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITN VMDWLCS >Mature_406_residues TGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRFDSFDTPIGYSATDLHADLMQA TQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYATGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQG TTDSTDQLFSEYMMFGGMPGLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNKV ANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNLATGFNGSDRGAQLEGIVFMEL QRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEEQTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITNV MDWLCS
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45881; Mature: 45750
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRF CCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHH DSFDTPIGYSATDLHADLMQATQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYA CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHCCCCCCEEE TGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQGTTDSTDQLFSEYMMFGGMP ECCCCEEECCHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC GLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNK CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHH VANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNL HHHHHHHCCCCCCEEHHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHCCCCCCCHHHH ATGFNGSDRGAQLEGIVFMELQRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEE HCCCCCCCCCCEECCEEEEEEHHCCCEEEECCCCCCCEEEEEECCCCCEEEEEEEECCHH QTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITNVMDWLCS HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHHHHHHCC >Mature Secondary Structure TGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRF CCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHH DSFDTPIGYSATDLHADLMQATQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYA CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHCCCCCCEEE TGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQGTTDSTDQLFSEYMMFGGMP ECCCCEEECCHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC GLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNK CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHH VANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNL HHHHHHHCCCCCCEEHHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHCCCCCCCHHHH ATGFNGSDRGAQLEGIVFMELQRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEE HCCCCCCCCCCEECCEEEEEEHHCCCEEEECCCCCCCEEEEEECCCCCEEEEEEEECCHH QTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITNVMDWLCS HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]