Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213690972

Identifier: 213690972

GI number: 213690972

Start: 54634

End: 55857

Strand: Reverse

Name: 213690972

Synonym: Blon_0049

Alternate gene names: NA

Gene position: 55857-54634 (Counterclockwise)

Preceding gene: 213690980

Following gene: 213690971

Centisome position: 1.97

GC content: 59.4

Gene sequence:

>1224_bases
ATGACGGGATATATCGCACGAGACAAGCTCACCGACACGCTGCGCAGCCACCGGAACACCCCGGAGATCAAGGTGCTTAC
CGGCGTCCGACGGTGCGGGAAAAGCACGCTGCTGGAACATTATGCGCAATCACTGCTCGACGACGGCGTTCCCGCGAGCA
ATATCTTCACCCGTCGCTTCGATTCCTTCGACACGCCCATCGGATATTCGGCGACCGACCTGCACGCCGACCTGATGCAA
GCCACGCAAGAAGCCCAACCCGGCCCCTTCTACGTTTTCCTTGATGAAATACAGGACGTTCCCGGATGGGAGGAAGTGGT
TCGCCGGCTGCATTCCCGTGACGACACCGACGTGTATGCCACCGGATCGAACGCACGACTGCTATCCGGCGAACTGGCGA
CCCATCTGACGGGTCGCTACATCACCATCCCCATATATCCGCTCTCCTTCGACGAATACCAACGCCATCATCGGGCTCAG
GGAACCACGGATTCCACGGACCAGCTGTTCTCCGAATACATGATGTTCGGCGGCATGCCCGGCCTGTTCGTCACCGGCCA
GCCGGATCAGGACAAGGCGACCGAAATACTCACCTCAATCTACGAATCCATTGTGATGAAGGACGTGGCGGGAAGGTACG
GCATCCGCGACATCGCCACATTGGAAAAACTCAGCCGATATCTGTTCTCAACGTCGGGGAACCTGTTCTCCGTCAACAAG
GTCGCCAACACGCTCACAAGCGCCGGCGCGAACGCCTCCTACGCCACCGTCGACAACCAGATCAGCGCGCTCGAACGCTC
GTTCATCGTCTACAGCGCGCAACAGGAACGCATGCGAGGCAAGGAACTGCTGCGCCCGCAACGCAAGTTCTACCCCGTCG
ACAACGGTTTTCGCAATCTCGCCACGGGTTTCAACGGCTCGGATCGCGGAGCCCAGCTCGAAGGCATCGTCTTCATGGAA
CTGCAGCGACGCGGTTACGATGTCACCATCGGATCGCTGCCCGACGGCGAGATCGATTTCATCGCGAAGCGCGGAAACAA
CAAGCAGTACATTCAGGTCACGTTGAACATGACCGAGGAGCAGACCCGGGAGCGGGAATTAGCCCCGCTGCGGCGATTGG
GCGACGCATTCCCCCGCACGGTGCTCACCCTCGACTGGCATAGCGAGGGCATGACCGACGAAGGCATCCATATCACCAAC
GTCATGGATTGGCTCTGCTCGTAG

Upstream 100 bases:

>100_bases
TATAGAATCATTACCCCAGAACGCACAATTTCAAGTATACTGAAAATCAACGTCGATCTAACGACTGTTTTGCAATACAC
TAGAAATCGGAGGCGTGGAG

Downstream 100 bases:

>100_bases
GAACGCGCCGGATACGACGTCACGCCGAAGGGGTGCTCACAGAACGGCGGATAGGTTTCGCACAATGGCGGAATTCCAAT
AGTTGCTTTTCGGCAACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRFDSFDTPIGYSATDLHADLMQ
ATQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYATGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQ
GTTDSTDQLFSEYMMFGGMPGLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNK
VANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNLATGFNGSDRGAQLEGIVFME
LQRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEEQTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITN
VMDWLCS

Sequences:

>Translated_407_residues
MTGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRFDSFDTPIGYSATDLHADLMQ
ATQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYATGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQ
GTTDSTDQLFSEYMMFGGMPGLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNK
VANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNLATGFNGSDRGAQLEGIVFME
LQRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEEQTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITN
VMDWLCS
>Mature_406_residues
TGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRFDSFDTPIGYSATDLHADLMQA
TQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYATGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQG
TTDSTDQLFSEYMMFGGMPGLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNKV
ANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNLATGFNGSDRGAQLEGIVFMEL
QRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEEQTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITNV
MDWLCS

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1544 and MJ1637 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45881; Mature: 45750

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRF
CCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHH
DSFDTPIGYSATDLHADLMQATQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHCCCCCCEEE
TGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQGTTDSTDQLFSEYMMFGGMP
ECCCCEEECCHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
GLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNK
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHH
VANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNL
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHCCCCCCCHHHH
ATGFNGSDRGAQLEGIVFMELQRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEE
HCCCCCCCCCCEECCEEEEEEHHCCCEEEECCCCCCCEEEEEECCCCCEEEEEEEECCHH
QTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITNVMDWLCS
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHHHHHHCC
>Mature Secondary Structure 
TGYIARDKLTDTLRSHRNTPEIKVLTGVRRCGKSTLLEHYAQSLLDDGVPASNIFTRRF
CCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHH
DSFDTPIGYSATDLHADLMQATQEAQPGPFYVFLDEIQDVPGWEEVVRRLHSRDDTDVYA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHCCCCCCEEE
TGSNARLLSGELATHLTGRYITIPIYPLSFDEYQRHHRAQGTTDSTDQLFSEYMMFGGMP
ECCCCEEECCHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
GLFVTGQPDQDKATEILTSIYESIVMKDVAGRYGIRDIATLEKLSRYLFSTSGNLFSVNK
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEHHH
VANTLTSAGANASYATVDNQISALERSFIVYSAQQERMRGKELLRPQRKFYPVDNGFRNL
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHCCCCCCCHHHH
ATGFNGSDRGAQLEGIVFMELQRRGYDVTIGSLPDGEIDFIAKRGNNKQYIQVTLNMTEE
HCCCCCCCCCCEECCEEEEEEHHCCCEEEECCCCCCCEEEEEECCCCCEEEEEEEECCHH
QTRERELAPLRRLGDAFPRTVLTLDWHSEGMTDEGIHITNVMDWLCS
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]