Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
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Accession | NC_011593 |
Length | 2,832,748 |
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The map label for this gene is 213690952
Identifier: 213690952
GI number: 213690952
Start: 26654
End: 27940
Strand: Reverse
Name: 213690952
Synonym: Blon_0026
Alternate gene names: NA
Gene position: 27940-26654 (Counterclockwise)
Preceding gene: 213690954
Following gene: 213690951
Centisome position: 0.99
GC content: 61.93
Gene sequence:
>1287_bases ATGCGCATCTCCAGGGATAAGTACCTGAACGATCTCGTCGCGCGCAAAGGCAACGGCATGGTCAAGGTCGTCACGGGCGC GAGGCGCTGCGGCAAGACCTATCTCCTGTTCGACCTGTTCGAGGACCATCTGCGCGCGCAGGGCGTGGACGACGACCACA TCATCGAGATCGCACTGGACGATCTGATGTACGAGCGCTACCGCGACCCGCTCGCCCTGTACGACTATGTGAGATCCCGT ATCACGAATCGCGAGGAACCGTACTACGTGCTGCTGGACGAGGTGCAGTACGCGATCTCGGACGAGGAGATGCGCGGCGA GGAACCGCCCCGTCTGTACGGGGTGCTCAACGGGCTGCTGCGCATGCGCAACGTGGACGTGTACGTGACGGGCAGCAACT CGAAGATGCTGTCCACCGACGTGATGACCGAGTTCCGCGGCCGCGGCGACGAGGTCCGCGTCCGCCCCCTGTCGTTCGTC GAGTTCATGCAGGCGTACGACGGCGACGTCCAACACGGCTGGGCCGAATACGTGATGTTCGGCGGCATGCCGCTCACCTT GTCCATGAGAAGCGACGAGCAGAAGTCCCTCTATCTGAAGAACCTGTTCGAGGAGACCTATCTCAAGGACATCGTCTCGC GCAACAGGCTGCGCAGGTCGCAGGAGCTCGACGACCTGGTCGACGTGCTGGCCTCCTCCATCGGCGCCCTGACCAATCCG TCCAAGATCAAGGCCACGTTCGCCAGCGTGCTGCATTCCGGCATCAGCACGAACACCATCATGCAATACATCGGCCATCT CGAGGACGCGTTCGTCATCGAGGAGGCGAGACGGTTCGACGTCAAGGGACGCAAGTACATCGGCAGCCCGAAGAAATACT ATTTCGAGGACATGGGGCTGCGCAACGCGCGACTGGGGTTCCGCCAGATCGAGCAGACGCACATCATGGAGAACATCGTG TACAACGAGCTGCGAACACGCGGCTACAACGTCGATGTGGGCGTGGTCGACCGGCGCGGCGCCCGCGAAGGTGTGCCGTA CCGCAAACGCCTCGAGGTCGATTTCGTGGCGAACCTCGGCAACCGGCGCTGCTACATCCAATCCGCGTACCAACTGCCCA CACCGGAGAAGGTCGCGCAGGAGAAGGCCTCGCTGCTCGAGATCGACGACAGCTTCCAGAAGATCGTCCTCGTATGCGAC GTGGTCAAACCCGTCCGCGACGAGCACGGCATCCTCACGATGAGCGTCTACGATTTCCTCCTCGACCCGGACAGCCTGAC GATGTGA
Upstream 100 bases:
>100_bases AAAATCGCGCAATAGAATGAGTTCCTATTGAGTGAAACTGACATAAATGTCAAATCCACGCGATAGCGGCATGGGAACAG GACATTGATCGGAGAATACG
Downstream 100 bases:
>100_bases CGCCGGACGGCCGGCAGATGCCCCGGAACGCAGACCCCCTTATCGGGGCTTGGCATCATCACGTATCCGCCCGGTCCGCC GCAAACCTCAAACACTCAAG
Product: ATPase (AAA+ superfamily)-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALDDLMYERYRDPLALYDYVRSR ITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLLRMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFV EFMQAYDGDVQHGWAEYVMFGGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGLRNARLGFRQIEQTHIMENIV YNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLGNRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCD VVKPVRDEHGILTMSVYDFLLDPDSLTM
Sequences:
>Translated_428_residues MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALDDLMYERYRDPLALYDYVRSR ITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLLRMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFV EFMQAYDGDVQHGWAEYVMFGGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGLRNARLGFRQIEQTHIMENIV YNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLGNRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCD VVKPVRDEHGILTMSVYDFLLDPDSLTM >Mature_428_residues MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALDDLMYERYRDPLALYDYVRSR ITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLLRMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFV EFMQAYDGDVQHGWAEYVMFGGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGLRNARLGFRQIEQTHIMENIV YNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLGNRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCD VVKPVRDEHGILTMSVYDFLLDPDSLTM
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49492; Mature: 49492
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALD CCCCHHHHHHHHHHHCCCCEEEEEECHHHHCCEEHHHHHHHHHHHHCCCCCCCEEHHHHH DLMYERYRDPLALYDYVRSRITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLL HHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCHHHCCCCCHHHHHHHHHHH RMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFVEFMQAYDGDVQHGWAEYVMF HHCCCEEEEECCCCCEEHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHC GGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHCCC RNARLGFRQIEQTHIMENIVYNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCHHHEECCC NRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCDVVKPVRDEHGILTMSVYDFL CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH LDPDSLTM CCCCCCCC >Mature Secondary Structure MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALD CCCCHHHHHHHHHHHCCCCEEEEEECHHHHCCEEHHHHHHHHHHHHCCCCCCCEEHHHHH DLMYERYRDPLALYDYVRSRITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLL HHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCHHHCCCCCHHHHHHHHHHH RMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFVEFMQAYDGDVQHGWAEYVMF HHCCCEEEEECCCCCEEHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHC GGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHCCC RNARLGFRQIEQTHIMENIVYNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLG CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCHHHEECCC NRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCDVVKPVRDEHGILTMSVYDFL CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH LDPDSLTM CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]