Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213690952

Identifier: 213690952

GI number: 213690952

Start: 26654

End: 27940

Strand: Reverse

Name: 213690952

Synonym: Blon_0026

Alternate gene names: NA

Gene position: 27940-26654 (Counterclockwise)

Preceding gene: 213690954

Following gene: 213690951

Centisome position: 0.99

GC content: 61.93

Gene sequence:

>1287_bases
ATGCGCATCTCCAGGGATAAGTACCTGAACGATCTCGTCGCGCGCAAAGGCAACGGCATGGTCAAGGTCGTCACGGGCGC
GAGGCGCTGCGGCAAGACCTATCTCCTGTTCGACCTGTTCGAGGACCATCTGCGCGCGCAGGGCGTGGACGACGACCACA
TCATCGAGATCGCACTGGACGATCTGATGTACGAGCGCTACCGCGACCCGCTCGCCCTGTACGACTATGTGAGATCCCGT
ATCACGAATCGCGAGGAACCGTACTACGTGCTGCTGGACGAGGTGCAGTACGCGATCTCGGACGAGGAGATGCGCGGCGA
GGAACCGCCCCGTCTGTACGGGGTGCTCAACGGGCTGCTGCGCATGCGCAACGTGGACGTGTACGTGACGGGCAGCAACT
CGAAGATGCTGTCCACCGACGTGATGACCGAGTTCCGCGGCCGCGGCGACGAGGTCCGCGTCCGCCCCCTGTCGTTCGTC
GAGTTCATGCAGGCGTACGACGGCGACGTCCAACACGGCTGGGCCGAATACGTGATGTTCGGCGGCATGCCGCTCACCTT
GTCCATGAGAAGCGACGAGCAGAAGTCCCTCTATCTGAAGAACCTGTTCGAGGAGACCTATCTCAAGGACATCGTCTCGC
GCAACAGGCTGCGCAGGTCGCAGGAGCTCGACGACCTGGTCGACGTGCTGGCCTCCTCCATCGGCGCCCTGACCAATCCG
TCCAAGATCAAGGCCACGTTCGCCAGCGTGCTGCATTCCGGCATCAGCACGAACACCATCATGCAATACATCGGCCATCT
CGAGGACGCGTTCGTCATCGAGGAGGCGAGACGGTTCGACGTCAAGGGACGCAAGTACATCGGCAGCCCGAAGAAATACT
ATTTCGAGGACATGGGGCTGCGCAACGCGCGACTGGGGTTCCGCCAGATCGAGCAGACGCACATCATGGAGAACATCGTG
TACAACGAGCTGCGAACACGCGGCTACAACGTCGATGTGGGCGTGGTCGACCGGCGCGGCGCCCGCGAAGGTGTGCCGTA
CCGCAAACGCCTCGAGGTCGATTTCGTGGCGAACCTCGGCAACCGGCGCTGCTACATCCAATCCGCGTACCAACTGCCCA
CACCGGAGAAGGTCGCGCAGGAGAAGGCCTCGCTGCTCGAGATCGACGACAGCTTCCAGAAGATCGTCCTCGTATGCGAC
GTGGTCAAACCCGTCCGCGACGAGCACGGCATCCTCACGATGAGCGTCTACGATTTCCTCCTCGACCCGGACAGCCTGAC
GATGTGA

Upstream 100 bases:

>100_bases
AAAATCGCGCAATAGAATGAGTTCCTATTGAGTGAAACTGACATAAATGTCAAATCCACGCGATAGCGGCATGGGAACAG
GACATTGATCGGAGAATACG

Downstream 100 bases:

>100_bases
CGCCGGACGGCCGGCAGATGCCCCGGAACGCAGACCCCCTTATCGGGGCTTGGCATCATCACGTATCCGCCCGGTCCGCC
GCAAACCTCAAACACTCAAG

Product: ATPase (AAA+ superfamily)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALDDLMYERYRDPLALYDYVRSR
ITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLLRMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFV
EFMQAYDGDVQHGWAEYVMFGGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP
SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGLRNARLGFRQIEQTHIMENIV
YNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLGNRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCD
VVKPVRDEHGILTMSVYDFLLDPDSLTM

Sequences:

>Translated_428_residues
MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALDDLMYERYRDPLALYDYVRSR
ITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLLRMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFV
EFMQAYDGDVQHGWAEYVMFGGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP
SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGLRNARLGFRQIEQTHIMENIV
YNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLGNRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCD
VVKPVRDEHGILTMSVYDFLLDPDSLTM
>Mature_428_residues
MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALDDLMYERYRDPLALYDYVRSR
ITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLLRMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFV
EFMQAYDGDVQHGWAEYVMFGGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP
SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGLRNARLGFRQIEQTHIMENIV
YNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLGNRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCD
VVKPVRDEHGILTMSVYDFLLDPDSLTM

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1544 and MJ1637 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49492; Mature: 49492

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALD
CCCCHHHHHHHHHHHCCCCEEEEEECHHHHCCEEHHHHHHHHHHHHCCCCCCCEEHHHHH
DLMYERYRDPLALYDYVRSRITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLL
HHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCHHHCCCCCHHHHHHHHHHH
RMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFVEFMQAYDGDVQHGWAEYVMF
HHCCCEEEEECCCCCEEHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHC
GGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHCCC
RNARLGFRQIEQTHIMENIVYNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCHHHEECCC
NRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCDVVKPVRDEHGILTMSVYDFL
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH
LDPDSLTM
CCCCCCCC
>Mature Secondary Structure
MRISRDKYLNDLVARKGNGMVKVVTGARRCGKTYLLFDLFEDHLRAQGVDDDHIIEIALD
CCCCHHHHHHHHHHHCCCCEEEEEECHHHHCCEEHHHHHHHHHHHHCCCCCCCEEHHHHH
DLMYERYRDPLALYDYVRSRITNREEPYYVLLDEVQYAISDEEMRGEEPPRLYGVLNGLL
HHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCHHHCCCCCHHHHHHHHHHH
RMRNVDVYVTGSNSKMLSTDVMTEFRGRGDEVRVRPLSFVEFMQAYDGDVQHGWAEYVMF
HHCCCEEEEECCCCCEEHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHC
GGMPLTLSMRSDEQKSLYLKNLFEETYLKDIVSRNRLRRSQELDDLVDVLASSIGALTNP
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKIKATFASVLHSGISTNTIMQYIGHLEDAFVIEEARRFDVKGRKYIGSPKKYYFEDMGL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHCCC
RNARLGFRQIEQTHIMENIVYNELRTRGYNVDVGVVDRRGAREGVPYRKRLEVDFVANLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCHHHEECCC
NRRCYIQSAYQLPTPEKVAQEKASLLEIDDSFQKIVLVCDVVKPVRDEHGILTMSVYDFL
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH
LDPDSLTM
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]