Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is phoC [H]
Identifier: 21245081
GI number: 21245081
Start: 5167681
End: 5168538
Strand: Direct
Name: phoC [H]
Synonym: XAC4369
Alternate gene names: 21245081
Gene position: 5167681-5168538 (Clockwise)
Preceding gene: 77748778
Following gene: NA
Centisome position: 99.85
GC content: 68.18
Gene sequence:
>858_bases ATGTCGCAGCGCATTGCTTGCCACTCTCATCGGACGCTGGTCAGCGTTGCCATCGCCGCACTGTTGATCGGCAGCGGCAT CGCAAGTGCACGAGACAAGGCAGCCTCGAAAGATTCGGTGCTCGCCACCGACGCGCATGGGTATCTAGAGAACCAACAAC TGCCCGACAGCGTGCAGCTGGTGCCACCGCCACCGCAGGATGGCAGCGCTGCGCTCGCCAACGACGAGGCGGTCGCCAAG GCCATGCTCGCCCTGCGCGGGACACCGCGCTGGGAGCTGGCCGCGCAGGACGCGGTCCTGAGCTTTCCGGCTGCGGCCAC GCACTTCAGCTGCGCGCTCGGCATACAGATCGACCAGGCCAGCACCCCGCATCTGATCGGTCTGCTCGAACGCAGCATGC GCGATGCCAGCACCGCCACCAGCGCCGCCAAGGCACGCTACCAACGCCCGCGTCCTTTCATGCGCAACGCGCAACCGATG TGCACTCCGGCCGATGACGCGGCCCTGCGCAAGAACGGCTCCTACCCCTCCGGCCACACCGCCATCGGCTGGACCTGGGG CCTGATCCTGTCCGAAATCGCCCCCGCCCACCGCGACGCCCTGCTCGCGCGCGGCCGCGCCTTCGGCGACAGCCGCCTGG TCTGCAACGTGCACTGGCAGAGCGATGTCATCCAGGGCCGCGTGGTGGGCGCCGCCACCGTTGCCGCCCTGCACGCCAAT CCTGCGTTCGAAAAGGACCTGGCCGCCGCACGCCGCGAGATCGAACAGGCGCAGTCCAAGCAGCCGGCCGCGTCATCGGT GGCTGCGTGCAACGCGGAAAGCGAAGCACTCAAGACCGCATTGCCTGGGGTGATGTAG
Upstream 100 bases:
>100_bases CGTTTCGCATCCCTCGCCGTTGCTGCGTCGCGTTGGCATGCAGCTGTCATCGAGCCGTCGTAATCTGCGAGCTCTTCCAT TTGTGTTGTCTGAGGTTGCT
Downstream 100 bases:
>100_bases TCCACGGCAAGCGCACGGGCGGTGCGCCTGCGGTGCTCGGACGATGTGCGACAGTTTGCGCCCGCATCGCCGTCCACGCA GCTGATGTGCGGCGGCAGAT
Product: phosphatase
Products: NA
Alternate protein names: HPAP [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSQRIACHSHRTLVSVAIAALLIGSGIASARDKAASKDSVLATDAHGYLENQQLPDSVQLVPPPPQDGSAALANDEAVAK AMLALRGTPRWELAAQDAVLSFPAAATHFSCALGIQIDQASTPHLIGLLERSMRDASTATSAAKARYQRPRPFMRNAQPM CTPADDAALRKNGSYPSGHTAIGWTWGLILSEIAPAHRDALLARGRAFGDSRLVCNVHWQSDVIQGRVVGAATVAALHAN PAFEKDLAAARREIEQAQSKQPAASSVAACNAESEALKTALPGVM
Sequences:
>Translated_285_residues MSQRIACHSHRTLVSVAIAALLIGSGIASARDKAASKDSVLATDAHGYLENQQLPDSVQLVPPPPQDGSAALANDEAVAK AMLALRGTPRWELAAQDAVLSFPAAATHFSCALGIQIDQASTPHLIGLLERSMRDASTATSAAKARYQRPRPFMRNAQPM CTPADDAALRKNGSYPSGHTAIGWTWGLILSEIAPAHRDALLARGRAFGDSRLVCNVHWQSDVIQGRVVGAATVAALHAN PAFEKDLAAARREIEQAQSKQPAASSVAACNAESEALKTALPGVM >Mature_284_residues SQRIACHSHRTLVSVAIAALLIGSGIASARDKAASKDSVLATDAHGYLENQQLPDSVQLVPPPPQDGSAALANDEAVAKA MLALRGTPRWELAAQDAVLSFPAAATHFSCALGIQIDQASTPHLIGLLERSMRDASTATSAAKARYQRPRPFMRNAQPMC TPADDAALRKNGSYPSGHTAIGWTWGLILSEIAPAHRDALLARGRAFGDSRLVCNVHWQSDVIQGRVVGAATVAALHANP AFEKDLAAARREIEQAQSKQPAASSVAACNAESEALKTALPGVM
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class A bacterial acid phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011158 - InterPro: IPR001011 - InterPro: IPR018296 - InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: =3.1.3.2 [H]
Molecular weight: Translated: 29962; Mature: 29831
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS01157 ACID_PHOSPH_CL_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRIACHSHRTLVSVAIAALLIGSGIASARDKAASKDSVLATDAHGYLENQQLPDSVQL CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEE VPPPPQDGSAALANDEAVAKAMLALRGTPRWELAAQDAVLSFPAAATHFSCALGIQIDQA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHEEEEEEEECCC STPHLIGLLERSMRDASTATSAAKARYQRPRPFMRNAQPMCTPADDAALRKNGSYPSGHT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHCCCCCCCCCC AIGWTWGLILSEIAPAHRDALLARGRAFGDSRLVCNVHWQSDVIQGRVVGAATVAALHAN CHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCEEHHHHHHHHHHCC PAFEKDLAAARREIEQAQSKQPAASSVAACNAESEALKTALPGVM CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure SQRIACHSHRTLVSVAIAALLIGSGIASARDKAASKDSVLATDAHGYLENQQLPDSVQL CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEE VPPPPQDGSAALANDEAVAKAMLALRGTPRWELAAQDAVLSFPAAATHFSCALGIQIDQA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHEEEEEEEECCC STPHLIGLLERSMRDASTATSAAKARYQRPRPFMRNAQPMCTPADDAALRKNGSYPSGHT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHCCCCCCCCCC AIGWTWGLILSEIAPAHRDALLARGRAFGDSRLVCNVHWQSDVIQGRVVGAATVAALHAN CHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCEEHHHHHHHHHHCC PAFEKDLAAARREIEQAQSKQPAASSVAACNAESEALKTALPGVM CCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8081499; 10877772 [H]