Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21245033
Identifier: 21245033
GI number: 21245033
Start: 5106045
End: 5107586
Strand: Direct
Name: 21245033
Synonym: XAC4321
Alternate gene names: NA
Gene position: 5106045-5107586 (Clockwise)
Preceding gene: 21245030
Following gene: 21245034
Centisome position: 98.66
GC content: 65.05
Gene sequence:
>1542_bases ATGCGTTCGACACTTCATGCCACCGTCGTGACGGCAGGGCTTCTTGCCCTGATCACCACCAGTGCGGCCATCGCTGCCGT GCCATCGGTGGCGCAGTGCACCACGCCGCAGCCGTGGGCGCACTCCAATGCCGGCGTGGTGGTCGGCAACGGCACGGCCG CCAGTTGTACCGCCAGCGCACTCGCCACTGCGGTGGCGCAAGGTGGCTATGTCACCTTCAACTGCGGCACGCGTGCGGCC AGCATCGCCGTCAACCAGACCATCAACATCAGCGCCAGCACGCCAACGGTGATCGATGGTCAGGGCAAGATCACCCTGGA TGGCCGCCAGGCCGCGCGTATCTTCCAGGTGCAGAACGGCAATGCGCTGTCGGTGCGCAATCTCAAACTGCAGAACGGCA GCTCCGTGCAACCAGCATCCAACACCCAGTACGCGCCCGGCACCTGGGGTGGCGGCGCGATCAAGGTCAGCTACCGCGGC AAGCTGGAAGTGATCAACAGCCAGTTCCTGAGCAACCGCAGCAGCATTGGGGGTGGTGCCATTTTCGCCGGCAGCGATAC CGACGTGACCATCGTCAAGAGCTCGTTCTCCAAGAACACCTCATGGCTGGGCGGCGCGCTCTACACGCAGCTCAGCCGTC TGACCATCGTCAATTCCGAATTTGTCGGCAACCAGGCCATCAATGCGCCGGCCGGCTTCCCGGATGCCGACCAGTTCGGC AACAGCGGCGCGATCGACACCGACGGCGCCTCGCTCGCCGGCTACCTCAACGCCACCGCCGGTGGCGCCACGCTCTCGGT GTGCGGCACGGTGGTGCGCAACAACAGCGCGGCCAACAGCGGCGGCGGCGCCACGTTGTGGGCGTATGCACCGGACACCA TCGACGTGCGCTACTCCACCTTCGCCAACAACATCGCCTATGGCGGCCCGGCCGGCGGTGCGCGCATCAGCCTGGGCTTC GGCGATACCACACACTCCGGCACCACCATCACGACGCCGGGCATCATCAACGTCGAAGAAACCAGCTTCATCTCCAACCG CGCCGAAAAGAGCAACGCCGGTGCCTTGTACATGGACTGCTACGGCCCGTCCTGCAACGTCAGCAACAGCACCTTCTACG GCAACTACGCCAAGGGTGTGGGCGCGGCGATCCAGCATGTGGGCTGGCAGCCATCCAATGGCGACCAGGGCAAGACCACG GTGCGCTTCAACAACGTCACCTTCGCCGAGAACACACCCGGATCGACGTTGTTCGGCAGCGGCTTCGACATCCGCAACAG CATCTTCTACTCCAAGACCGAGCGCACCTTCTGCAGCGACCAGAGCAGCAACGGCAACAACCTGATCGAGTACTCCGCTG CGGGCGGCTTGTTCCATAGTTCCCTCACCGCCGGCCTGGCACGCGCCACCGATCCGCTGCTGGGCGCACCGGCCGCCAAT GGCGGCCCCACGCTCACCCAGTTGCCGGCTGCCAACAGCCCGGTCCGCAACCTCGGCAGCGGCTGTCGCACTATCGACCA GCGTGGTGTTGCGCGTGATTGA
Upstream 100 bases:
>100_bases AGCGACGCTCCGGCTTGCAACACATCTGTCATCACCCGTTGACGTTGCGTGCGGGCAACGGACTCCCCTTCGATCCCTTT CTCCAAGCAGGAACATCACC
Downstream 100 bases:
>100_bases TACGCCCAGGATTTCCTAGACATCTCAAGGCCATGGAAAATGGCTGATTCGGAGGTGTCCATGAGCAGTAAGCGGTATAC GGATGAGTTCAAGATCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MRSTLHATVVTAGLLALITTSAAIAAVPSVAQCTTPQPWAHSNAGVVVGNGTAASCTASALATAVAQGGYVTFNCGTRAA SIAVNQTINISASTPTVIDGQGKITLDGRQAARIFQVQNGNALSVRNLKLQNGSSVQPASNTQYAPGTWGGGAIKVSYRG KLEVINSQFLSNRSSIGGGAIFAGSDTDVTIVKSSFSKNTSWLGGALYTQLSRLTIVNSEFVGNQAINAPAGFPDADQFG NSGAIDTDGASLAGYLNATAGGATLSVCGTVVRNNSAANSGGGATLWAYAPDTIDVRYSTFANNIAYGGPAGGARISLGF GDTTHSGTTITTPGIINVEETSFISNRAEKSNAGALYMDCYGPSCNVSNSTFYGNYAKGVGAAIQHVGWQPSNGDQGKTT VRFNNVTFAENTPGSTLFGSGFDIRNSIFYSKTERTFCSDQSSNGNNLIEYSAAGGLFHSSLTAGLARATDPLLGAPAAN GGPTLTQLPAANSPVRNLGSGCRTIDQRGVARD
Sequences:
>Translated_513_residues MRSTLHATVVTAGLLALITTSAAIAAVPSVAQCTTPQPWAHSNAGVVVGNGTAASCTASALATAVAQGGYVTFNCGTRAA SIAVNQTINISASTPTVIDGQGKITLDGRQAARIFQVQNGNALSVRNLKLQNGSSVQPASNTQYAPGTWGGGAIKVSYRG KLEVINSQFLSNRSSIGGGAIFAGSDTDVTIVKSSFSKNTSWLGGALYTQLSRLTIVNSEFVGNQAINAPAGFPDADQFG NSGAIDTDGASLAGYLNATAGGATLSVCGTVVRNNSAANSGGGATLWAYAPDTIDVRYSTFANNIAYGGPAGGARISLGF GDTTHSGTTITTPGIINVEETSFISNRAEKSNAGALYMDCYGPSCNVSNSTFYGNYAKGVGAAIQHVGWQPSNGDQGKTT VRFNNVTFAENTPGSTLFGSGFDIRNSIFYSKTERTFCSDQSSNGNNLIEYSAAGGLFHSSLTAGLARATDPLLGAPAAN GGPTLTQLPAANSPVRNLGSGCRTIDQRGVARD >Mature_513_residues MRSTLHATVVTAGLLALITTSAAIAAVPSVAQCTTPQPWAHSNAGVVVGNGTAASCTASALATAVAQGGYVTFNCGTRAA SIAVNQTINISASTPTVIDGQGKITLDGRQAARIFQVQNGNALSVRNLKLQNGSSVQPASNTQYAPGTWGGGAIKVSYRG KLEVINSQFLSNRSSIGGGAIFAGSDTDVTIVKSSFSKNTSWLGGALYTQLSRLTIVNSEFVGNQAINAPAGFPDADQFG NSGAIDTDGASLAGYLNATAGGATLSVCGTVVRNNSAANSGGGATLWAYAPDTIDVRYSTFANNIAYGGPAGGARISLGF GDTTHSGTTITTPGIINVEETSFISNRAEKSNAGALYMDCYGPSCNVSNSTFYGNYAKGVGAAIQHVGWQPSNGDQGKTT VRFNNVTFAENTPGSTLFGSGFDIRNSIFYSKTERTFCSDQSSNGNNLIEYSAAGGLFHSSLTAGLARATDPLLGAPAAN GGPTLTQLPAANSPVRNLGSGCRTIDQRGVARD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52259; Mature: 52259
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTLHATVVTAGLLALITTSAAIAAVPSVAQCTTPQPWAHSNAGVVVGNGTAASCTASA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEECCCCCHHHHHH LATAVAQGGYVTFNCGTRAASIAVNQTINISASTPTVIDGQGKITLDGRQAARIFQVQNG HHHHHHCCCEEEEECCCCEEEEEEEEEEEEECCCCEEECCCCEEEECCCCEEEEEEECCC NALSVRNLKLQNGSSVQPASNTQYAPGTWGGGAIKVSYRGKLEVINSQFLSNRSSIGGGA CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEHHHHHCCCCCCCCCE IFAGSDTDVTIVKSSFSKNTSWLGGALYTQLSRLTIVNSEFVGNQAINAPAGFPDADQFG EEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHEEEEECHHCCCCCCCCCCCCCCHHHCC NSGAIDTDGASLAGYLNATAGGATLSVCGTVVRNNSAANSGGGATLWAYAPDTIDVRYST CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEHH FANNIAYGGPAGGARISLGFGDTTHSGTTITTPGIINVEETSFISNRAEKSNAGALYMDC HHCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCEEEECHHHHHHHHCCCCCCCEEEEEE YGPSCNVSNSTFYGNYAKGVGAAIQHVGWQPSNGDQGKTTVRFNNVTFAENTPGSTLFGS ECCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEECCCCCCCEECC GFDIRNSIFYSKTERTFCSDQSSNGNNLIEYSAAGGLFHSSLTAGLARATDPLLGAPAAN CCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC GGPTLTQLPAANSPVRNLGSGCRTIDQRGVARD CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRSTLHATVVTAGLLALITTSAAIAAVPSVAQCTTPQPWAHSNAGVVVGNGTAASCTASA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEECCCCCHHHHHH LATAVAQGGYVTFNCGTRAASIAVNQTINISASTPTVIDGQGKITLDGRQAARIFQVQNG HHHHHHCCCEEEEECCCCEEEEEEEEEEEEECCCCEEECCCCEEEECCCCEEEEEEECCC NALSVRNLKLQNGSSVQPASNTQYAPGTWGGGAIKVSYRGKLEVINSQFLSNRSSIGGGA CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEHHHHHCCCCCCCCCE IFAGSDTDVTIVKSSFSKNTSWLGGALYTQLSRLTIVNSEFVGNQAINAPAGFPDADQFG EEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHEEEEECHHCCCCCCCCCCCCCCHHHCC NSGAIDTDGASLAGYLNATAGGATLSVCGTVVRNNSAANSGGGATLWAYAPDTIDVRYST CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEHH FANNIAYGGPAGGARISLGFGDTTHSGTTITTPGIINVEETSFISNRAEKSNAGALYMDC HHCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCEEEECHHHHHHHHCCCCCCCEEEEEE YGPSCNVSNSTFYGNYAKGVGAAIQHVGWQPSNGDQGKTTVRFNNVTFAENTPGSTLFGS ECCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEECCCCCCCEECC GFDIRNSIFYSKTERTFCSDQSSNGNNLIEYSAAGGLFHSSLTAGLARATDPLLGAPAAN CCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC GGPTLTQLPAANSPVRNLGSGCRTIDQRGVARD CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA