Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21245030
Identifier: 21245030
GI number: 21245030
Start: 5103841
End: 5104338
Strand: Direct
Name: 21245030
Synonym: XAC4318
Alternate gene names: NA
Gene position: 5103841-5104338 (Clockwise)
Preceding gene: 77748774
Following gene: 21245033
Centisome position: 98.61
GC content: 66.27
Gene sequence:
>498_bases ATGGCTGCAGTGTTGGAGTCTCACCTCATGAGGAGTTGTCAGATGCCCTGGAAATCCACCCTTGCCATGCTTGCCCTGTC CACCGCCGCGCTGCCGGCGCTGGCGCAGTCCGACCGTCAGGTGGTCGAAGACATGCTCACCCGCTCGGCCAATGTCTGCC CCGGCCACAGCACCGAACGCACCACACCCACCGTCAAGGCCGTCCCGGTCGGCGCGCTGCGCGTGATGCTGGAACGCGGC CTGGTCATGTGCCCAGACCGTCGCCTGGACGCCGCAGCACCGGCCGTGTTCTACGGGCGCCTGGGCGTGTTCGCCTGGAA CCCGGAAGTGAAAGCCGGATCCACCGTCATCGCCAAACAGATCGACAGCATGACCCGCAAGGACGACTACCCCACCGACA CCCTGGTGTGGGACGCCAAGGGCAGCGCGCTCACGCAGCAGACCGTGCCGATGTTCGAACCCAGGCCGGGTGCGGCGGTG TTGTACAAGGTGCGTTGA
Upstream 100 bases:
>100_bases AGGGCATCGCCTGCACGGCGTCGCCCTCACCCGCCTTCTCGGCGCTTAACGCAGGGGTTGCTAGCATCCGGGCGCGTCAC TGGCAGCAGCCTGCACGTGA
Downstream 100 bases:
>100_bases GGCCGACGCGATTGCGCGCGGCGCCCAGTCAGGCCCTGGCGCCCCGCTGCACGCGCGCATCGGCTGCATCGGCCGGGCCA TCGCCGCCGAGCCGCCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAAVLESHLMRSCQMPWKSTLAMLALSTAALPALAQSDRQVVEDMLTRSANVCPGHSTERTTPTVKAVPVGALRVMLERG LVMCPDRRLDAAAPAVFYGRLGVFAWNPEVKAGSTVIAKQIDSMTRKDDYPTDTLVWDAKGSALTQQTVPMFEPRPGAAV LYKVR
Sequences:
>Translated_165_residues MAAVLESHLMRSCQMPWKSTLAMLALSTAALPALAQSDRQVVEDMLTRSANVCPGHSTERTTPTVKAVPVGALRVMLERG LVMCPDRRLDAAAPAVFYGRLGVFAWNPEVKAGSTVIAKQIDSMTRKDDYPTDTLVWDAKGSALTQQTVPMFEPRPGAAV LYKVR >Mature_164_residues AAVLESHLMRSCQMPWKSTLAMLALSTAALPALAQSDRQVVEDMLTRSANVCPGHSTERTTPTVKAVPVGALRVMLERGL VMCPDRRLDAAAPAVFYGRLGVFAWNPEVKAGSTVIAKQIDSMTRKDDYPTDTLVWDAKGSALTQQTVPMFEPRPGAAVL YKVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17944; Mature: 17813
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVLESHLMRSCQMPWKSTLAMLALSTAALPALAQSDRQVVEDMLTRSANVCPGHSTER CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TTPTVKAVPVGALRVMLERGLVMCPDRRLDAAAPAVFYGRLGVFAWNPEVKAGSTVIAKQ CCCCEEECCHHHHHHHHHCCCEECCCCCCCHHCCHHHHHCEEEEEECCCCCCCCHHHHHH IDSMTRKDDYPTDTLVWDAKGSALTQQTVPMFEPRPGAAVLYKVR HHHHHHCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure AAVLESHLMRSCQMPWKSTLAMLALSTAALPALAQSDRQVVEDMLTRSANVCPGHSTER HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TTPTVKAVPVGALRVMLERGLVMCPDRRLDAAAPAVFYGRLGVFAWNPEVKAGSTVIAKQ CCCCEEECCHHHHHHHHHCCCEECCCCCCCHHCCHHHHHCEEEEEECCCCCCCCHHHHHH IDSMTRKDDYPTDTLVWDAKGSALTQQTVPMFEPRPGAAVLYKVR HHHHHHCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA