Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is Y4JJ
Identifier: 21245026
GI number: 21245026
Start: 5099881
End: 5100135
Strand: Direct
Name: Y4JJ
Synonym: XAC4314
Alternate gene names: NA
Gene position: 5099881-5100135 (Clockwise)
Preceding gene: 21245025
Following gene: 21245027
Centisome position: 98.54
GC content: 63.53
Gene sequence:
>255_bases ATGCCTTCTTTCACCGTCCGCAATATCCCAGACGACGTGCATCGCGCGATCCGCGCGCGGGCTGCACTTCATGGCCGCAG CACCGAAGCGGAGATCCGCGCAATCCTTGAATTGGCGGCCAAACCCGCAGACCGGGTCAAACTCGGCTCACTGCTGGTGA GCATCGGCCGCGACGCCGGCCTGACCGCAAAAGAGGCCAATGCCTTCGACAAGCTGCGCGGCAAGGCGGCGATCAAGCCG ATCGGTCTGAAGTGA
Upstream 100 bases:
>100_bases AATGCGGGAATGACTGCATCCGATACCGGGCGTGCTGACGTTGCCTGAGTGCTTGCACTTCTCTAAAGTGCAAGCACCCT GATGTCACCGGGAGGGCCAT
Downstream 100 bases:
>100_bases TCCTGCTCGATACCAATGTCATCTCCGAACTTTGGCGGCCTCAGCCTAATCCGCAGGTCGTCGCCTGGATCGATGCACAA GCTGTCGAGACACTGTTCCT
Product: plasmid stability protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MPSFTVRNIPDDVHRAIRARAALHGRSTEAEIRAILELAAKPADRVKLGSLLVSIGRDAGLTAKEANAFDKLRGKAAIKP IGLK
Sequences:
>Translated_84_residues MPSFTVRNIPDDVHRAIRARAALHGRSTEAEIRAILELAAKPADRVKLGSLLVSIGRDAGLTAKEANAFDKLRGKAAIKP IGLK >Mature_83_residues PSFTVRNIPDDVHRAIRARAALHGRSTEAEIRAILELAAKPADRVKLGSLLVSIGRDAGLTAKEANAFDKLRGKAAIKPI GLK
Specific function: Involved in plasmid stability (Potential) [H]
COG id: COG4691
COG function: function code R; Plasmid stability protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To P.syringae pv tomato plasmid stability protein stbC [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013321 - InterPro: IPR010985 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8997; Mature: 8865
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFTVRNIPDDVHRAIRARAALHGRSTEAEIRAILELAAKPADRVKLGSLLVSIGRDAG CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC LTAKEANAFDKLRGKAAIKPIGLK CCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PSFTVRNIPDDVHRAIRARAALHGRSTEAEIRAILELAAKPADRVKLGSLLVSIGRDAG CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC LTAKEANAFDKLRGKAAIKPIGLK CCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]