Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21245025
Identifier: 21245025
GI number: 21245025
Start: 5098629
End: 5099735
Strand: Direct
Name: 21245025
Synonym: XAC4313
Alternate gene names: NA
Gene position: 5098629-5099735 (Clockwise)
Preceding gene: 21245024
Following gene: 21245026
Centisome position: 98.51
GC content: 69.56
Gene sequence:
>1107_bases ATGTTACGGCGTGACTGGACCGTCCCGGCCGCCACGCAGCTTGCACACGCCCAGGATCACTACCACGCGCTCAACCCGAC CGCCGCTGCCGCGATGGCGCGGCAGGTGCTGGAAGCCACCCGCACTCTGGCCGAGCAACCAGGCCGCGGCCGCGTTGGCC GCGTGCCCGGCACCCGCGAATGGGTGGTCAAGCAGACCCCGTATGTGTTGGTCTACCGCGTGCGTGACGGCGCCCTGCAG GTGTTGCACGTCCATCTGGATGCCAGCGACTGGCTGCCACGCACCGAACCGCTGATCGAACGCATCGAACCGTGGATTGC CGCGCTGATCAGCGCGCTGCTGCACGTGCTGATGTTGCTGATCCTGCTGTCGGCCTCCACCCCCACCATGACCCCGCCGC AGGGCTCGGCCAGCGGTGGACGCATCAAGGTGGATTTCGTCGGCGACACCTCGCAGCCCGATGAGCCGGTGCCCTCGCCC ACCCCGGTGCCACCGACACCCACGCCCGTGCAGCCGCCACCGGCTGCCTCGCCGGTACAGTCCACGCTGGTGCAGCAAGC CAAACATCCGGTGCCGCCGCAGGGCGATACCGCGCAAGGCAGCCTGGCCGAACGCCGCCAGCCGCGTCGCCAGCAACGGC CCACGCCGCCGCAACCGCCCGCACCGCCGGCGGCATCCGCCCAGCGCCGCCCGGATACCTGGACCGGCCGCCCGCCGGGC ATGCTCGACGAACCCGCCGACGGCGCCGAAGACGGCATGGCCAACACCCCCACCATCAGCCAGGGCCGCCGCAACGACCG CAACAACGCCCAGCCCAGCCTGGATATCGGCGGCTTCCAGGTCTATTACGACGTGCGCAGCGAAACCCAGCTGCGCGCCT GGAAAGAACAAGGCATGCAGGAAATCGCCATCATCCTGCCCGGCACCCAGCAACGCATGATCTGCCCGCTGGATGTCGCG CTCAAACGCGGCTCCAGCAAATGCCGCCTGCTGCCACCGGATTCGCCGGAGCTGAAGACCATCGGCGACGCGCGCGAGGT CATCAACATGATGGAGGTCTACCGCCAGGGCGAACCGGTCTGGCGTGGGCCGGGGCCGTATCGGTGA
Upstream 100 bases:
>100_bases AGCTTCCTGGCCGCGGTGCAGGAAGGGATTGCCGCTGCAGATCAGGGCGCGTTGACGGCTCCGGCACAGGTGAGCGCACT GTTCGCCGGATGGGGCGTTG
Downstream 100 bases:
>100_bases GGGGTGGGGTGGGGCCAGGTTGGCCCCGGATTCCACTTACCTGCTAATGCGGGAATGACTGCATCCGATACCGGGCGTGC TGACGTTGCCTGAGTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MLRRDWTVPAATQLAHAQDHYHALNPTAAAAMARQVLEATRTLAEQPGRGRVGRVPGTREWVVKQTPYVLVYRVRDGALQ VLHVHLDASDWLPRTEPLIERIEPWIAALISALLHVLMLLILLSASTPTMTPPQGSASGGRIKVDFVGDTSQPDEPVPSP TPVPPTPTPVQPPPAASPVQSTLVQQAKHPVPPQGDTAQGSLAERRQPRRQQRPTPPQPPAPPAASAQRRPDTWTGRPPG MLDEPADGAEDGMANTPTISQGRRNDRNNAQPSLDIGGFQVYYDVRSETQLRAWKEQGMQEIAIILPGTQQRMICPLDVA LKRGSSKCRLLPPDSPELKTIGDAREVINMMEVYRQGEPVWRGPGPYR
Sequences:
>Translated_368_residues MLRRDWTVPAATQLAHAQDHYHALNPTAAAAMARQVLEATRTLAEQPGRGRVGRVPGTREWVVKQTPYVLVYRVRDGALQ VLHVHLDASDWLPRTEPLIERIEPWIAALISALLHVLMLLILLSASTPTMTPPQGSASGGRIKVDFVGDTSQPDEPVPSP TPVPPTPTPVQPPPAASPVQSTLVQQAKHPVPPQGDTAQGSLAERRQPRRQQRPTPPQPPAPPAASAQRRPDTWTGRPPG MLDEPADGAEDGMANTPTISQGRRNDRNNAQPSLDIGGFQVYYDVRSETQLRAWKEQGMQEIAIILPGTQQRMICPLDVA LKRGSSKCRLLPPDSPELKTIGDAREVINMMEVYRQGEPVWRGPGPYR >Mature_368_residues MLRRDWTVPAATQLAHAQDHYHALNPTAAAAMARQVLEATRTLAEQPGRGRVGRVPGTREWVVKQTPYVLVYRVRDGALQ VLHVHLDASDWLPRTEPLIERIEPWIAALISALLHVLMLLILLSASTPTMTPPQGSASGGRIKVDFVGDTSQPDEPVPSP TPVPPTPTPVQPPPAASPVQSTLVQQAKHPVPPQGDTAQGSLAERRQPRRQQRPTPPQPPAPPAASAQRRPDTWTGRPPG MLDEPADGAEDGMANTPTISQGRRNDRNNAQPSLDIGGFQVYYDVRSETQLRAWKEQGMQEIAIILPGTQQRMICPLDVA LKRGSSKCRLLPPDSPELKTIGDAREVINMMEVYRQGEPVWRGPGPYR
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40337; Mature: 40337
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRDWTVPAATQLAHAQDHYHALNPTAAAAMARQVLEATRTLAEQPGRGRVGRVPGTRE CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC WVVKQTPYVLVYRVRDGALQVLHVHLDASDWLPRTEPLIERIEPWIAALISALLHVLMLL EEEECCCEEEEEEECCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILLSASTPTMTPPQGSASGGRIKVDFVGDTSQPDEPVPSPTPVPPTPTPVQPPPAASPVQ HHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH STLVQQAKHPVPPQGDTAQGSLAERRQPRRQQRPTPPQPPAPPAASAQRRPDTWTGRPPG HHHHHHHCCCCCCCCCCCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MLDEPADGAEDGMANTPTISQGRRNDRNNAQPSLDIGGFQVYYDVRSETQLRAWKEQGMQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCHHHHHHHHCCCE EIAIILPGTQQRMICPLDVALKRGSSKCRLLPPDSPELKTIGDAREVINMMEVYRQGEPV EEEEEECCCCCCEECHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC WRGPGPYR CCCCCCCC >Mature Secondary Structure MLRRDWTVPAATQLAHAQDHYHALNPTAAAAMARQVLEATRTLAEQPGRGRVGRVPGTRE CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC WVVKQTPYVLVYRVRDGALQVLHVHLDASDWLPRTEPLIERIEPWIAALISALLHVLMLL EEEECCCEEEEEEECCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILLSASTPTMTPPQGSASGGRIKVDFVGDTSQPDEPVPSPTPVPPTPTPVQPPPAASPVQ HHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH STLVQQAKHPVPPQGDTAQGSLAERRQPRRQQRPTPPQPPAPPAASAQRRPDTWTGRPPG HHHHHHHCCCCCCCCCCCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MLDEPADGAEDGMANTPTISQGRRNDRNNAQPSLDIGGFQVYYDVRSETQLRAWKEQGMQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCHHHHHHHHCCCE EIAIILPGTQQRMICPLDVALKRGSSKCRLLPPDSPELKTIGDAREVINMMEVYRQGEPV EEEEEECCCCCCEECHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC WRGPGPYR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA