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The map label for this gene is kdpD [C]

Identifier: 21245000

GI number: 21245000

Start: 5059882

End: 5061138

Strand: Direct

Name: kdpD [C]

Synonym: XAC4283

Alternate gene names: 21245000

Gene position: 5059882-5061138 (Clockwise)

Preceding gene: 21244999

Following gene: 21245004

Centisome position: 97.77

GC content: 64.44

Gene sequence:

>1257_bases
TTGGAGGCACTCATGGATCCACTGCCTCCCGCATTGCGCGCCGACATCGCGCGTGTTGGCCGGCTCTCCTCGGTCCCCGA
CGTATTGAGCGTCCTCACCCGTCTGACCGGGATGGGATTTGCCGTCGTCGCCCGCGTCACCGACGCGCGCTGGATCACCT
GTCAGGTGCACGATGCATTGTCCTTTGGCCTGCGGCCCGGCGACGAGCTGCCGCTGGCCACCACGTTTTGCGACAGCGTA
CGGGTGCGAGGCAATGCCGTGTGGTTCGGGCATGCATCGGATGACCCGATCTATCGCGATCACCCCTCGCCGCGGCTCTA
CGGCTTCGAGAGCTACGTCTCGGTGCCGATCAAGTTCGACGACGGCAGCGTGTTCGGCACCTTGTGCGCGCTGGATCCGC
AGCCGCGCGTCATGGACGCACCGCTGGTGGAAAAGGTCGAACTGCTCGCGCAGTTGCTGGCCGCCCAGATCCAGGCCGAG
CAACGCGCCGAAGAAAGCGCGCTGGAATCGCGGCGCGCCCGCAGCGAGCTGGGCCGCGTGGGCGCCTCGGCGCGCTTGCG
CGAAGAATTCATCGGCATTCTCGGGCACGACCTACGCAACCCATTGCAGTCCATGCATGCGGTGGTGGATATGCTGTCCA
TCGACCAACTCAACCATCGCTACGGCAGCTCCATTCGCTCGCTGCAGCGTAGCCTGCGGCGCATGGAAGAACTGATCGAT
TTCGCCTGCGATTTCGCTCGCGGCATCGAACTCGATTGGTTGCAGCTGGACTATGGCGACGGGAGCGACCTGCTCGATGC
ACTCTCCCAGGTCGTGGACGAAACCCGCGCCGCCTATCCCAACCAGGTGCTGTCCACGCACGTGGCCATCGACGAGCCAG
TACACGGCGATGCGATCCGTCTGGCGCAGATGTTCGGCAGCCTGATGATCAACGCCGTCGTGCAAGGGCCGCAAAGTTCG
TTGATCAAGGCGGTCGCGGTCACCGAACATGGCCGGCTACGCATCGAAGTCTGCAATCTGGATGGGATCGATCCGCGTCG
GCTGGATGTGCTGCATGCTTCCACCCATGTGCATACCGGCGGACGTGCGCTACCGGATGTCGATCTGGGCCTGCATATGG
CGGCGCAGATCGCAAAGGCCCATCAGGGCGAATTACGCATCATCAGCGGCAAGGACGGCACCTGCTTCCGCGTGGAGCTG
GCCTGCACACGTCCGCGCGGACGACTGCATCTGGTCGGCACCTCGGCGCCGACCTGA

Upstream 100 bases:

>100_bases
CGGGCGCCGTCAGACAGGCGTATCGTGGTGTCTGTGAGACAGCGGCGCACCACACAACCGGGCGCAACCGCGGTCCTGTA
AACTGGCAAGCGTCCACTCT

Downstream 100 bases:

>100_bases
ATGCGTTACGCAGCGACTATCGTCCCGCAAACAAGTGCGCCAAAGGTGGCGCTCCAGCCGCATGCGGCATGCCGGCCACA
CGTCCTCTGGCGCCGCATTG

Product: sensor histidine kinase

Products: NA

Alternate protein names: GAF Sensor Signal Transduction Histidine Kinase; Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; GAF Domain Protein; Two-Component Regulatory System Sensor Kinase Protein; PAS Sensor Protein; GAF Domain-Containing Protein; Two Component Transcriptional Regulator LuxR Family; Bacteriophytochrome; Two-Component Regulator Sensor Histidine Kinase Protein; Two-Component System Sensor Histidine Kinase

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MEALMDPLPPALRADIARVGRLSSVPDVLSVLTRLTGMGFAVVARVTDARWITCQVHDALSFGLRPGDELPLATTFCDSV
RVRGNAVWFGHASDDPIYRDHPSPRLYGFESYVSVPIKFDDGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAE
QRAEESALESRRARSELGRVGASARLREEFIGILGHDLRNPLQSMHAVVDMLSIDQLNHRYGSSIRSLQRSLRRMEELID
FACDFARGIELDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIRLAQMFGSLMINAVVQGPQSS
LIKAVAVTEHGRLRIEVCNLDGIDPRRLDVLHASTHVHTGGRALPDVDLGLHMAAQIAKAHQGELRIISGKDGTCFRVEL
ACTRPRGRLHLVGTSAPT

Sequences:

>Translated_418_residues
MEALMDPLPPALRADIARVGRLSSVPDVLSVLTRLTGMGFAVVARVTDARWITCQVHDALSFGLRPGDELPLATTFCDSV
RVRGNAVWFGHASDDPIYRDHPSPRLYGFESYVSVPIKFDDGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAE
QRAEESALESRRARSELGRVGASARLREEFIGILGHDLRNPLQSMHAVVDMLSIDQLNHRYGSSIRSLQRSLRRMEELID
FACDFARGIELDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIRLAQMFGSLMINAVVQGPQSS
LIKAVAVTEHGRLRIEVCNLDGIDPRRLDVLHASTHVHTGGRALPDVDLGLHMAAQIAKAHQGELRIISGKDGTCFRVEL
ACTRPRGRLHLVGTSAPT
>Mature_418_residues
MEALMDPLPPALRADIARVGRLSSVPDVLSVLTRLTGMGFAVVARVTDARWITCQVHDALSFGLRPGDELPLATTFCDSV
RVRGNAVWFGHASDDPIYRDHPSPRLYGFESYVSVPIKFDDGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAE
QRAEESALESRRARSELGRVGASARLREEFIGILGHDLRNPLQSMHAVVDMLSIDQLNHRYGSSIRSLQRSLRRMEELID
FACDFARGIELDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIRLAQMFGSLMINAVVQGPQSS
LIKAVAVTEHGRLRIEVCNLDGIDPRRLDVLHASTHVHTGGRALPDVDLGLHMAAQIAKAHQGELRIISGKDGTCFRVEL
ACTRPRGRLHLVGTSAPT

Specific function: Member Of The Two-Component Regulatory System Kdpd/Kdpe Involved In The Regulation Of The Kdp Operon. Kdpd May Function As A Membrane-Associated Protein Kinase That Phosphorylates Kdpe In Response To Environmental Signals. [C]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.3.- [C]

Molecular weight: Translated: 45802; Mature: 45802

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALMDPLPPALRADIARVGRLSSVPDVLSVLTRLTGMGFAVVARVTDARWITCQVHDAL
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHEEEEECCCEEEEEEEEHHH
SFGLRPGDELPLATTFCDSVRVRGNAVWFGHASDDPIYRDHPSPRLYGFESYVSVPIKFD
HCCCCCCCCCCCHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCEECCHHHEEEEEEEC
DGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAEQRAEESALESRRARSELGRV
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASARLREEFIGILGHDLRNPLQSMHAVVDMLSIDQLNHRYGSSIRSLQRSLRRMEELID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FACDFARGIELDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIR
HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCHHHH
LAQMFGSLMINAVVQGPQSSLIKAVAVTEHGRLRIEVCNLDGIDPRRLDVLHASTHVHTG
HHHHHHHHHHHHHHCCCHHHHHHHHEEECCCEEEEEEECCCCCCCHHEEEEECCCEEECC
GRALPDVDLGLHMAAQIAKAHQGELRIISGKDGTCFRVELACTRPRGRLHLVGTSAPT
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MEALMDPLPPALRADIARVGRLSSVPDVLSVLTRLTGMGFAVVARVTDARWITCQVHDAL
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHEEEEECCCEEEEEEEEHHH
SFGLRPGDELPLATTFCDSVRVRGNAVWFGHASDDPIYRDHPSPRLYGFESYVSVPIKFD
HCCCCCCCCCCCHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCEECCHHHEEEEEEEC
DGSVFGTLCALDPQPRVMDAPLVEKVELLAQLLAAQIQAEQRAEESALESRRARSELGRV
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASARLREEFIGILGHDLRNPLQSMHAVVDMLSIDQLNHRYGSSIRSLQRSLRRMEELID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FACDFARGIELDWLQLDYGDGSDLLDALSQVVDETRAAYPNQVLSTHVAIDEPVHGDAIR
HHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCHHHH
LAQMFGSLMINAVVQGPQSSLIKAVAVTEHGRLRIEVCNLDGIDPRRLDVLHASTHVHTG
HHHHHHHHHHHHHHCCCHHHHHHHHEEECCCEEEEEEECCCCCCCHHEEEEECCCEEECC
GRALPDVDLGLHMAAQIAKAHQGELRIISGKDGTCFRVELACTRPRGRLHLVGTSAPT
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA