Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244911
Identifier: 21244911
GI number: 21244911
Start: 4935364
End: 4938072
Strand: Direct
Name: 21244911
Synonym: XAC4194
Alternate gene names: NA
Gene position: 4935364-4938072 (Clockwise)
Preceding gene: 21244909
Following gene: 21244914
Centisome position: 95.36
GC content: 63.71
Gene sequence:
>2709_bases TTGGCAGTGCCGTCGATACGCGTGTCGCACCCATCCAGAAACCAGCACCGCATGTGTGGAGAGCCCATGACCGTTCAAGC AAGAAGCCAGATCTCGTCGAGTGCGCCGTCGCGCATGCGCTCCCTGCTGATCATCGTGGCCGGCCTCTTCGCCGCCGACG GTGTCTGGGCCTGTACCACGCCAGTGTCGGTGTGCGAACGCGACAGCGCCGGTGCGTTTGCGCTGATCCGCTCGGAAGCA CCTGCCACGGTCGTGGTCGATGCCTCGGCCGATTCCGCGGTGCGATCGGCGGCCGACAATTTCGCAGCCGACCTGCAACG GGTTGCCGGCCGCACCAGTGACGTGAGCACCGATCTGGCAGGCGTCCGCGGAACGGCCGTGATCGTTGGCACGCTCGGCC AGAGTCCGATCATCGATGCGCTCATCGCCGCCGGGAAAATCGACAGGCGCGCCTTGCTGCAGCGCTGGGAGGCGTACACG CAAATTGTCGTCGATCGCCCCACGCCGCAGATCGATCGGGCGCTCGTCATTGTCGGCGCCGATCGCCGTGGCGCGGTCTT CGGTACCTACGATGTCTCGGAAAAGATTGGCGTGTCGCCGTGGTACTGGTTCGCCGACGTCGCAACGGCGCATCGATCCA ACCTGTTCATCACCCGCGGCAGCGTGTCCGATGCGCCGAAGGTGCGCTACCGCGGATTGTTCATCAACGACGAAGACCCT GCCTTGAAGGGCTGGGCGACGAAGAAATTCGGTGGCGTCAATGCGAAGATGTACGCGCATGTCTTCGAGCTGGGCCTGCG CATGAAGGCCAACTATCTGTGGCCGGCGATGTGGGGCAAGGCATTCAATGTCGATGATCCCGACAACATGGTGCTGGCCG ATCAGATGGGCATCGTCATGGGCACCTCCCATCATGAGCCGATGATGCGCGCGCAGAAGGAGTGGCACCTCAAGAGCATT CCCAACAGCGGCGGCGCCTGGGACTACACCAGCAATGCCGCCAACCTGCGCGCCTTCTGGAAGGGCGGCATTGCGCGGAT GATGTCCAAGGGCGGCGGTCAACGCTACGACAGCCTGGTGACCGTGGGCATGCGCGGCGATGGCGACGAACCGATGGCCG AGAGCACGGCCAGCCATTTGCTGGAAAAGGTTGTGGCCGACCAGCGCGCCATCATTGCCGATGTGACGAAGGCGCCAGCC GCGCAAACGCCGCAGGTGTGGGCGCTTTACAAGGAAGTGCAGGGCTACTACGACCACGGAATGCAGGTTCCCGACGATGT CACGCTGCTGTTTTCCGACGACAACTGGGGCCAGATCCGCCGTCTTCCGGTCACCGACCTGCAGCGCACCGGCGGGTATG GCGTGTACTACCACTTCGATTATGTGGGGGTGCCGCGCAACTACAAATGGATCAATACCAATCAGATCGAAAAGATCTGG CAGCAGATGGATCTGGCCTATCAACGCGGCGCACGGCAACTGTGGGTGGTCAACGTCGGCGATATCAAGCCGATGGAATA TCCACTGAGCTTTTTCCTGAAGATGGCCTGGAATCCGCAAGCGATGACGCCCGGCGCACTTGCGGCGTATCCGCAGCAAT GGGCGCAGGAATCGTTCGACGCGGCGCATGCCGCGCGTATCGCAGAGCTGATCACCCGCTACAGCATGTTGGTTGCACGG AGAAAGCCGGAATTGGTCGATCAGGACAGCTTCGCCCTGGGCGAAGGTGCGCCGGCCAAGCTGGATGGCGGCGAGTTCGG CGCGATCGTTGCGCAATGGCAGGCGCTCGAGCAGCGCATGCTGGGCGTCAAGGCGAGTTTGCCCGCCGACCAGCAAGACG CCTATTACCAGCTGATCGAATACCCCATCGCGGCCGTCTCCAATCTCTACCAGCTCTATTACGCGGCCGCATGGAACAAG CGCCTGGCCGCACGCAACGATGCACGTGCCAATTACTTCGCCGACATGGTCGAAACCACCTTCGAGCGCGATAAGGCCCT GACACAGCGTTACCACGCGATCAACGGCGGCAAATGGGACGGCATGATGAATCAGGTCCACATGAGCTATGTGATCTGGA ACGACCCCACCCAGCAGTCCATGCCCTCGATCAGCCGCGTCGGCGGCGATACGCCGCCCGACCGGATCGCACGCTCCATC GCGTTCGCACCGCCTGCGCCGCAAACGCCAGGGGTCCTCTCGCTCGAAGCGCCCATGTTCTCGCGGGTCATCGCCAACAA GGGGCTGCAATGGACGTCGATCCCCGCGCTGGGACGCACCCAGGGCGCCCTGGTCGCGCTGCCGCAGGGGCAGCCTGCCA CCACGGCCGAAGACCGTGTCGCAGTGGAGTACGACGTGGTGGTCTCCACGCCGGGCCCTGCAACGCTCGGCCTGTATCTT GCGCCCACACTGGAGACGTCCAACCGCGGGCCGCTCCGCCTCGGCGTCTCCATCGACGACGGTCCGGTGACCACCGTCAA TTGGGAGCTGCACCCGACCGGCGGGGCGCAGAACACGCCCGCCGAAAAAGCCTGGGCAACCGCGGTACGGGACAATGCAG TGTTCGTATCGGTGCAGATGGGCGCGGTGGCGAAGGGTCGGCACACGATCAAGGTCTTCAGGATCGACGACAACATCGTC CTGGAGAAGCTCGTGCTGAGCACCGTGCCGGTGCCTGCGTCCTATCTGGGGCCAGGGCCGACACGCTGA
Upstream 100 bases:
>100_bases GCAGTCACCTCACCGCGATGCGCGTCATCACAACGCGATGGAACGCACCCTCTCGTGCAGGCGCGGCGCATACCGGCGGT GCATCGGCCGCGCCCGCCGC
Downstream 100 bases:
>100_bases CGCAAGCCGGCAGGAGGGCGTCGCGAGCGCGCTCCCGCTGCTTCAGCCACCCATTGCCGCCGCCAGTGCTGACACGGCGA GCGACCCGCCATCAACCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 902; Mature: 901
Protein sequence:
>902_residues MAVPSIRVSHPSRNQHRMCGEPMTVQARSQISSSAPSRMRSLLIIVAGLFAADGVWACTTPVSVCERDSAGAFALIRSEA PATVVVDASADSAVRSAADNFAADLQRVAGRTSDVSTDLAGVRGTAVIVGTLGQSPIIDALIAAGKIDRRALLQRWEAYT QIVVDRPTPQIDRALVIVGADRRGAVFGTYDVSEKIGVSPWYWFADVATAHRSNLFITRGSVSDAPKVRYRGLFINDEDP ALKGWATKKFGGVNAKMYAHVFELGLRMKANYLWPAMWGKAFNVDDPDNMVLADQMGIVMGTSHHEPMMRAQKEWHLKSI PNSGGAWDYTSNAANLRAFWKGGIARMMSKGGGQRYDSLVTVGMRGDGDEPMAESTASHLLEKVVADQRAIIADVTKAPA AQTPQVWALYKEVQGYYDHGMQVPDDVTLLFSDDNWGQIRRLPVTDLQRTGGYGVYYHFDYVGVPRNYKWINTNQIEKIW QQMDLAYQRGARQLWVVNVGDIKPMEYPLSFFLKMAWNPQAMTPGALAAYPQQWAQESFDAAHAARIAELITRYSMLVAR RKPELVDQDSFALGEGAPAKLDGGEFGAIVAQWQALEQRMLGVKASLPADQQDAYYQLIEYPIAAVSNLYQLYYAAAWNK RLAARNDARANYFADMVETTFERDKALTQRYHAINGGKWDGMMNQVHMSYVIWNDPTQQSMPSISRVGGDTPPDRIARSI AFAPPAPQTPGVLSLEAPMFSRVIANKGLQWTSIPALGRTQGALVALPQGQPATTAEDRVAVEYDVVVSTPGPATLGLYL APTLETSNRGPLRLGVSIDDGPVTTVNWELHPTGGAQNTPAEKAWATAVRDNAVFVSVQMGAVAKGRHTIKVFRIDDNIV LEKLVLSTVPVPASYLGPGPTR
Sequences:
>Translated_902_residues MAVPSIRVSHPSRNQHRMCGEPMTVQARSQISSSAPSRMRSLLIIVAGLFAADGVWACTTPVSVCERDSAGAFALIRSEA PATVVVDASADSAVRSAADNFAADLQRVAGRTSDVSTDLAGVRGTAVIVGTLGQSPIIDALIAAGKIDRRALLQRWEAYT QIVVDRPTPQIDRALVIVGADRRGAVFGTYDVSEKIGVSPWYWFADVATAHRSNLFITRGSVSDAPKVRYRGLFINDEDP ALKGWATKKFGGVNAKMYAHVFELGLRMKANYLWPAMWGKAFNVDDPDNMVLADQMGIVMGTSHHEPMMRAQKEWHLKSI PNSGGAWDYTSNAANLRAFWKGGIARMMSKGGGQRYDSLVTVGMRGDGDEPMAESTASHLLEKVVADQRAIIADVTKAPA AQTPQVWALYKEVQGYYDHGMQVPDDVTLLFSDDNWGQIRRLPVTDLQRTGGYGVYYHFDYVGVPRNYKWINTNQIEKIW QQMDLAYQRGARQLWVVNVGDIKPMEYPLSFFLKMAWNPQAMTPGALAAYPQQWAQESFDAAHAARIAELITRYSMLVAR RKPELVDQDSFALGEGAPAKLDGGEFGAIVAQWQALEQRMLGVKASLPADQQDAYYQLIEYPIAAVSNLYQLYYAAAWNK RLAARNDARANYFADMVETTFERDKALTQRYHAINGGKWDGMMNQVHMSYVIWNDPTQQSMPSISRVGGDTPPDRIARSI AFAPPAPQTPGVLSLEAPMFSRVIANKGLQWTSIPALGRTQGALVALPQGQPATTAEDRVAVEYDVVVSTPGPATLGLYL APTLETSNRGPLRLGVSIDDGPVTTVNWELHPTGGAQNTPAEKAWATAVRDNAVFVSVQMGAVAKGRHTIKVFRIDDNIV LEKLVLSTVPVPASYLGPGPTR >Mature_901_residues AVPSIRVSHPSRNQHRMCGEPMTVQARSQISSSAPSRMRSLLIIVAGLFAADGVWACTTPVSVCERDSAGAFALIRSEAP ATVVVDASADSAVRSAADNFAADLQRVAGRTSDVSTDLAGVRGTAVIVGTLGQSPIIDALIAAGKIDRRALLQRWEAYTQ IVVDRPTPQIDRALVIVGADRRGAVFGTYDVSEKIGVSPWYWFADVATAHRSNLFITRGSVSDAPKVRYRGLFINDEDPA LKGWATKKFGGVNAKMYAHVFELGLRMKANYLWPAMWGKAFNVDDPDNMVLADQMGIVMGTSHHEPMMRAQKEWHLKSIP NSGGAWDYTSNAANLRAFWKGGIARMMSKGGGQRYDSLVTVGMRGDGDEPMAESTASHLLEKVVADQRAIIADVTKAPAA QTPQVWALYKEVQGYYDHGMQVPDDVTLLFSDDNWGQIRRLPVTDLQRTGGYGVYYHFDYVGVPRNYKWINTNQIEKIWQ QMDLAYQRGARQLWVVNVGDIKPMEYPLSFFLKMAWNPQAMTPGALAAYPQQWAQESFDAAHAARIAELITRYSMLVARR KPELVDQDSFALGEGAPAKLDGGEFGAIVAQWQALEQRMLGVKASLPADQQDAYYQLIEYPIAAVSNLYQLYYAAAWNKR LAARNDARANYFADMVETTFERDKALTQRYHAINGGKWDGMMNQVHMSYVIWNDPTQQSMPSISRVGGDTPPDRIARSIA FAPPAPQTPGVLSLEAPMFSRVIANKGLQWTSIPALGRTQGALVALPQGQPATTAEDRVAVEYDVVVSTPGPATLGLYLA PTLETSNRGPLRLGVSIDDGPVTTVNWELHPTGGAQNTPAEKAWATAVRDNAVFVSVQMGAVAKGRHTIKVFRIDDNIVL EKLVLSTVPVPASYLGPGPTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98764; Mature: 98633
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPSIRVSHPSRNQHRMCGEPMTVQARSQISSSAPSRMRSLLIIVAGLFAADGVWACTT CCCCCEEECCCCCCCHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECC PVSVCERDSAGAFALIRSEAPATVVVDASADSAVRSAADNFAADLQRVAGRTSDVSTDLA CHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHC GVRGTAVIVGTLGQSPIIDALIAAGKIDRRALLQRWEAYTQIVVDRPTPQIDRALVIVGA CCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEC DRRGAVFGTYDVSEKIGVSPWYWFADVATAHRSNLFITRGSVSDAPKVRYRGLFINDEDP CCCCCEEEEECCCHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEECCCCC ALKGWATKKFGGVNAKMYAHVFELGLRMKANYLWPAMWGKAFNVDDPDNMVLADQMGIVM CCCCCCCCCCCCCCHHHHHHHHHHCCCEECCEECHHHCCCCCCCCCCCCEEEECCCCEEE GTSHHEPMMRAQKEWHLKSIPNSGGAWDYTSNAANLRAFWKGGIARMMSKGGGQRYDSLV ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE TVGMRGDGDEPMAESTASHLLEKVVADQRAIIADVTKAPAAQTPQVWALYKEVQGYYDHG EEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC MQVPDDVTLLFSDDNWGQIRRLPVTDLQRTGGYGVYYHFDYVGVPRNYKWINTNQIEKIW CCCCCCEEEEEECCCCCCEEECCHHHHHHCCCEEEEEEEEEEECCCCCEECCCHHHHHHH QQMDLAYQRGARQLWVVNVGDIKPMEYPLSFFLKMAWNPQAMTPGALAAYPQQWAQESFD HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AAHAARIAELITRYSMLVARRKPELVDQDSFALGEGAPAKLDGGEFGAIVAQWQALEQRM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LGVKASLPADQQDAYYQLIEYPIAAVSNLYQLYYAAAWNKRLAARNDARANYFADMVETT HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FERDKALTQRYHAINGGKWDGMMNQVHMSYVIWNDPTQQSMPSISRVGGDTPPDRIARSI HHHHHHHHHHHHHCCCCCCCCHHHEEEEEEEEECCCCHHHCCHHHHCCCCCCHHHHHHHH AFAPPAPQTPGVLSLEAPMFSRVIANKGLQWTSIPALGRTQGALVALPQGQPATTAEDRV CCCCCCCCCCCEEEECCHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCE AVEYDVVVSTPGPATLGLYLAPTLETSNRGPLRLGVSIDDGPVTTVNWELHPTGGAQNTP EEEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCC AEKAWATAVRDNAVFVSVQMGAVAKGRHTIKVFRIDDNIVLEKLVLSTVPVPASYLGPGP HHHHHHHHCCCCEEEEEEEECCEECCCEEEEEEEECCHHHHHHHHHHCCCCCHHHCCCCC TR CC >Mature Secondary Structure AVPSIRVSHPSRNQHRMCGEPMTVQARSQISSSAPSRMRSLLIIVAGLFAADGVWACTT CCCCEEECCCCCCCHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECC PVSVCERDSAGAFALIRSEAPATVVVDASADSAVRSAADNFAADLQRVAGRTSDVSTDLA CHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHC GVRGTAVIVGTLGQSPIIDALIAAGKIDRRALLQRWEAYTQIVVDRPTPQIDRALVIVGA CCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEC DRRGAVFGTYDVSEKIGVSPWYWFADVATAHRSNLFITRGSVSDAPKVRYRGLFINDEDP CCCCCEEEEECCCHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEECCCCC ALKGWATKKFGGVNAKMYAHVFELGLRMKANYLWPAMWGKAFNVDDPDNMVLADQMGIVM CCCCCCCCCCCCCCHHHHHHHHHHCCCEECCEECHHHCCCCCCCCCCCCEEEECCCCEEE GTSHHEPMMRAQKEWHLKSIPNSGGAWDYTSNAANLRAFWKGGIARMMSKGGGQRYDSLV ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE TVGMRGDGDEPMAESTASHLLEKVVADQRAIIADVTKAPAAQTPQVWALYKEVQGYYDHG EEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC MQVPDDVTLLFSDDNWGQIRRLPVTDLQRTGGYGVYYHFDYVGVPRNYKWINTNQIEKIW CCCCCCEEEEEECCCCCCEEECCHHHHHHCCCEEEEEEEEEEECCCCCEECCCHHHHHHH QQMDLAYQRGARQLWVVNVGDIKPMEYPLSFFLKMAWNPQAMTPGALAAYPQQWAQESFD HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AAHAARIAELITRYSMLVARRKPELVDQDSFALGEGAPAKLDGGEFGAIVAQWQALEQRM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LGVKASLPADQQDAYYQLIEYPIAAVSNLYQLYYAAAWNKRLAARNDARANYFADMVETT HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FERDKALTQRYHAINGGKWDGMMNQVHMSYVIWNDPTQQSMPSISRVGGDTPPDRIARSI HHHHHHHHHHHHHCCCCCCCCHHHEEEEEEEEECCCCHHHCCHHHHCCCCCCHHHHHHHH AFAPPAPQTPGVLSLEAPMFSRVIANKGLQWTSIPALGRTQGALVALPQGQPATTAEDRV CCCCCCCCCCCEEEECCHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCE AVEYDVVVSTPGPATLGLYLAPTLETSNRGPLRLGVSIDDGPVTTVNWELHPTGGAQNTP EEEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCC AEKAWATAVRDNAVFVSVQMGAVAKGRHTIKVFRIDDNIVLEKLVLSTVPVPASYLGPGP HHHHHHHHCCCCEEEEEEEECCEECCCEEEEEEEECCHHHHHHHHHHCCCCCHHHCCCCC TR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA