Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244899
Identifier: 21244899
GI number: 21244899
Start: 4918652
End: 4919242
Strand: Direct
Name: 21244899
Synonym: XAC4182
Alternate gene names: NA
Gene position: 4918652-4919242 (Clockwise)
Preceding gene: 21244897
Following gene: 21244901
Centisome position: 95.04
GC content: 66.16
Gene sequence:
>591_bases ATGGCGCGACGTTTCCCCTGGCTCTGGATGGGCCTGCTGGTGGCCTGTGCATTGATTGCGATGCTGGCGTGGCAGAACCG GCAGCTGCGCATGCAGCAGCAGTGGCTGCAGACGCGCATCAGCGCGCCATATGACGGCATGTACGTACCGCGTATCGAAG CGACCGATGGCGATGGCCGGCGGCACCTGCTCGGTGCGCCGCATGGGCCGGCGCAGGTGCTGTTCTTCTTTACCACCACC TGCCCGTACTGCCAGCGCTCGGCACCGACCGTGCTGCGGGCAGCGCGGGAGCTGCAGGCCAACCTTCCTGGCCGGCCGCA GCTGTTGGGCGTGTGCCATTGCGATACCGCGCAGGCCGCGCGCTACGCACATGTGCACGGTTTCGATTTCCCGGTGGTCA CGTTGACCGATCGTCGCGCGTTGATGCTGTTCCGCGCACGCAACGTGCCGCTGCTGATGGCCATCGATGGGGAGGGGCGC GTGCGTCATTCGCATCTTGGCGTTTTCGATACCACGGAGCGGGTGCAGGACCTCGTTGCCGCCTTGCGCCGCACGGACGC GCCAGCGGCTTTTGCAACGGTGAAGGAGTAA
Upstream 100 bases:
>100_bases ACAACCGCATCCCGTGCGACATCGCAGTTGTCGATATCACCATTGACCATGAGCTGATGCCTGGGCAAGGCTCGAGCACC ACGGACGCTTTGGAGCTGGC
Downstream 100 bases:
>100_bases TGCATGAAGAAGCGTTGGGTAAGCTTGCGTAGTGCGTTGATGGCAGCGACCTTTCTGGCCAGCACCGGCTTCGGTGCCTT CCAGGTGATGGCGGTCGATA
Product: cytochrome C biogenesis protein
Products: NA
Alternate protein names: Redoxin; Secreted Protein
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MARRFPWLWMGLLVACALIAMLAWQNRQLRMQQQWLQTRISAPYDGMYVPRIEATDGDGRRHLLGAPHGPAQVLFFFTTT CPYCQRSAPTVLRAARELQANLPGRPQLLGVCHCDTAQAARYAHVHGFDFPVVTLTDRRALMLFRARNVPLLMAIDGEGR VRHSHLGVFDTTERVQDLVAALRRTDAPAAFATVKE
Sequences:
>Translated_196_residues MARRFPWLWMGLLVACALIAMLAWQNRQLRMQQQWLQTRISAPYDGMYVPRIEATDGDGRRHLLGAPHGPAQVLFFFTTT CPYCQRSAPTVLRAARELQANLPGRPQLLGVCHCDTAQAARYAHVHGFDFPVVTLTDRRALMLFRARNVPLLMAIDGEGR VRHSHLGVFDTTERVQDLVAALRRTDAPAAFATVKE >Mature_195_residues ARRFPWLWMGLLVACALIAMLAWQNRQLRMQQQWLQTRISAPYDGMYVPRIEATDGDGRRHLLGAPHGPAQVLFFFTTTC PYCQRSAPTVLRAARELQANLPGRPQLLGVCHCDTAQAARYAHVHGFDFPVVTLTDRRALMLFRARNVPLLMAIDGEGRV RHSHLGVFDTTERVQDLVAALRRTDAPAAFATVKE
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22092; Mature: 21961
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRFPWLWMGLLVACALIAMLAWQNRQLRMQQQWLQTRISAPYDGMYVPRIEATDGDGR CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCC RHLLGAPHGPAQVLFFFTTTCPYCQRSAPTVLRAARELQANLPGRPQLLGVCHCDTAQAA EEECCCCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH RYAHVHGFDFPVVTLTDRRALMLFRARNVPLLMAIDGEGRVRHSHLGVFDTTERVQDLVA HHHEECCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHH ALRRTDAPAAFATVKE HHHHCCCCCCEEECCC >Mature Secondary Structure ARRFPWLWMGLLVACALIAMLAWQNRQLRMQQQWLQTRISAPYDGMYVPRIEATDGDGR CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCC RHLLGAPHGPAQVLFFFTTTCPYCQRSAPTVLRAARELQANLPGRPQLLGVCHCDTAQAA EEECCCCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH RYAHVHGFDFPVVTLTDRRALMLFRARNVPLLMAIDGEGRVRHSHLGVFDTTERVQDLVA HHHEECCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHH ALRRTDAPAAFATVKE HHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA