Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is mlc [C]
Identifier: 21244889
GI number: 21244889
Start: 4905547
End: 4906704
Strand: Direct
Name: mlc [C]
Synonym: XAC4172
Alternate gene names: 21244889
Gene position: 4905547-4906704 (Clockwise)
Preceding gene: 21244886
Following gene: 21244896
Centisome position: 94.78
GC content: 69.52
Gene sequence:
>1158_bases ATGACACCGCTGGCCATGTCGTCATCCGCTGCAGTCGCGTTGCCACCGCAATCGCCTGCCTTCCCCAGTCTGAGCCTCAA CGAGCGCGACATGCTCGACCGCCTGCGTCTGGCCGGCGTGCTCACCCGTGCCGACCTCAGCCGTGGTACCGGGCTGACCG TGCAGACCGCGGTGCGCCTGATCGAAGGTCTGCACGCGCGCGGCATGGTGCAAATGGGCGAGGCGGTGACGCGCCACGGA CGTGGCAAGCCCGGGGTGGCGGTGTCGCTGAATCCGGCGCATGGGCACACGCTGGGTATCTCCATCGCCACCGATGCGCT GACCCTGGCGCTGGTGGATTTTTCCGGCGCCGTGCTCGCCTGCAGCGAGGTCGGGCTGACCGACACCACCTTGTACGGGG TGCTCACCCAACTGCAGGCCGCCGATGCGGCGCTGCTGGCACGTGTGGACACGGCCGGCGCACGCCTGGGCATCGGCGTG GCGCTGGGCGGGTTCTTCACCGGCGAGGATGCCTTCATCCATCCGCCCGAACCGCTGCGCGCCCTGGGCCAGATCGCACT GTGTCCGTGGCTGGCAGAGGCGTTCGGGCAACCGGTCTGGATGGATAACGACGGCAGCGTTGCCGCCGCCGGCGAAGCGA TGCTGGGCGTTGGCCAGCGCCATCGCGACTTTGCCTATCTGTCCGTGGGGTACGGCCTGGGCGGCGGCCTGGTTATCGAC GGCCAGGTGATGCGGGGGGCACGTGGCAACGCCGGCGCGTTCGCCGACATTTTGCCGGCGCGGCAGCTGGAACGGGCCAC CCTGGAATTGCTGCGCGAACTGCTGGCCGAAGACGGCCTGGCGTTTGCCGATGTACGCAGCCTGCTGGCGGCCTACGATC CGGCCTGGCCGGCGATCGAGCGCTGGATTGCCCGCAGCGCACCGGGGATCGCGTTGATCGTCTCGGCCATCACTGCCGTG TGCGACCCCGACGCCATCGTATTCGGCGGTCGCCTGCCGGGCGATCTGGCGCAACGCCTGATCGCCGCAGTGCAGATCGC CTCCCTGCCACGCGGCGAGCAGGCGCGCCTGCCGGTACTGCTCCCGGCCGAAGCACCTACCGATGCCTGCGCGCTTGGCG CGGCCACCTTGCCGTTGAAGGCGCGTTATTTCGGTTGA
Upstream 100 bases:
>100_bases GGGCACGAGGCGGGTACCTGTACCGGACAGGTACCATCAATTCAATCACTTACCGTGAAGCAATCCGATCGGTCGAAGTA GGTAAGCTAGCCCGACCCCT
Downstream 100 bases:
>100_bases GCGAGGCGCTGCCACGCATGGCAGGCGCGGCTAGCGTTCTTGCGGCGAAGACAGATGCGCACTCTGGTGAGCCGAAGCGG TGCTGTCATCTCCTAGTTGC
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTPLAMSSSAAVALPPQSPAFPSLSLNERDMLDRLRLAGVLTRADLSRGTGLTVQTAVRLIEGLHARGMVQMGEAVTRHG RGKPGVAVSLNPAHGHTLGISIATDALTLALVDFSGAVLACSEVGLTDTTLYGVLTQLQAADAALLARVDTAGARLGIGV ALGGFFTGEDAFIHPPEPLRALGQIALCPWLAEAFGQPVWMDNDGSVAAAGEAMLGVGQRHRDFAYLSVGYGLGGGLVID GQVMRGARGNAGAFADILPARQLERATLELLRELLAEDGLAFADVRSLLAAYDPAWPAIERWIARSAPGIALIVSAITAV CDPDAIVFGGRLPGDLAQRLIAAVQIASLPRGEQARLPVLLPAEAPTDACALGAATLPLKARYFG
Sequences:
>Translated_385_residues MTPLAMSSSAAVALPPQSPAFPSLSLNERDMLDRLRLAGVLTRADLSRGTGLTVQTAVRLIEGLHARGMVQMGEAVTRHG RGKPGVAVSLNPAHGHTLGISIATDALTLALVDFSGAVLACSEVGLTDTTLYGVLTQLQAADAALLARVDTAGARLGIGV ALGGFFTGEDAFIHPPEPLRALGQIALCPWLAEAFGQPVWMDNDGSVAAAGEAMLGVGQRHRDFAYLSVGYGLGGGLVID GQVMRGARGNAGAFADILPARQLERATLELLRELLAEDGLAFADVRSLLAAYDPAWPAIERWIARSAPGIALIVSAITAV CDPDAIVFGGRLPGDLAQRLIAAVQIASLPRGEQARLPVLLPAEAPTDACALGAATLPLKARYFG >Mature_384_residues TPLAMSSSAAVALPPQSPAFPSLSLNERDMLDRLRLAGVLTRADLSRGTGLTVQTAVRLIEGLHARGMVQMGEAVTRHGR GKPGVAVSLNPAHGHTLGISIATDALTLALVDFSGAVLACSEVGLTDTTLYGVLTQLQAADAALLARVDTAGARLGIGVA LGGFFTGEDAFIHPPEPLRALGQIALCPWLAEAFGQPVWMDNDGSVAAAGEAMLGVGQRHRDFAYLSVGYGLGGGLVIDG QVMRGARGNAGAFADILPARQLERATLELLRELLAEDGLAFADVRSLLAAYDPAWPAIERWIARSAPGIALIVSAITAVC DPDAIVFGGRLPGDLAQRLIAAVQIASLPRGEQARLPVLLPAEAPTDACALGAATLPLKARYFG
Specific function: May Be A Regulator In Specific Sugar Metabolism. May Influence The Rate Of Glucose Uptake Or Glycolysis In Cells In The Rich Medium. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: NA
Molecular weight: Translated: 39823; Mature: 39692
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLAMSSSAAVALPPQSPAFPSLSLNERDMLDRLRLAGVLTRADLSRGTGLTVQTAVRL CCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH IEGLHARGMVQMGEAVTRHGRGKPGVAVSLNPAHGHTLGISIATDALTLALVDFSGAVLA HHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEHHHHEEEEEEECCCCEEE CSEVGLTDTTLYGVLTQLQAADAALLARVDTAGARLGIGVALGGFFTGEDAFIHPPEPLR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEECCCCCEECCCHHHH ALGQIALCPWLAEAFGQPVWMDNDGSVAAAGEAMLGVGQRHRDFAYLSVGYGLGGGLVID HHHHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHCCCCCCCEEEEEECCCCCCCEEEE GQVMRGARGNAGAFADILPARQLERATLELLRELLAEDGLAFADVRSLLAAYDPAWPAIE CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH RWIARSAPGIALIVSAITAVCDPDAIVFGGRLPGDLAQRLIAAVQIASLPRGEQARLPVL HHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE LPAEAPTDACALGAATLPLKARYFG ECCCCCCCHHHHCCCCCCEEEECCC >Mature Secondary Structure TPLAMSSSAAVALPPQSPAFPSLSLNERDMLDRLRLAGVLTRADLSRGTGLTVQTAVRL CCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH IEGLHARGMVQMGEAVTRHGRGKPGVAVSLNPAHGHTLGISIATDALTLALVDFSGAVLA HHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEHHHHEEEEEEECCCCEEE CSEVGLTDTTLYGVLTQLQAADAALLARVDTAGARLGIGVALGGFFTGEDAFIHPPEPLR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEECCCCCEECCCHHHH ALGQIALCPWLAEAFGQPVWMDNDGSVAAAGEAMLGVGQRHRDFAYLSVGYGLGGGLVID HHHHHHHHHHHHHHCCCCEEECCCCCEEECCHHHHHCCCCCCCEEEEEECCCCCCCEEEE GQVMRGARGNAGAFADILPARQLERATLELLRELLAEDGLAFADVRSLLAAYDPAWPAIE CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH RWIARSAPGIALIVSAITAVCDPDAIVFGGRLPGDLAQRLIAAVQIASLPRGEQARLPVL HHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE LPAEAPTDACALGAATLPLKARYFG ECCCCCCCHHHHCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]