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The map label for this gene is phoD [H]

Identifier: 21244884

GI number: 21244884

Start: 4901334

End: 4902905

Strand: Direct

Name: phoD [H]

Synonym: XAC4167

Alternate gene names: 21244884

Gene position: 4901334-4902905 (Clockwise)

Preceding gene: 21244883

Following gene: 21244886

Centisome position: 94.7

GC content: 66.67

Gene sequence:

>1572_bases
ATGACCGCCTCCGATCCCGCCCGTCGCCGCGTCCTGCAAGGCTTGGGTGCCGGTGTGTTGCTGCCGGCCACTGCCGGTTG
GCCCACGCGCAGCCTGGCCGCGCCGTCAGGACGACCCACCATCACCGACGGCGTGCAGAGCGGCGATGTGCTGGACGACC
GCGCGATGCTGTGGAGCCGTGCCGATCGCCCGGCGCGGTTGCGGGTGGAATGGGACACGCGTCCAAGCCTGCGTCAGGCG
CGGCGCGTGGACGGCACGATCGCGTCGGCGGCGCACGACTTCACCGCACGTGCGGACCTGAGCGGCCTGCCGCGCGACCA
GGACATCTTCTATCGCGTGCGCTTCGAAGATGCCGACAGCGGCGTGTTGAGCGCGCCCGTCCACGGCCATCTGCGCAGTG
CACCGCAGGCGCGCGACGATGTGCGCTTTGTCTGGAGCGGCGACACGGTCGGCCAGGGCTTCGGCATCAACCCGGACATC
GGCGGCATGCGTATCTACAGCGCGATGCGCGAGCGCAATCCGGATTTCTTCCTGCACAGCGGCGATACCATCTACGCCGA
CAGCCCGATCCCCGCCGAGCTGACGGTGGAAGACGGCAAGCGCTGGCGCAATCTCACCACGGCGGCCAAAAGCAAGGTGG
CCGAAACGCTGGACGAATTTCGCGGCAACTATCGTTACAACCTGCTCGATGAGCACGTGCGCCGCTTCAACGCAGAGGTG
TCGCAGCTCTGGCAATGGGACGACCATGAAACCACCAACAATTGGTCGCCCGGCAAGCAACTGGATGCGCGCTACCAGGT
GCGCGACATCGACGTGCTGGCCAGGCGCGCCCGCCAGGCCTTCCTGGAATATGCGCCGATGCGCGGCATGCGCGCCGATG
GCAACGGGCGCATCTACCGCAAGATTGCCTATGGCCCCTTGCTGGATGTGTTCGTGCTGGACATGCGTAGTGACCGCGGC
GCCAACAGCGACAACCTGCAACCGCAGCCCGGCCCCGATGCCGCGTTTCTCGGGCCGGAGCAATTGGCGTGGTTGCAACG
CGAACTGGCCGGCTCGCGTGCGCAATGGAAGGTGATTGCTGCCGACATGCCGATCGGCCTGCAGGTGCCCGATGGCGAAG
ATGCGAACGGGCGCCCGCGCTGGGAAGCGATCGCCAATGGCGACCCCGGCGTGCCGCGTGGCCGCGAACAGGAAATCGCC
ACGCTGTTGCGCTTCATCAGCCGCGCACGCATCCGCAATACGGTGTGGCTCACCGCCGACGTGCATTACTGCGCGGCACA
CTACTACCACCCCGATCGCGCAGCGTTTCAGCAGTTCGAACCGTTCTGGGAATTTGTCGGCGGCCCGCTCAATGCCGGCA
GTTTCGGGCCCAATGCACTGGATGCCACGTTCGGCCCGAGCGTGGTGTTTCAAAAAGCGCCACCTGCGCCCAACACCTCG
CCGCTGGCCGGCTACCAGTTCTTTGGCGAAGTGGACATCGACGGCCGCAGCGGCGTGCTCACTGTGACGCTGCGCGACCT
GGATGGGGTGGCGCAGTTCCGTCAACCGATTCTGCCGCACGGGGTGACGTAG

Upstream 100 bases:

>100_bases
CGGCCCATCGCGTTAACGCGGCCAGGCGTGGTCACGGACACGTAGCGGTAAGACGGCGGCGCTACACCTGCATGCAGCCG
CAGCTGCCTGAAGGACACGC

Downstream 100 bases:

>100_bases
ACGCACACGCAGCGGACCGGTTACGCGCCGGCAACGGATAGAACGCCAGCGCCGCGCGGCATTCCGGTGCCGCCCACCAT
TCGTGCAGCTGCCACTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MTASDPARRRVLQGLGAGVLLPATAGWPTRSLAAPSGRPTITDGVQSGDVLDDRAMLWSRADRPARLRVEWDTRPSLRQA
RRVDGTIASAAHDFTARADLSGLPRDQDIFYRVRFEDADSGVLSAPVHGHLRSAPQARDDVRFVWSGDTVGQGFGINPDI
GGMRIYSAMRERNPDFFLHSGDTIYADSPIPAELTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEV
SQLWQWDDHETTNNWSPGKQLDARYQVRDIDVLARRARQAFLEYAPMRGMRADGNGRIYRKIAYGPLLDVFVLDMRSDRG
ANSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIAADMPIGLQVPDGEDANGRPRWEAIANGDPGVPRGREQEIA
TLLRFISRARIRNTVWLTADVHYCAAHYYHPDRAAFQQFEPFWEFVGGPLNAGSFGPNALDATFGPSVVFQKAPPAPNTS
PLAGYQFFGEVDIDGRSGVLTVTLRDLDGVAQFRQPILPHGVT

Sequences:

>Translated_523_residues
MTASDPARRRVLQGLGAGVLLPATAGWPTRSLAAPSGRPTITDGVQSGDVLDDRAMLWSRADRPARLRVEWDTRPSLRQA
RRVDGTIASAAHDFTARADLSGLPRDQDIFYRVRFEDADSGVLSAPVHGHLRSAPQARDDVRFVWSGDTVGQGFGINPDI
GGMRIYSAMRERNPDFFLHSGDTIYADSPIPAELTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEV
SQLWQWDDHETTNNWSPGKQLDARYQVRDIDVLARRARQAFLEYAPMRGMRADGNGRIYRKIAYGPLLDVFVLDMRSDRG
ANSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIAADMPIGLQVPDGEDANGRPRWEAIANGDPGVPRGREQEIA
TLLRFISRARIRNTVWLTADVHYCAAHYYHPDRAAFQQFEPFWEFVGGPLNAGSFGPNALDATFGPSVVFQKAPPAPNTS
PLAGYQFFGEVDIDGRSGVLTVTLRDLDGVAQFRQPILPHGVT
>Mature_522_residues
TASDPARRRVLQGLGAGVLLPATAGWPTRSLAAPSGRPTITDGVQSGDVLDDRAMLWSRADRPARLRVEWDTRPSLRQAR
RVDGTIASAAHDFTARADLSGLPRDQDIFYRVRFEDADSGVLSAPVHGHLRSAPQARDDVRFVWSGDTVGQGFGINPDIG
GMRIYSAMRERNPDFFLHSGDTIYADSPIPAELTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEVS
QLWQWDDHETTNNWSPGKQLDARYQVRDIDVLARRARQAFLEYAPMRGMRADGNGRIYRKIAYGPLLDVFVLDMRSDRGA
NSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIAADMPIGLQVPDGEDANGRPRWEAIANGDPGVPRGREQEIAT
LLRFISRARIRNTVWLTADVHYCAAHYYHPDRAAFQQFEPFWEFVGGPLNAGSFGPNALDATFGPSVVFQKAPPAPNTSP
LAGYQFFGEVDIDGRSGVLTVTLRDLDGVAQFRQPILPHGVT

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 58125; Mature: 57993

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASDPARRRVLQGLGAGVLLPATAGWPTRSLAAPSGRPTITDGVQSGDVLDDRAMLWSR
CCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
ADRPARLRVEWDTRPSLRQARRVDGTIASAAHDFTARADLSGLPRDQDIFYRVRFEDADS
CCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
GVLSAPVHGHLRSAPQARDDVRFVWSGDTVGQGFGINPDIGGMRIYSAMRERNPDFFLHS
CEEECCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
GDTIYADSPIPAELTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEV
CCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHH
SQLWQWDDHETTNNWSPGKQLDARYQVRDIDVLARRARQAFLEYAPMRGMRADGNGRIYR
HHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
KIAYGPLLDVFVLDMRSDRGANSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIA
EEECCCCEEHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
ADMPIGLQVPDGEDANGRPRWEAIANGDPGVPRGREQEIATLLRFISRARIRNTVWLTAD
ECCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEC
VHYCAAHYYHPDRAAFQQFEPFWEFVGGPLNAGSFGPNALDATFGPSVVFQKAPPAPNTS
HHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
PLAGYQFFGEVDIDGRSGVLTVTLRDLDGVAQFRQPILPHGVT
CCCCEEEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TASDPARRRVLQGLGAGVLLPATAGWPTRSLAAPSGRPTITDGVQSGDVLDDRAMLWSR
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
ADRPARLRVEWDTRPSLRQARRVDGTIASAAHDFTARADLSGLPRDQDIFYRVRFEDADS
CCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
GVLSAPVHGHLRSAPQARDDVRFVWSGDTVGQGFGINPDIGGMRIYSAMRERNPDFFLHS
CEEECCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
GDTIYADSPIPAELTVEDGKRWRNLTTAAKSKVAETLDEFRGNYRYNLLDEHVRRFNAEV
CCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHH
SQLWQWDDHETTNNWSPGKQLDARYQVRDIDVLARRARQAFLEYAPMRGMRADGNGRIYR
HHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
KIAYGPLLDVFVLDMRSDRGANSDNLQPQPGPDAAFLGPEQLAWLQRELAGSRAQWKVIA
EEECCCCEEHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
ADMPIGLQVPDGEDANGRPRWEAIANGDPGVPRGREQEIATLLRFISRARIRNTVWLTAD
ECCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEC
VHYCAAHYYHPDRAAFQQFEPFWEFVGGPLNAGSFGPNALDATFGPSVVFQKAPPAPNTS
HHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
PLAGYQFFGEVDIDGRSGVLTVTLRDLDGVAQFRQPILPHGVT
CCCCEEEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]