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The map label for this gene is phoD [H]

Identifier: 21244883

GI number: 21244883

Start: 4899533

End: 4901161

Strand: Direct

Name: phoD [H]

Synonym: XAC4166

Alternate gene names: 21244883

Gene position: 4899533-4901161 (Clockwise)

Preceding gene: 21244874

Following gene: 21244884

Centisome position: 94.67

GC content: 69.55

Gene sequence:

>1629_bases
ATGCCCGTGATCGACCCGCCTGCCGCCTCACCCCTGCCTGATTGCGCTGCCACGCTTGTGCCACCGGATCCGAGCCGGCG
GCGCATCCTCATCGCCGGCGCCAGCCTGGCTGCGGCGGGGCTGCTGAGCCCGTTCGCACGCGCCAGCGGCAGTGCCGATC
CCTTCACGCTGGGCGTGGCGGCCGGCGACCCGTTGGCCGATGGCTTTGTGATCTGGACGCGGCTGGCACCCCGCCCGCTG
GACCCGGACGGACGCGGCGGCCTGCGCGCGGCGGTGCCGGTGCGCTGGCAGGTGGCCAGCGACCCGCAGATGCGCACCAT
CGTGCGCCAGGGCGAGACCATCGCCAGCCCCGTCTGGGGCCACGCAGTGCACGTGGAGCTCACCGGTTTGATGGCCGATC
GCCCCTACTGGTACTGCTTTCAGGCCCTGGGTGCACGCAGCCCGATCGGCAGCGCGCGCACCCTGCCGGCAGCGCATCAG
ACGCCGGACGCAGCGCGGTTCGGGTTTGTTTCCTGCTCGCACTGGGAACTGGGGTATTTCAGCGCCTACCGCCACCTCGC
CGCCGAGCAGCCGGACCTGGTGTTCTTCCTGGGCGATTACATCTACGAGTACAGCAACCACGGCGAGGCGACGAACAAGA
TCGTGCGCCCGCACGGCAGCGGCGAATGCCTGGATCTGGCCGGCTACCGCAATCGCTATGCGCTGTACCGCACCGACCCG
GACCTGCAGGCGCTGCATGCCGGCAGCGCCTGCGCGGCGACCTGGGACGATCACGAGGTACAGAACGATTACGCCAATCG
CTGGTCGCAGGACCCGTCGATTCCGGTCGATACCTTTCTGGCCCGGCGCGCTGCCGCCTACCGCGCCTTCTACGAACATT
TCCCGCTGCGTGCGCGGCATCGCCCGCACGGCGCGGACATGCGCATCTACCGCTCGTTCGATTACGGCCAGCTGGCGCGT
TTCTACGTGCTCGATGGCCGCCAGTACCGCAGCGAGCAACCCTGCCCGCAGGCCAATGGCTGGCGCGGCGGCCATGTGGT
GGCCGACAGTTGCCGCGAGCGCACCGACCCGCGGCGCACCATGCTCGGCTGGGAACAGGAGCGCTGGCTGCATGGCGGCT
TCGCGCAGTCGCCCGCCCGCTGGAACGTGATTGCGCAGGATCTGCTGGTGGCACCGATGCGACAGGCGGGGCGCGACGGC
GTGGTCGGGCACTGGACCGACGGTTGGGACGGCTACCCGGCCACGCGCGAACGCATGCTCGATGCGATTGCAAAGACGCG
CCTGCGCAACCCGGTGTTCTGGGGCGGCGACATCCACTCGTACTGGGTCACCGACCTGAAGGCCGATCCGGCCGACGACG
CGTCGGCAACGCTGGCCACCGAATTCGTCGGCACTTCGATCACCTCCGACGGCCAGAGCAACGACGAACTGCATGCGACC
ATGGCAGCCAACCCGCACGTGCATTACGTGGACGGGCAAACGCGCGGCTATGTGTCGGTGACGCTCACGCCGGGCCGGAT
GGAAACGCGGCTGCAGGGCATCTCCGATCGGCGCGACCGCAACGCCACGGTGTCGACCACCAAGCGCTTCGTGGTGGAGG
ACGGCAGGCCCGGCGCAGTGGAGGCGTGA

Upstream 100 bases:

>100_bases
TACCTGTGCTGAACCACCCACAGTGACGCTGCAACACGCGACACAAAACGGACATGTCCTGGCCACAGCATGGTCGTGTC
TGCTTGCCTGCCGTTTGTCC

Downstream 100 bases:

>100_bases
TCCATTGCGGCAGCGGCGGACGCACTGCCCCCGAGATGCGGCGCGCGGCATCCCTGATTGCGGCGCACTGTGCGGCCCAT
CGCGTTAACGCGGCCAGGCG

Product: alkaline phosphatase D

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MPVIDPPAASPLPDCAATLVPPDPSRRRILIAGASLAAAGLLSPFARASGSADPFTLGVAAGDPLADGFVIWTRLAPRPL
DPDGRGGLRAAVPVRWQVASDPQMRTIVRQGETIASPVWGHAVHVELTGLMADRPYWYCFQALGARSPIGSARTLPAAHQ
TPDAARFGFVSCSHWELGYFSAYRHLAAEQPDLVFFLGDYIYEYSNHGEATNKIVRPHGSGECLDLAGYRNRYALYRTDP
DLQALHAGSACAATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARHRPHGADMRIYRSFDYGQLAR
FYVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRTMLGWEQERWLHGGFAQSPARWNVIAQDLLVAPMRQAGRDG
VVGHWTDGWDGYPATRERMLDAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNDELHAT
MAANPHVHYVDGQTRGYVSVTLTPGRMETRLQGISDRRDRNATVSTTKRFVVEDGRPGAVEA

Sequences:

>Translated_542_residues
MPVIDPPAASPLPDCAATLVPPDPSRRRILIAGASLAAAGLLSPFARASGSADPFTLGVAAGDPLADGFVIWTRLAPRPL
DPDGRGGLRAAVPVRWQVASDPQMRTIVRQGETIASPVWGHAVHVELTGLMADRPYWYCFQALGARSPIGSARTLPAAHQ
TPDAARFGFVSCSHWELGYFSAYRHLAAEQPDLVFFLGDYIYEYSNHGEATNKIVRPHGSGECLDLAGYRNRYALYRTDP
DLQALHAGSACAATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARHRPHGADMRIYRSFDYGQLAR
FYVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRTMLGWEQERWLHGGFAQSPARWNVIAQDLLVAPMRQAGRDG
VVGHWTDGWDGYPATRERMLDAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNDELHAT
MAANPHVHYVDGQTRGYVSVTLTPGRMETRLQGISDRRDRNATVSTTKRFVVEDGRPGAVEA
>Mature_541_residues
PVIDPPAASPLPDCAATLVPPDPSRRRILIAGASLAAAGLLSPFARASGSADPFTLGVAAGDPLADGFVIWTRLAPRPLD
PDGRGGLRAAVPVRWQVASDPQMRTIVRQGETIASPVWGHAVHVELTGLMADRPYWYCFQALGARSPIGSARTLPAAHQT
PDAARFGFVSCSHWELGYFSAYRHLAAEQPDLVFFLGDYIYEYSNHGEATNKIVRPHGSGECLDLAGYRNRYALYRTDPD
LQALHAGSACAATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARHRPHGADMRIYRSFDYGQLARF
YVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRTMLGWEQERWLHGGFAQSPARWNVIAQDLLVAPMRQAGRDGV
VGHWTDGWDGYPATRERMLDAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNDELHATM
AANPHVHYVDGQTRGYVSVTLTPGRMETRLQGISDRRDRNATVSTTKRFVVEDGRPGAVEA

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 59918; Mature: 59787

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVIDPPAASPLPDCAATLVPPDPSRRRILIAGASLAAAGLLSPFARASGSADPFTLGVA
CCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEE
AGDPLADGFVIWTRLAPRPLDPDGRGGLRAAVPVRWQVASDPQMRTIVRQGETIASPVWG
CCCCCCCCEEEEEECCCCCCCCCCCCCCEEECEEEEEECCCCHHHHHHHCCCHHCCCCCC
HAVHVELTGLMADRPYWYCFQALGARSPIGSARTLPAAHQTPDAARFGFVSCSHWELGYF
CEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCEEECCCCCHHH
SAYRHLAAEQPDLVFFLGDYIYEYSNHGEATNKIVRPHGSGECLDLAGYRNRYALYRTDP
HHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHCCEECCCCCCCEEEECCCCCCEEEEECCC
DLQALHAGSACAATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARH
CHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
RPHGADMRIYRSFDYGQLARFYVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRT
CCCCCCEEEEECCCHHHEEEEEEECCHHHCCCCCCCCCCCCCCCCEEHHHHHHCCCCHHH
MLGWEQERWLHGGFAQSPARWNVIAQDLLVAPMRQAGRDGVVGHWTDGWDGYPATRERML
HCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHH
DAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNDELHAT
HHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE
MAANPHVHYVDGQTRGYVSVTLTPGRMETRLQGISDRRDRNATVSTTKRFVVEDGRPGAV
EECCCEEEEECCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCCC
EA
CC
>Mature Secondary Structure 
PVIDPPAASPLPDCAATLVPPDPSRRRILIAGASLAAAGLLSPFARASGSADPFTLGVA
CCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEE
AGDPLADGFVIWTRLAPRPLDPDGRGGLRAAVPVRWQVASDPQMRTIVRQGETIASPVWG
CCCCCCCCEEEEEECCCCCCCCCCCCCCEEECEEEEEECCCCHHHHHHHCCCHHCCCCCC
HAVHVELTGLMADRPYWYCFQALGARSPIGSARTLPAAHQTPDAARFGFVSCSHWELGYF
CEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCEEECCCCCHHH
SAYRHLAAEQPDLVFFLGDYIYEYSNHGEATNKIVRPHGSGECLDLAGYRNRYALYRTDP
HHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHCCEECCCCCCCEEEECCCCCCEEEEECCC
DLQALHAGSACAATWDDHEVQNDYANRWSQDPSIPVDTFLARRAAAYRAFYEHFPLRARH
CHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
RPHGADMRIYRSFDYGQLARFYVLDGRQYRSEQPCPQANGWRGGHVVADSCRERTDPRRT
CCCCCCEEEEECCCHHHEEEEEEECCHHHCCCCCCCCCCCCCCCCEEHHHHHHCCCCHHH
MLGWEQERWLHGGFAQSPARWNVIAQDLLVAPMRQAGRDGVVGHWTDGWDGYPATRERML
HCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHH
DAIAKTRLRNPVFWGGDIHSYWVTDLKADPADDASATLATEFVGTSITSDGQSNDELHAT
HHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEE
MAANPHVHYVDGQTRGYVSVTLTPGRMETRLQGISDRRDRNATVSTTKRFVVEDGRPGAV
EECCCEEEEECCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCCC
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]