Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244855
Identifier: 21244855
GI number: 21244855
Start: 4864112
End: 4864522
Strand: Direct
Name: 21244855
Synonym: XAC4138
Alternate gene names: NA
Gene position: 4864112-4864522 (Clockwise)
Preceding gene: 21244854
Following gene: 21244865
Centisome position: 93.98
GC content: 55.96
Gene sequence:
>411_bases GTGGGGATACCTAAGAACCTGATACTGTTACCCCGCATCGCTACGGCCGCCTTCGAGGGTAGCCTGACCCGCAAGCGCGA GCGCATCGAGACACTATTGCTGCCGCACGCACTGGCGATGTTCGCCTCATGGTTGGCAGGCATGGCCGCCGAAGCGATCG ACGCGCAGCACAATCTCAACCCTTACCGGACCTCGCGCAGACTGTACTGCCTGATGCGGCTAGGCCAGGAAGCTTCATGT CGCGGATGGCTAGAACACCTGTCCACGCATGCTGGACGCACTACGCCACTTCTCGCCGGAAGCCAGTCAGAACCTGCGAT TTTTAGCTTGAAAAAGTGTGCAAACCTCAGACCCTGCCCCTTTTTACTGGAAAATTTATTCTTTTTCCGAAAATTTGGAG TGGTCGAATAG
Upstream 100 bases:
>100_bases GCCAGGCGCTGGCCGATGGAACCTGTCTCACGCTGGCTAGAACGCTTACGTACACTGCCCGAAGCAGTGCGTGAGCAGAT GACGCTGGTGCTTTAAAAAC
Downstream 100 bases:
>100_bases TCTAACTAGATAGATACCTTAATGCCGCCCTTGAAACTTACAAATCCAGGCTTCGGTATCATCGCAGCATCAAATGACGA GCCTGTAGCTGCCTTTTCAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MGIPKNLILLPRIATAAFEGSLTRKRERIETLLLPHALAMFASWLAGMAAEAIDAQHNLNPYRTSRRLYCLMRLGQEASC RGWLEHLSTHAGRTTPLLAGSQSEPAIFSLKKCANLRPCPFLLENLFFFRKFGVVE
Sequences:
>Translated_136_residues MGIPKNLILLPRIATAAFEGSLTRKRERIETLLLPHALAMFASWLAGMAAEAIDAQHNLNPYRTSRRLYCLMRLGQEASC RGWLEHLSTHAGRTTPLLAGSQSEPAIFSLKKCANLRPCPFLLENLFFFRKFGVVE >Mature_135_residues GIPKNLILLPRIATAAFEGSLTRKRERIETLLLPHALAMFASWLAGMAAEAIDAQHNLNPYRTSRRLYCLMRLGQEASCR GWLEHLSTHAGRTTPLLAGSQSEPAIFSLKKCANLRPCPFLLENLFFFRKFGVVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15269; Mature: 15138
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPKNLILLPRIATAAFEGSLTRKRERIETLLLPHALAMFASWLAGMAAEAIDAQHNLN CCCCCCEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYRTSRRLYCLMRLGQEASCRGWLEHLSTHAGRTTPLLAGSQSEPAIFSLKKCANLRPCP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCCCCH FLLENLFFFRKFGVVE HHHHHHHHHHHHCCCC >Mature Secondary Structure GIPKNLILLPRIATAAFEGSLTRKRERIETLLLPHALAMFASWLAGMAAEAIDAQHNLN CCCCCEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYRTSRRLYCLMRLGQEASCRGWLEHLSTHAGRTTPLLAGSQSEPAIFSLKKCANLRPCP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHCCCCCCH FLLENLFFFRKFGVVE HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA