Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244854
Identifier: 21244854
GI number: 21244854
Start: 4862893
End: 4864107
Strand: Direct
Name: 21244854
Synonym: XAC4137
Alternate gene names: NA
Gene position: 4862893-4864107 (Clockwise)
Preceding gene: 21244851
Following gene: 21244855
Centisome position: 93.96
GC content: 61.98
Gene sequence:
>1215_bases ATGCGCGCCAGCGAAGTATTGCAGAAGTGCCTGTCTAACTCACTCTCCGGGATGCATGCGTTACGCCAACGTACCTTGCT GGGCGCGGTTGAAGCGCTAGTGCACGGGGGCCGACTGACGCTGATCGACATCGCACGCGCGTGGCCTGGCGCGACGCGGG TACGTGCGCCCCTCAAGGCATGCGACCGCCTGCTGTGCAATCGCACGTTGCAGGCCGAGCGATCCATGATCGAGCGGGAC ATGGCGCATTGGCTGTTGCGCGGCGACCAGCCGGTGATCGTCATCGACTGGAGCGATTTGAAGCCGGACAAGTCATGGTG TCTGCTGCGCGCAGCCGTGCCGATCGGTGGACGCACACTCACCTTGCTGGACATGGTGGTTGCCGGGAAACAGCAGGGAT CGCCCGGCGCGGAAAAACGCTTCTTGCAACAGCTCAGGCGAATGATTCCAGACGATGTGCGTCCGATCCTGGTCACGGAC GCCGGATTCCGCACGCCATGGTTTCGCGCGGTGTCGGCGATGGGCTGGGATTGGGTCGGGCGTCTTCGCGGACGCACGCA GGTCAAACCGCAAGACGTGCCCGATGATGCAGCGCAATGGATCGATAGCCGACGCCTGCATGCATTGGCGTCCAACCGTG CATGCGAATTGCCACCGATGCAGGCCAATCGCAGTGATCCACTCGATTGCCGTCTGGTGCTCTATGCCAAGACACGTCTG GGACGTCAGCAACGCAACCGCCGCTCGCCAGCGAAGGTCTCGCGTGCATCCTCCAGCTTGAAAGCAGCGGCGCGTGAACG CGAGCCGTGGTTGATCGTTGCCTCCCCACAGTTACAAGCACCCAGCGCGAAACACTTGGTCAATCTGTACGCACGAAGGA TGCAGATCGAGCTGGCATTTCGTGATCTGAAGTCGCATCGCTACGGTCAGGCGATGGAAGACAGCCTGACCCGTCGCGGC GAGCGGTTGCAGATCCTGTTGTTGCTCAACACACTGGCCACCTTTGCCAGTTGGCTGGCAGGACTGGGATGCGAAGCCAC CGGTATCGCCCAGTGGCTATCGCCACGCAGCAGTACACGCAAGCTCTACTCGACACTGCGTGTCGGCCGCCAGGCGCTGG CCAGGCGCTGGCCGATGGAACCTGTCTCACGCTGGCTAGAACGCTTACGTACACTGCCCGAAGCAGTGCGTGAGCAGATG ACGCTGGTGCTTTAA
Upstream 100 bases:
>100_bases TTCTTCCTGCGAGATCAAGCGCTTGGTGGGCCAGGCGGTGGAAGAAGGTGCGCGCATGGGGCACGCTTCAAGGTGATTAA GCCAGAGAAGAGTGCCGACC
Downstream 100 bases:
>100_bases AAACGTGGGGATACCTAAGAACCTGATACTGTTACCCCGCATCGCTACGGCCGCCTTCGAGGGTAGCCTGACCCGCAAGC GCGAGCGCATCGAGACACTA
Product: ISxac1 transposase
Products: NA
Alternate protein names: ISxac1 Transposase; Transposase; Transposase For IS; IS10 Orf; ISCro2 Transposase; Transposase IS; ISXoo8 Transposase; IS4 Family Transposase; ISSfl3 ORF
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MRASEVLQKCLSNSLSGMHALRQRTLLGAVEALVHGGRLTLIDIARAWPGATRVRAPLKACDRLLCNRTLQAERSMIERD MAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPIGGRTLTLLDMVVAGKQQGSPGAEKRFLQQLRRMIPDDVRPILVTD AGFRTPWFRAVSAMGWDWVGRLRGRTQVKPQDVPDDAAQWIDSRRLHALASNRACELPPMQANRSDPLDCRLVLYAKTRL GRQQRNRRSPAKVSRASSSLKAAAREREPWLIVASPQLQAPSAKHLVNLYARRMQIELAFRDLKSHRYGQAMEDSLTRRG ERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGRQALARRWPMEPVSRWLERLRTLPEAVREQM TLVL
Sequences:
>Translated_404_residues MRASEVLQKCLSNSLSGMHALRQRTLLGAVEALVHGGRLTLIDIARAWPGATRVRAPLKACDRLLCNRTLQAERSMIERD MAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPIGGRTLTLLDMVVAGKQQGSPGAEKRFLQQLRRMIPDDVRPILVTD AGFRTPWFRAVSAMGWDWVGRLRGRTQVKPQDVPDDAAQWIDSRRLHALASNRACELPPMQANRSDPLDCRLVLYAKTRL GRQQRNRRSPAKVSRASSSLKAAAREREPWLIVASPQLQAPSAKHLVNLYARRMQIELAFRDLKSHRYGQAMEDSLTRRG ERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGRQALARRWPMEPVSRWLERLRTLPEAVREQM TLVL >Mature_404_residues MRASEVLQKCLSNSLSGMHALRQRTLLGAVEALVHGGRLTLIDIARAWPGATRVRAPLKACDRLLCNRTLQAERSMIERD MAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPIGGRTLTLLDMVVAGKQQGSPGAEKRFLQQLRRMIPDDVRPILVTD AGFRTPWFRAVSAMGWDWVGRLRGRTQVKPQDVPDDAAQWIDSRRLHALASNRACELPPMQANRSDPLDCRLVLYAKTRL GRQQRNRRSPAKVSRASSSLKAAAREREPWLIVASPQLQAPSAKHLVNLYARRMQIELAFRDLKSHRYGQAMEDSLTRRG ERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGRQALARRWPMEPVSRWLERLRTLPEAVREQM TLVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45768; Mature: 45768
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASEVLQKCLSNSLSGMHALRQRTLLGAVEALVHGGRLTLIDIARAWPGATRVRAPLKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHH CDRLLCNRTLQAERSMIERDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPIGGRTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHEEEEEECCCCCCHH TLLDMVVAGKQQGSPGAEKRFLQQLRRMIPDDVRPILVTDAGFRTPWFRAVSAMGWDWVG HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCHHHHH RLRGRTQVKPQDVPDDAAQWIDSRRLHALASNRACELPPMQANRSDPLDCRLVLYAKTRL HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHH GRQQRNRRSPAKVSRASSSLKAAAREREPWLIVASPQLQAPSAKHLVNLYARRMQIELAF HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH RDLKSHRYGQAMEDSLTRRGERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTR HHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH KLYSTLRVGRQALARRWPMEPVSRWLERLRTLPEAVREQMTLVL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRASEVLQKCLSNSLSGMHALRQRTLLGAVEALVHGGRLTLIDIARAWPGATRVRAPLKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHH CDRLLCNRTLQAERSMIERDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPIGGRTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHEEEEEECCCCCCHH TLLDMVVAGKQQGSPGAEKRFLQQLRRMIPDDVRPILVTDAGFRTPWFRAVSAMGWDWVG HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCHHHHH RLRGRTQVKPQDVPDDAAQWIDSRRLHALASNRACELPPMQANRSDPLDCRLVLYAKTRL HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHH GRQQRNRRSPAKVSRASSSLKAAAREREPWLIVASPQLQAPSAKHLVNLYARRMQIELAF HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH RDLKSHRYGQAMEDSLTRRGERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTR HHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH KLYSTLRVGRQALARRWPMEPVSRWLERLRTLPEAVREQMTLVL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA