Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244819
Identifier: 21244819
GI number: 21244819
Start: 4804173
End: 4805522
Strand: Direct
Name: 21244819
Synonym: XAC4102
Alternate gene names: NA
Gene position: 4804173-4805522 (Clockwise)
Preceding gene: 21244808
Following gene: 77748756
Centisome position: 92.82
GC content: 66.37
Gene sequence:
>1350_bases ATGCCGGCAGCCGGGCCGGCTCCCGGACCGGAGTGTCCGGATGTCCTGATCGTCGGCGGCGGCCCGGCTGGCTGCACCGC GGCCATCGCACTTGCCGAGCTCGGTTGGTCCGTGACCCTGCTCGAGAAGGCACAGCACCCGCGCTTTCATATCGGCGAAT CCTTGCTGCCGATGAACATGCCGATTCTTGAACGCCTCGGCGTGCTGGAAGACGTGCGCGCCATCGGCGTGCTGAAGCGT GGGGCGGATTTTCCCAACGACAGCGGCGGCTACAACACATTCCGTTTTTCGCACGCGCTCGATGCCAAGGCCGATTTCGC CTTCCAGGTGCCGCGTGCGCAATTCGACCATGTGCTGTTCCAGCGTGCGCGTGCGGTGGGCGTGGATGCACGCGAGCAGG TCTGCGTGGAGCAGGTCGCCTTCGACGGCGAACACCCGGTGCTGCAGGCACGCACGGCAGATGGTGGCGTACAGCAGTTC CGCCCGCGCTATCTGCTCGATGCCAGCGGCCGCGACACCTTCCTGGGCAACCGCCTCAAGCTCAAACGCGCCAATGCAAC GCATCAATCGGCCGCCTTGTTCAGCCATTTCCGCGGCGTGGCACGACGCCCGGGCGAGGATGCCGGCAACATCAGCATCT ACCGGCATGCGCATGGCTGGATGTGGCTGATTCCGCTGCCGGAGGACATCATGAGCGTGGGTGCGGTCTGCTACCCGGAC TACATGAAGACCCGCCAGGGCGACAGCGAGGGCTTCTTGATGCGCACGCTGGCGCTCAACGCCGAGCTCAGCGCGCGCAT GCTCGGCGCCGAGCGCGTGGCGCCGGTGCATGCCACCGGTAACTACGCCTACGAATGCACGCGCATGGCCGGGCCGCGCT GGTTGATGCTGGGCGATGCCTACACCTTCGTCGACCCGATGTTTTCCTCTGGCGTGTTCCTGGCCATGCACGGCGCCGAA CGTGGCGCGGCGATGGTGGATGCCGCACTGCGCGCACCGCAGTCGGAGGCGAAACTGCAGCGCGCCCTGCAGCGCGAACT TGCGCGCGGCGTGGATGAATTCAAGTGGTTCATCTACCGCTTCACCTCGCCCACCATGCGCGCCTTGTTCGCGCAGCCGC AAAACACCTGGCAGTTGGAGCAGGCGGTGGTGGCGATGCTGGCCGGCGATGTGTTCGACGCCCCCAAAGTCCGCATCCGC CTGCGCGCCTTTCGCGCACTGTACGCACTCACCGCCTTGTCGATGATGCCGCGCGCCTGGCAGTCGTGGCGCCATCGCCG GCGTCAGGCCAAGCTCGGCTTCGACGGCGACACCTTGCAACGCGACACGCAACAACGAGACGCTCCATGA
Upstream 100 bases:
>100_bases GGCCGGGCCGCCGGTCAGGCTATCATGACTGCATGACGCTCGCCCGCCGCAGGTTCGTTCCAGGATGACTTCCACCGCTG TTCGCCTCACCCCGACCGCC
Downstream 100 bases:
>100_bases CCGCTTCCCAGGCCCAGACCACGCACGCCGTGCGCCACCCCCGGCTGCAGGTCGACTATGTCGACCAGACCGACCCTGCC GTGCTGCTGACCGACCCGCA
Product: hydroxylase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Halogenase; Oxidoreductase; Dehydrogenase; Geranylgeranyl Reductase; Oxidoreductase Protein; Monooxygenase; FADH2 Dependent Halogenase; Pyridine Nucleotide-Disulfide Oxidoreductase; Alkylhalidase PltA; Dehyrogenase; Oxidoreductase Transmembrane Protein; Halogenase B; LOW QUALITY PROTEIN Dehydrogenase; Alkylhalidase-Like Protein; Dehydrogenases; Halogenase Protein; Geranylgeranyl Hydrogenase BchP; Flavoprotein/Dehydrogenase; Dehydrogenase/Oxidoreductase; Electron Transfer Flavoprotein; FAD Oxidoreductase; Hydroxylase; Alkylhalidase CmlS; Alkylhalidase
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MPAAGPAPGPECPDVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNMPILERLGVLEDVRAIGVLKR GADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLFQRARAVGVDAREQVCVEQVAFDGEHPVLQARTADGGVQQF RPRYLLDASGRDTFLGNRLKLKRANATHQSAALFSHFRGVARRPGEDAGNISIYRHAHGWMWLIPLPEDIMSVGAVCYPD YMKTRQGDSEGFLMRTLALNAELSARMLGAERVAPVHATGNYAYECTRMAGPRWLMLGDAYTFVDPMFSSGVFLAMHGAE RGAAMVDAALRAPQSEAKLQRALQRELARGVDEFKWFIYRFTSPTMRALFAQPQNTWQLEQAVVAMLAGDVFDAPKVRIR LRAFRALYALTALSMMPRAWQSWRHRRRQAKLGFDGDTLQRDTQQRDAP
Sequences:
>Translated_449_residues MPAAGPAPGPECPDVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNMPILERLGVLEDVRAIGVLKR GADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLFQRARAVGVDAREQVCVEQVAFDGEHPVLQARTADGGVQQF RPRYLLDASGRDTFLGNRLKLKRANATHQSAALFSHFRGVARRPGEDAGNISIYRHAHGWMWLIPLPEDIMSVGAVCYPD YMKTRQGDSEGFLMRTLALNAELSARMLGAERVAPVHATGNYAYECTRMAGPRWLMLGDAYTFVDPMFSSGVFLAMHGAE RGAAMVDAALRAPQSEAKLQRALQRELARGVDEFKWFIYRFTSPTMRALFAQPQNTWQLEQAVVAMLAGDVFDAPKVRIR LRAFRALYALTALSMMPRAWQSWRHRRRQAKLGFDGDTLQRDTQQRDAP >Mature_448_residues PAAGPAPGPECPDVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNMPILERLGVLEDVRAIGVLKRG ADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLFQRARAVGVDAREQVCVEQVAFDGEHPVLQARTADGGVQQFR PRYLLDASGRDTFLGNRLKLKRANATHQSAALFSHFRGVARRPGEDAGNISIYRHAHGWMWLIPLPEDIMSVGAVCYPDY MKTRQGDSEGFLMRTLALNAELSARMLGAERVAPVHATGNYAYECTRMAGPRWLMLGDAYTFVDPMFSSGVFLAMHGAER GAAMVDAALRAPQSEAKLQRALQRELARGVDEFKWFIYRFTSPTMRALFAQPQNTWQLEQAVVAMLAGDVFDAPKVRIRL RAFRALYALTALSMMPRAWQSWRHRRRQAKLGFDGDTLQRDTQQRDAP
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49810; Mature: 49678
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAGPAPGPECPDVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNM CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEHHCCCCCEECCCCCCCCCC PILERLGVLEDVRAIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLF HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHH QRARAVGVDAREQVCVEQVAFDGEHPVLQARTADGGVQQFRPRYLLDASGRDTFLGNRLK HHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCEEEECCCCCCCCCCCEE LKRANATHQSAALFSHFRGVARRPGEDAGNISIYRHAHGWMWLIPLPEDIMSVGAVCYPD EEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCHHHHHCCCCCCCH YMKTRQGDSEGFLMRTLALNAELSARMLGAERVAPVHATGNYAYECTRMAGPRWLMLGDA HHHHCCCCCCCEEEEEEECCCHHHHHHHCHHHCCEEEECCCCEEEEEECCCCEEEEECCC YTFVDPMFSSGVFLAMHGAERGAAMVDAALRAPQSEAKLQRALQRELARGVDEFKWFIYR HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHEEEHEE FTSPTMRALFAQPQNTWQLEQAVVAMLAGDVFDAPKVRIRLRAFRALYALTALSMMPRAW ECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QSWRHRRRQAKLGFDGDTLQRDTQQRDAP HHHHHHHHHCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure PAAGPAPGPECPDVLIVGGGPAGCTAAIALAELGWSVTLLEKAQHPRFHIGESLLPMNM CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEHHCCCCCEECCCCCCCCCC PILERLGVLEDVRAIGVLKRGADFPNDSGGYNTFRFSHALDAKADFAFQVPRAQFDHVLF HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHH QRARAVGVDAREQVCVEQVAFDGEHPVLQARTADGGVQQFRPRYLLDASGRDTFLGNRLK HHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCEEEECCCCCCCCCCCEE LKRANATHQSAALFSHFRGVARRPGEDAGNISIYRHAHGWMWLIPLPEDIMSVGAVCYPD EEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCHHHHHCCCCCCCH YMKTRQGDSEGFLMRTLALNAELSARMLGAERVAPVHATGNYAYECTRMAGPRWLMLGDA HHHHCCCCCCCEEEEEEECCCHHHHHHHCHHHCCEEEECCCCEEEEEECCCCEEEEECCC YTFVDPMFSSGVFLAMHGAERGAAMVDAALRAPQSEAKLQRALQRELARGVDEFKWFIYR HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHEEEHEE FTSPTMRALFAQPQNTWQLEQAVVAMLAGDVFDAPKVRIRLRAFRALYALTALSMMPRAW ECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QSWRHRRRQAKLGFDGDTLQRDTQQRDAP HHHHHHHHHCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA