Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244808
Identifier: 21244808
GI number: 21244808
Start: 4796325
End: 4796873
Strand: Direct
Name: 21244808
Synonym: XAC4091
Alternate gene names: NA
Gene position: 4796325-4796873 (Clockwise)
Preceding gene: 21244806
Following gene: 21244819
Centisome position: 92.67
GC content: 58.11
Gene sequence:
>549_bases ATGAGTGCAGCGAACTTGGCGGGCCTTGGCAAGCAAGGCGAGGACGCGATGAATGCATGGCTGCAGCTGCATGGCTTCAG CTATGTGGCCATTTGCCAAGCGCCGGACACCTTCGCGCCATTATTCGGCACAGCGGTCAAACGCCCGGATTTCCTGATGC TGTTGGAGTCGATCGGCTTGATCGCCATTGACGTCAAGAACTACGTCCAGTTCAAGCATGCCAACCAGGCCTGTTACAGC CTTCCGTACGAGAGCGAGCTCAAACGTGCGGTGGCGTTCGAACGGCTATTCCGCATTCCGGTCTGGTACGCCTACTTCAA TCGTCAGGATGCCGGTCGGTCCTTCCATTGGATCAGCGCATTGAAGGCACTTGAAGTAGGCGAGATCAAGCCGGCGCGCG ATGACAATCCGGAATTTCTCTCTATCGGGTTGGAGCATTTCGAACACGTACATAGCGGCGGCGATATCGCACGGCTGTAT ACGCACCGCCTGCCCAGCGTCGCCAACCTGAGCGCGCTGGTTGCAAGCAAGACACCCGCCGCCTCCTGA
Upstream 100 bases:
>100_bases CGTATTTGCCTGACCATGCCGCAAATCCGACCGCTGCCGCTTGAGCGCTTTCGAATCCGACTGGTAGCTTTCGAACACGG GCAGCGATGAACGACACGAG
Downstream 100 bases:
>100_bases AGCTGATCTCAGGGCGCGCCCAGCATCACGGTGGCGCGTCCTTCGGCAAGCAATTGCGCGCCATGGGTCAGGCGAAAACT GTATTGCTGGCTGTCCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSAANLAGLGKQGEDAMNAWLQLHGFSYVAICQAPDTFAPLFGTAVKRPDFLMLLESIGLIAIDVKNYVQFKHANQACYS LPYESELKRAVAFERLFRIPVWYAYFNRQDAGRSFHWISALKALEVGEIKPARDDNPEFLSIGLEHFEHVHSGGDIARLY THRLPSVANLSALVASKTPAAS
Sequences:
>Translated_182_residues MSAANLAGLGKQGEDAMNAWLQLHGFSYVAICQAPDTFAPLFGTAVKRPDFLMLLESIGLIAIDVKNYVQFKHANQACYS LPYESELKRAVAFERLFRIPVWYAYFNRQDAGRSFHWISALKALEVGEIKPARDDNPEFLSIGLEHFEHVHSGGDIARLY THRLPSVANLSALVASKTPAAS >Mature_181_residues SAANLAGLGKQGEDAMNAWLQLHGFSYVAICQAPDTFAPLFGTAVKRPDFLMLLESIGLIAIDVKNYVQFKHANQACYSL PYESELKRAVAFERLFRIPVWYAYFNRQDAGRSFHWISALKALEVGEIKPARDDNPEFLSIGLEHFEHVHSGGDIARLYT HRLPSVANLSALVASKTPAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20196; Mature: 20065
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAANLAGLGKQGEDAMNAWLQLHGFSYVAICQAPDTFAPLFGTAVKRPDFLMLLESIGL CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCE IAIDVKNYVQFKHANQACYSLPYESELKRAVAFERLFRIPVWYAYFNRQDAGRSFHWISA EEEEHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHH LKALEVGEIKPARDDNPEFLSIGLEHFEHVHSGGDIARLYTHRLPSVANLSALVASKTPA HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCC AS CC >Mature Secondary Structure SAANLAGLGKQGEDAMNAWLQLHGFSYVAICQAPDTFAPLFGTAVKRPDFLMLLESIGL CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCE IAIDVKNYVQFKHANQACYSLPYESELKRAVAFERLFRIPVWYAYFNRQDAGRSFHWISA EEEEHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCHHHHHH LKALEVGEIKPARDDNPEFLSIGLEHFEHVHSGGDIARLYTHRLPSVANLSALVASKTPA HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCC AS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA