Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is kefC [H]
Identifier: 21244797
GI number: 21244797
Start: 4780372
End: 4782204
Strand: Direct
Name: kefC [H]
Synonym: XAC4080
Alternate gene names: 21244797
Gene position: 4780372-4782204 (Clockwise)
Preceding gene: 21244796
Following gene: 21244803
Centisome position: 92.36
GC content: 65.79
Gene sequence:
>1833_bases ATGCCTCAATGGAGAGTACGCATGCATAGCGGTGGTCTGGAACTGGCCTTGGTGCTGATGCTGGCCGCCATCGTGGCAGT GCCGGTGTTCAAGCGCTTCGGCCTGGGCGCGGTGTTGGCCTACCTGGTCGCCGGCGTGGTGCTCGGGCCCGATGGCGCGG GTGTCGTGCAGGATGCCGAACGCATCAGCGGCGCGGCCGAGATCGGCGTGGTGATGCTGCTGTTCGTGATCGGGCTGGAA CTGTCGCCGGCGCGTCTGAAGGTGATGCGCCATTCGGTGTTCGGCGCTGGCGCCACCCAGGTGCTGGTGACGGCGGTGAT CCTGGGCGGTTTGTTGATGGCAGCCCAGCTGGGCTGGAAGAGCGCGTTGATCGTCGGCGTGGCGCTGGCGCTTTCATCCA CCGCGGTGGGGCTGCAATTGCTGGCCGAACGCAAGGCGCTGAGCAGCGACTACGGACGGCTGGCGTTTGCCATTTTGCTG TTCCAGGATTTGATTGCGATCCCGTTGCTGGCGGCCATCCCGTTGCTCGGCGGCAGCAAGAACGCAACGCTCCAATGGCA GGACGTGGCCAAGGCGGTGGCGGCCCTGGCGCTGGTGATCGTGTGCGGGCGCTTTGTGTTGCGTCACCTGTTCAACGTGG TGGCGCGTACGCGCATGCCGGAAGTGTTCACCGCCAGCGCCTTGCTGGTGGTGCTGGGCACCGCCTGGATCATGCAGGAG GCCGGACTGAGCGCCAGCCTGGGCGCCTTCATCGCCGGCGTGTTGCTGGCCGATTCGGAGTTCCGCCACGAACTGGAATC GCAGATCGAACCGTTCGAAGGCTTGCTGCTGGGCCTGTTCTTCATCTCGGTGGGCATGGGGATCGATCTCCACCGCGTGG TGGCCGAGCCGTGGTTGATCGCAGCGGGCGTGGCGATATTGCTGGTGGTGAAGTTCTCGCTGCTGGTCGGCATCGGCAGC GTGGCCAAGCTGCCGCTGCGCAGCAGCCTGATGCTGGGCAGCGTGCTGTGGCTGGGCGGCGAATTCGCCTTCGTGGTGTT CAACGAAGCCGACCGCGTGGGCCTGCTGGAACCGGCCAATCACGATCGGCTGGTGGCCATCGTCGGCGTGTCGATGGCAT TGACCCCGCTGTTGCTGCTGGGCATGCAACGCATCCTCAACGGACCGCTGCGTGCGCGCGCACCCAAGACCGATCGCCCG TTCGACACCATCGATGCGCAGACCCCCAAGGTGCTGGTCGCCGGCATGGGCCGCTTCGGCCAGGTGGTCGCGCGCCTGCT CACCGCACGGCATGTGCCGTTCGTGGCGCTGGAACACAACCCCGACACGGTGGAAGACCTGCGTCGGTTCGGCAGCCAGC TCTATTACGGCGATCCCACCCGTCCCGAGCTGCTGCGCGCTGCCGGTGCCGAGCGCATCAAGGTGTTCGTGATCGCGGTG GACGACCCGGAAACCAACATCAAGACGGTGCGACTGATCCGTCGCCTGTACCCGCAAGCCACCGTGCTGGCGCGTGCACG CAACCGCCAACACGCCTGGAAATTGATGGACCTGGGCGCAGAACCGTTCCGCGAGGTATTCGCCTCCAGCCTGGAGCTGA GCGAGCGCGTACTCACCTCGCTCGGCCTGGGCGAAGCCCTCGCACACGATCACGTCAAACGCTTCCGCCAGCACGACGAA GACCTGCTGCGCCGCCAGCACCTGGTCTACGACGACGAAGCCAAGGTCATCCAGACCTCGCGCGATGCACGTGCCGACCT GATGAACCTGTTCGAAGCCGACGTCAGGGCGGATGTGGATGGGGAACCTGCACCCACCCTGCGGGAACGTTGA
Upstream 100 bases:
>100_bases GCCGCAGATAGGTGCCGGGCCGCATCGCGCAGCCGCGCATCGCCGCCGTGCAGATGGCACACGCGTGCGCGCAGGCCAAC GGACCTGCGCGGCATAATGC
Downstream 100 bases:
>100_bases GCTCTTCCGTAGGAGCGCGCCTGCGCGCGACCAGGTGTTTACCGGCAGAGTCCCGTCGCGCGCGGGCACGCTCCTACGCG GATGTGGTGCACCGGTCGTC
Product: glutathione-regulated potassium-efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MPQWRVRMHSGGLELALVLMLAAIVAVPVFKRFGLGAVLAYLVAGVVLGPDGAGVVQDAERISGAAEIGVVMLLFVIGLE LSPARLKVMRHSVFGAGATQVLVTAVILGGLLMAAQLGWKSALIVGVALALSSTAVGLQLLAERKALSSDYGRLAFAILL FQDLIAIPLLAAIPLLGGSKNATLQWQDVAKAVAALALVIVCGRFVLRHLFNVVARTRMPEVFTASALLVVLGTAWIMQE AGLSASLGAFIAGVLLADSEFRHELESQIEPFEGLLLGLFFISVGMGIDLHRVVAEPWLIAAGVAILLVVKFSLLVGIGS VAKLPLRSSLMLGSVLWLGGEFAFVVFNEADRVGLLEPANHDRLVAIVGVSMALTPLLLLGMQRILNGPLRARAPKTDRP FDTIDAQTPKVLVAGMGRFGQVVARLLTARHVPFVALEHNPDTVEDLRRFGSQLYYGDPTRPELLRAAGAERIKVFVIAV DDPETNIKTVRLIRRLYPQATVLARARNRQHAWKLMDLGAEPFREVFASSLELSERVLTSLGLGEALAHDHVKRFRQHDE DLLRRQHLVYDDEAKVIQTSRDARADLMNLFEADVRADVDGEPAPTLRER
Sequences:
>Translated_610_residues MPQWRVRMHSGGLELALVLMLAAIVAVPVFKRFGLGAVLAYLVAGVVLGPDGAGVVQDAERISGAAEIGVVMLLFVIGLE LSPARLKVMRHSVFGAGATQVLVTAVILGGLLMAAQLGWKSALIVGVALALSSTAVGLQLLAERKALSSDYGRLAFAILL FQDLIAIPLLAAIPLLGGSKNATLQWQDVAKAVAALALVIVCGRFVLRHLFNVVARTRMPEVFTASALLVVLGTAWIMQE AGLSASLGAFIAGVLLADSEFRHELESQIEPFEGLLLGLFFISVGMGIDLHRVVAEPWLIAAGVAILLVVKFSLLVGIGS VAKLPLRSSLMLGSVLWLGGEFAFVVFNEADRVGLLEPANHDRLVAIVGVSMALTPLLLLGMQRILNGPLRARAPKTDRP FDTIDAQTPKVLVAGMGRFGQVVARLLTARHVPFVALEHNPDTVEDLRRFGSQLYYGDPTRPELLRAAGAERIKVFVIAV DDPETNIKTVRLIRRLYPQATVLARARNRQHAWKLMDLGAEPFREVFASSLELSERVLTSLGLGEALAHDHVKRFRQHDE DLLRRQHLVYDDEAKVIQTSRDARADLMNLFEADVRADVDGEPAPTLRER >Mature_609_residues PQWRVRMHSGGLELALVLMLAAIVAVPVFKRFGLGAVLAYLVAGVVLGPDGAGVVQDAERISGAAEIGVVMLLFVIGLEL SPARLKVMRHSVFGAGATQVLVTAVILGGLLMAAQLGWKSALIVGVALALSSTAVGLQLLAERKALSSDYGRLAFAILLF QDLIAIPLLAAIPLLGGSKNATLQWQDVAKAVAALALVIVCGRFVLRHLFNVVARTRMPEVFTASALLVVLGTAWIMQEA GLSASLGAFIAGVLLADSEFRHELESQIEPFEGLLLGLFFISVGMGIDLHRVVAEPWLIAAGVAILLVVKFSLLVGIGSV AKLPLRSSLMLGSVLWLGGEFAFVVFNEADRVGLLEPANHDRLVAIVGVSMALTPLLLLGMQRILNGPLRARAPKTDRPF DTIDAQTPKVLVAGMGRFGQVVARLLTARHVPFVALEHNPDTVEDLRRFGSQLYYGDPTRPELLRAAGAERIKVFVIAVD DPETNIKTVRLIRRLYPQATVLARARNRQHAWKLMDLGAEPFREVFASSLELSERVLTSLGLGEALAHDHVKRFRQHDED LLRRQHLVYDDEAKVIQTSRDARADLMNLFEADVRADVDGEPAPTLRER
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=356, Percent_Identity=25.8426966292135, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1786232, Length=569, Percent_Identity=43.0579964850615, Blast_Score=431, Evalue=1e-122, Organism=Escherichia coli, GI1789749, Length=590, Percent_Identity=40.8474576271186, Blast_Score=397, Evalue=1e-111, Organism=Escherichia coli, GI1786685, Length=550, Percent_Identity=27.6363636363636, Blast_Score=147, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 65995; Mature: 65864
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQWRVRMHSGGLELALVLMLAAIVAVPVFKRFGLGAVLAYLVAGVVLGPDGAGVVQDAE CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCCHHHHHH RISGAAEIGVVMLLFVIGLELSPARLKVMRHSVFGAGATQVLVTAVILGGLLMAAQLGWK HHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHH SALIVGVALALSSTAVGLQLLAERKALSSDYGRLAFAILLFQDLIAIPLLAAIPLLGGSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NATLQWQDVAKAVAALALVIVCGRFVLRHLFNVVARTRMPEVFTASALLVVLGTAWIMQE CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AGLSASLGAFIAGVLLADSEFRHELESQIEPFEGLLLGLFFISVGMGIDLHRVVAEPWLI CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCHHHH AAGVAILLVVKFSLLVGIGSVAKLPLRSSLMLGSVLWLGGEFAFVVFNEADRVGLLEPAN HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC HDRLVAIVGVSMALTPLLLLGMQRILNGPLRARAPKTDRPFDTIDAQTPKVLVAGMGRFG CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHH QVVARLLTARHVPFVALEHNPDTVEDLRRFGSQLYYGDPTRPELLRAAGAERIKVFVIAV HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEEEEE DDPETNIKTVRLIRRLYPQATVLARARNRQHAWKLMDLGAEPFREVFASSLELSERVLTS CCCCCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LGLGEALAHDHVKRFRQHDEDLLRRQHLVYDDEAKVIQTSRDARADLMNLFEADVRADVD HCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCC GEPAPTLRER CCCCCCCCCC >Mature Secondary Structure PQWRVRMHSGGLELALVLMLAAIVAVPVFKRFGLGAVLAYLVAGVVLGPDGAGVVQDAE CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEECCCCCCHHHHHH RISGAAEIGVVMLLFVIGLELSPARLKVMRHSVFGAGATQVLVTAVILGGLLMAAQLGWK HHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHH SALIVGVALALSSTAVGLQLLAERKALSSDYGRLAFAILLFQDLIAIPLLAAIPLLGGSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NATLQWQDVAKAVAALALVIVCGRFVLRHLFNVVARTRMPEVFTASALLVVLGTAWIMQE CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AGLSASLGAFIAGVLLADSEFRHELESQIEPFEGLLLGLFFISVGMGIDLHRVVAEPWLI CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCHHHH AAGVAILLVVKFSLLVGIGSVAKLPLRSSLMLGSVLWLGGEFAFVVFNEADRVGLLEPAN HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC HDRLVAIVGVSMALTPLLLLGMQRILNGPLRARAPKTDRPFDTIDAQTPKVLVAGMGRFG CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHH QVVARLLTARHVPFVALEHNPDTVEDLRRFGSQLYYGDPTRPELLRAAGAERIKVFVIAV HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEEEEE DDPETNIKTVRLIRRLYPQATVLARARNRQHAWKLMDLGAEPFREVFASSLELSERVLTS CCCCCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LGLGEALAHDHVKRFRQHDEDLLRRQHLVYDDEAKVIQTSRDARADLMNLFEADVRADVD HCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCC GEPAPTLRER CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA