Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244756
Identifier: 21244756
GI number: 21244756
Start: 4731017
End: 4732009
Strand: Direct
Name: 21244756
Synonym: XAC4039
Alternate gene names: NA
Gene position: 4731017-4732009 (Clockwise)
Preceding gene: 21244754
Following gene: 77748752
Centisome position: 91.41
GC content: 71.9
Gene sequence:
>993_bases ATGACACAGACAGCAACCGCCCTGGTACTGGGCGCCAGTGGCGGCATCGGGGGCGAACTGGCGCGGCAACTGCGCGATGC AGGATGGCAGGTGCGTGCGTTGCAACGCGGGTTGGCGGCCACCGCCGAGCAGCGCGATGGCATCGACTGGCGCCGCGGCG ACGCCATGCAACGGCACGATGTCCTGCAGGCAGCGCACGGTTGTGCGGTGATCGTGCATGCGGTCAATCCGCCCGGCTAC CGGCGCTGGTCAGAGCTGGTGCTGCCGATGCTCGACAACAGTATCGCCGCGGCTCGCGCCGAAGGCGCCACCCTCGTGCT GCCTGGCACCGTCTACAACTACGGCCCCAGCGCCTATCCATCGCCGGACGAGGAGGCGCCGCAGACGCCGACCAGCCGCA AAGGCGCGATCCGGGTCGAGATGGAGCGCCGCCTGCAGGCCGCCACCGCGCACGGCGCGCGGGCGTTGATCGTGCGCGCC GGCGACTACTTCGGCCCGCGCGCGCGCAACAGCTGGTTCGCGCAGGGGCTGGTCACCGCAGGGCGCCCGGTCGCCACGGT GACCCTGCCCGGCGCGCCGGGCGTTGGCCATCAATGGGCCTACCTGCCCGACGTTGCGCAATGCATGCTGCGGCTGCTGC AGCGCCGCGACACGCTGCCAGCGTTCTGCCGCCTGCACATGGCCGGGCACTGGGATGCAGACGGTACGCAGATGGCCGCG GCGATCGGCCGGGTGGTCGTGCGCCACGGCGGCGCGCAACCAGCACTGCGCCGCTTTCCGTGGTGGGCACTGCCGCTGGC CAGCCCGTTCGTGCCGCTGGCACGCGAACTGCGCGAGATCCGCCCGCTGTGGCGCAACCCGCTGCGCCTGCGCAATACGC GCCTGCGCGAGGTACTGGGCGAGGAACCGCACACACCCCTGGACGACGCCGTCGAGGCGACGCTCGCCGGATTAGGCTGC CTGCCGACACCGTTGCTGGCACCAGCGCACTGA
Upstream 100 bases:
>100_bases TCGGCCATACATAAATGTATAGCTGCACGCGCAGCTTCGGCAATTTATTCGTAGCCACGGCTTATCCACACTGGCCGCAT CTCGACAGCGGAGCAGACCC
Downstream 100 bases:
>100_bases CCAGGAGCAGCTAACAAACGACTGCGCAGCCGCCAGGCGGGCGCGGCCGGTGCTCGGAATCGGCATGTACCACCCACACA CTGCGGTTCTGAGCGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Epimerase; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerases; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTQTATALVLGASGGIGGELARQLRDAGWQVRALQRGLAATAEQRDGIDWRRGDAMQRHDVLQAAHGCAVIVHAVNPPGY RRWSELVLPMLDNSIAAARAEGATLVLPGTVYNYGPSAYPSPDEEAPQTPTSRKGAIRVEMERRLQAATAHGARALIVRA GDYFGPRARNSWFAQGLVTAGRPVATVTLPGAPGVGHQWAYLPDVAQCMLRLLQRRDTLPAFCRLHMAGHWDADGTQMAA AIGRVVVRHGGAQPALRRFPWWALPLASPFVPLARELREIRPLWRNPLRLRNTRLREVLGEEPHTPLDDAVEATLAGLGC LPTPLLAPAH
Sequences:
>Translated_330_residues MTQTATALVLGASGGIGGELARQLRDAGWQVRALQRGLAATAEQRDGIDWRRGDAMQRHDVLQAAHGCAVIVHAVNPPGY RRWSELVLPMLDNSIAAARAEGATLVLPGTVYNYGPSAYPSPDEEAPQTPTSRKGAIRVEMERRLQAATAHGARALIVRA GDYFGPRARNSWFAQGLVTAGRPVATVTLPGAPGVGHQWAYLPDVAQCMLRLLQRRDTLPAFCRLHMAGHWDADGTQMAA AIGRVVVRHGGAQPALRRFPWWALPLASPFVPLARELREIRPLWRNPLRLRNTRLREVLGEEPHTPLDDAVEATLAGLGC LPTPLLAPAH >Mature_329_residues TQTATALVLGASGGIGGELARQLRDAGWQVRALQRGLAATAEQRDGIDWRRGDAMQRHDVLQAAHGCAVIVHAVNPPGYR RWSELVLPMLDNSIAAARAEGATLVLPGTVYNYGPSAYPSPDEEAPQTPTSRKGAIRVEMERRLQAATAHGARALIVRAG DYFGPRARNSWFAQGLVTAGRPVATVTLPGAPGVGHQWAYLPDVAQCMLRLLQRRDTLPAFCRLHMAGHWDADGTQMAAA IGRVVVRHGGAQPALRRFPWWALPLASPFVPLARELREIRPLWRNPLRLRNTRLREVLGEEPHTPLDDAVEATLAGLGCL PTPLLAPAH
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35807; Mature: 35675
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTATALVLGASGGIGGELARQLRDAGWQVRALQRGLAATAEQRDGIDWRRGDAMQRHD CCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH VLQAAHGCAVIVHAVNPPGYRRWSELVLPMLDNSIAAARAEGATLVLPGTVYNYGPSAYP HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCCC SPDEEAPQTPTSRKGAIRVEMERRLQAATAHGARALIVRAGDYFGPRARNSWFAQGLVTA CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHC GRPVATVTLPGAPGVGHQWAYLPDVAQCMLRLLQRRDTLPAFCRLHMAGHWDADGTQMAA CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHH AIGRVVVRHGGAQPALRRFPWWALPLASPFVPLARELREIRPLWRNPLRLRNTRLREVLG HHHHHHHHCCCCCHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC EEPHTPLDDAVEATLAGLGCLPTPLLAPAH CCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TQTATALVLGASGGIGGELARQLRDAGWQVRALQRGLAATAEQRDGIDWRRGDAMQRHD CCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH VLQAAHGCAVIVHAVNPPGYRRWSELVLPMLDNSIAAARAEGATLVLPGTVYNYGPSAYP HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCCC SPDEEAPQTPTSRKGAIRVEMERRLQAATAHGARALIVRAGDYFGPRARNSWFAQGLVTA CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHC GRPVATVTLPGAPGVGHQWAYLPDVAQCMLRLLQRRDTLPAFCRLHMAGHWDADGTQMAA CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHH AIGRVVVRHGGAQPALRRFPWWALPLASPFVPLARELREIRPLWRNPLRLRNTRLREVLG HHHHHHHHCCCCCHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC EEPHTPLDDAVEATLAGLGCLPTPLLAPAH CCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA