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The map label for this gene is yigB [H]

Identifier: 21244704

GI number: 21244704

Start: 4677987

End: 4678724

Strand: Direct

Name: yigB [H]

Synonym: XAC3986

Alternate gene names: 21244704

Gene position: 4677987-4678724 (Clockwise)

Preceding gene: 21244703

Following gene: 21244705

Centisome position: 90.39

GC content: 67.21

Gene sequence:

>738_bases
ATGAGCTTCCACATCCGCGCCATCACCCTCGACCTCGACGATACGTTGTGGCCCTTTGCGCCGATCGGGGCGCGGATCGA
TCAGGTGCTGTACGACTGGATGCGCGAGCACAGCCCGCTCACTGCCGAGCGCTTTCCGGTGGAGGCGATGCGCGAGCTGC
GTGAGCGCAGCTTTGTCGACAACCCGCACCTGCATCACGACCTCAGCGCGCTGCGCCGGTTGACGTTGGAAATGGCGTTG
CGCGAGAGCGGCGGCGATCTGGCGTTGCTGGAGCCGGCCTACGAGGTGTTCTATGCGGCGCGTAACCAGGTGGAATGCTA
CCCGGATGCGCTCGACGCGCTGGCGCGCATTGCCGCCCATGTGCCGGTGGCCGCGCTCAGCAACGGCAATGCCGATCTGC
AGCGCATCGGGCTGATGCACCACTTCGCGTTTCAATTGGGCTCGCGCGAACACGGCAGCGCAAAGCCCGACCCGAGCATC
TTCCTGGCCGCGTGCGCCCGGCTCGAGGTGCCTCCCGCGCAGGTGCTGCATGTGGGCGACCACGTGCGCATGGACGTGCT
GGGCGCACTGGATGCCGGCCTGCGCGCTTGCTGGATCAATCGCGAAGGCGCGGTGTGGTCGCACCCCACCCAGCAGCCGG
ATCTGCAATTCGACAGCATGACCGGGCTGGCCGATTGGCTGGACGCGCAGCAGCCGCATCCGGGCCCTATGAACGCCGGC
ATCACCCTTCCCGCCTGA

Upstream 100 bases:

>100_bases
CCGCGAATGGGGAATCGGGAGTTGGGAATCGCAACAGCAGAGGCGCCGCTCTACCCATTCTCGATTCCCGACTCTCCATC
CCCGGCATTACAATCAGGCG

Downstream 100 bases:

>100_bases
GCCACTGCGCGCGGCGCTGCACTTGAGGATTTCCATGTCCCATCTCACCGGTTTCATCGATCCCAACGCCGCAGCCTTGC
CGCTGTATGTGCTCGACCGC

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSFHIRAITLDLDDTLWPFAPIGARIDQVLYDWMREHSPLTAERFPVEAMRELRERSFVDNPHLHHDLSALRRLTLEMAL
RESGGDLALLEPAYEVFYAARNQVECYPDALDALARIAAHVPVAALSNGNADLQRIGLMHHFAFQLGSREHGSAKPDPSI
FLAACARLEVPPAQVLHVGDHVRMDVLGALDAGLRACWINREGAVWSHPTQQPDLQFDSMTGLADWLDAQQPHPGPMNAG
ITLPA

Sequences:

>Translated_245_residues
MSFHIRAITLDLDDTLWPFAPIGARIDQVLYDWMREHSPLTAERFPVEAMRELRERSFVDNPHLHHDLSALRRLTLEMAL
RESGGDLALLEPAYEVFYAARNQVECYPDALDALARIAAHVPVAALSNGNADLQRIGLMHHFAFQLGSREHGSAKPDPSI
FLAACARLEVPPAQVLHVGDHVRMDVLGALDAGLRACWINREGAVWSHPTQQPDLQFDSMTGLADWLDAQQPHPGPMNAG
ITLPA
>Mature_244_residues
SFHIRAITLDLDDTLWPFAPIGARIDQVLYDWMREHSPLTAERFPVEAMRELRERSFVDNPHLHHDLSALRRLTLEMALR
ESGGDLALLEPAYEVFYAARNQVECYPDALDALARIAAHVPVAALSNGNADLQRIGLMHHFAFQLGSREHGSAKPDPSIF
LAACARLEVPPAQVLHVGDHVRMDVLGALDAGLRACWINREGAVWSHPTQQPDLQFDSMTGLADWLDAQQPHPGPMNAGI
TLPA

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=204, Percent_Identity=31.3725490196078, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1790833, Length=218, Percent_Identity=28.8990825688073, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27212; Mature: 27081

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFHIRAITLDLDDTLWPFAPIGARIDQVLYDWMREHSPLTAERFPVEAMRELRERSFVD
CCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCCC
NPHLHHDLSALRRLTLEMALRESGGDLALLEPAYEVFYAARNQVECYPDALDALARIAAH
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VPVAALSNGNADLQRIGLMHHFAFQLGSREHGSAKPDPSIFLAACARLEVPPAQVLHVGD
CCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHEECCC
HVRMDVLGALDAGLRACWINREGAVWSHPTQQPDLQFDSMTGLADWLDAQQPHPGPMNAG
CHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
ITLPA
CCCCC
>Mature Secondary Structure 
SFHIRAITLDLDDTLWPFAPIGARIDQVLYDWMREHSPLTAERFPVEAMRELRERSFVD
CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCCC
NPHLHHDLSALRRLTLEMALRESGGDLALLEPAYEVFYAARNQVECYPDALDALARIAAH
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VPVAALSNGNADLQRIGLMHHFAFQLGSREHGSAKPDPSIFLAACARLEVPPAQVLHVGD
CCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHEECCC
HVRMDVLGALDAGLRACWINREGAVWSHPTQQPDLQFDSMTGLADWLDAQQPHPGPMNAG
CHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
ITLPA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]