Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244695
Identifier: 21244695
GI number: 21244695
Start: 4671268
End: 4671849
Strand: Direct
Name: 21244695
Synonym: XAC3977
Alternate gene names: NA
Gene position: 4671268-4671849 (Clockwise)
Preceding gene: 21244694
Following gene: 21244698
Centisome position: 90.26
GC content: 63.4
Gene sequence:
>582_bases ATGCCCTATCGCCAATTGCCATCTTCGAGCTACCTGCGGCCGCACGATGGCAGCCGCGGCGACCGCATGCCGTACGCGTA TCACGGCGACGTGGATTGGTCGCGATATCGCACCGCACTGATCGAGCCGGTGAGCATTTACCGCGGCCCCGATGCGCAAT TCGAAGACGTGCCCGAGCAGGACAAACGCATGCTTGCCGAGCTCATGCAACGCGAGTTCGGCGAGGCAATCGGCGAGCGC TGGCAGCCCACCACCGCCATCGGGCCCGACACCTTGCGTGTGCGGCTCACCTTGACCGGCGCCAAACCCAGCAAGCGGGT GCTCGGCACCTTCATGAAGGTCGATATCGGCGGCGGCTCCTACAACGCCGTGCAGGCCGCGCGTGGCAGGGAAGGCGCAT TCTCCGGCTCGGTCAGCTATGCGGTGGAAATCTTCGACGCGTCAAGCGATCGCTTGCTGGCGGCCTATGTCGAAAAGCAA TACCCCAATGCAATGAACATCAAGGCCAGCCTCGGTGCTTATGACGCGGCCAAGGCCGGGATCGGCCTGGGTGCGAAACA GTTTGTCGATGGCATGCGCTAG
Upstream 100 bases:
>100_bases CTCCTTCAGGTAGTTCCCCATGTCGGCTTGTTCATTCGTTCGATACTGCGCACTCGCCGTTGTCATCGTCGGCCTGATCG GCTGCGCCAGCACCCGCCCC
Downstream 100 bases:
>100_bases GCCTTGCTCCTTTTACTGCGTGCGCGATGCCTGTGCGTATCGGAGTGCTCGCACGCGATACTTTCGGGCAGTCCTCTCGC GCAGTGCAGAGTCATCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein; Secreted Protein
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MPYRQLPSSSYLRPHDGSRGDRMPYAYHGDVDWSRYRTALIEPVSIYRGPDAQFEDVPEQDKRMLAELMQREFGEAIGER WQPTTAIGPDTLRVRLTLTGAKPSKRVLGTFMKVDIGGGSYNAVQAARGREGAFSGSVSYAVEIFDASSDRLLAAYVEKQ YPNAMNIKASLGAYDAAKAGIGLGAKQFVDGMR
Sequences:
>Translated_193_residues MPYRQLPSSSYLRPHDGSRGDRMPYAYHGDVDWSRYRTALIEPVSIYRGPDAQFEDVPEQDKRMLAELMQREFGEAIGER WQPTTAIGPDTLRVRLTLTGAKPSKRVLGTFMKVDIGGGSYNAVQAARGREGAFSGSVSYAVEIFDASSDRLLAAYVEKQ YPNAMNIKASLGAYDAAKAGIGLGAKQFVDGMR >Mature_192_residues PYRQLPSSSYLRPHDGSRGDRMPYAYHGDVDWSRYRTALIEPVSIYRGPDAQFEDVPEQDKRMLAELMQREFGEAIGERW QPTTAIGPDTLRVRLTLTGAKPSKRVLGTFMKVDIGGGSYNAVQAARGREGAFSGSVSYAVEIFDASSDRLLAAYVEKQY PNAMNIKASLGAYDAAKAGIGLGAKQFVDGMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21263; Mature: 21132
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYRQLPSSSYLRPHDGSRGDRMPYAYHGDVDWSRYRTALIEPVSIYRGPDAQFEDVPEQ CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCHHHEECCCCCCCCCCCHH DKRMLAELMQREFGEAIGERWQPTTAIGPDTLRVRLTLTGAKPSKRVLGTFMKVDIGGGS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHEEEEEEECCCC YNAVQAARGREGAFSGSVSYAVEIFDASSDRLLAAYVEKQYPNAMNIKASLGAYDAAKAG CHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHC IGLGAKQFVDGMR CCCCHHHHHCCCC >Mature Secondary Structure PYRQLPSSSYLRPHDGSRGDRMPYAYHGDVDWSRYRTALIEPVSIYRGPDAQFEDVPEQ CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCHHHEECCCCCCCCCCCHH DKRMLAELMQREFGEAIGERWQPTTAIGPDTLRVRLTLTGAKPSKRVLGTFMKVDIGGGS HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHEEEEEEECCCC YNAVQAARGREGAFSGSVSYAVEIFDASSDRLLAAYVEKQYPNAMNIKASLGAYDAAKAG CHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHC IGLGAKQFVDGMR CCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA