Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244400
Identifier: 21244400
GI number: 21244400
Start: 4352856
End: 4353416
Strand: Direct
Name: 21244400
Synonym: XAC3675
Alternate gene names: NA
Gene position: 4352856-4353416 (Clockwise)
Preceding gene: 21244399
Following gene: 21244401
Centisome position: 84.1
GC content: 63.64
Gene sequence:
>561_bases ATGACCACCACGCCCGCGACCTCCGATCCGATCGCCGACACCCGCAGATGGATCGAACGCGCGGTGATCGGATTGAACCT GTGTCCGTTCGCCAAGGCGGTGTACGTCAAGGAGCAGGTGCGGCTGGTGCTCAGCGATGCCAGCACGCCCGAAGCCCTGC TGGAACAACTGGCCGAGGAACTAGTGCTGCTGCGCGATACACCGGCCGAACAGATCGACACCACGCTGATCGTGCACCCG GACGTGCTCACCGACTTCCTGGACTACAACGACTTTCTCGACAATGCCGATGCGGCGGTGGAAGCGCTGGACCTGCAAGG CGTGTTGCAGGTGGCCAGCTTCCATCCGGACTACCAGTTCGCAGGCGCGGCGCTGGACGATGTGGCCAACTTCACCAACC GCTCGCCCTTCCCCACCTTGCATCTGTTGCGCGAAGACAGCGTCGAGCGTGCAGTGGCGGCGTTCCCGGATCCGGATGTG ATTGTCGAACGCAATATCCAGACGCTCGAACGCCTGGGCAGCGACGGCTGGGAGCGCGTGTTGAACGGCGCCGAGCACTG A
Upstream 100 bases:
>100_bases CGCGACGGTGCCCACTAGCGCCCGGTGCTGCCAGCAACCACGCGCGCGGCCCGCCGCATAGCGATCGCATACACTGGCGC GCCATCCCGCTGCCGCCACG
Downstream 100 bases:
>100_bases GTGCTGCAGCTACCGCGCGGGACTGCAGGCGAGCGCGACTCTCGCCCATCTGCGCCCGCAGGGAGTCGACACAAAACATG GCGGAAGTTCTTCAACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTTTPATSDPIADTRRWIERAVIGLNLCPFAKAVYVKEQVRLVLSDASTPEALLEQLAEELVLLRDTPAEQIDTTLIVHP DVLTDFLDYNDFLDNADAAVEALDLQGVLQVASFHPDYQFAGAALDDVANFTNRSPFPTLHLLREDSVERAVAAFPDPDV IVERNIQTLERLGSDGWERVLNGAEH
Sequences:
>Translated_186_residues MTTTPATSDPIADTRRWIERAVIGLNLCPFAKAVYVKEQVRLVLSDASTPEALLEQLAEELVLLRDTPAEQIDTTLIVHP DVLTDFLDYNDFLDNADAAVEALDLQGVLQVASFHPDYQFAGAALDDVANFTNRSPFPTLHLLREDSVERAVAAFPDPDV IVERNIQTLERLGSDGWERVLNGAEH >Mature_185_residues TTTPATSDPIADTRRWIERAVIGLNLCPFAKAVYVKEQVRLVLSDASTPEALLEQLAEELVLLRDTPAEQIDTTLIVHPD VLTDFLDYNDFLDNADAAVEALDLQGVLQVASFHPDYQFAGAALDDVANFTNRSPFPTLHLLREDSVERAVAAFPDPDVI VERNIQTLERLGSDGWERVLNGAEH
Specific function: Unknown
COG id: COG3310
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20596; Mature: 20465
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPATSDPIADTRRWIERAVIGLNLCPFAKAVYVKEQVRLVLSDASTPEALLEQLAEE CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LVLLRDTPAEQIDTTLIVHPDVLTDFLDYNDFLDNADAAVEALDLQGVLQVASFHPDYQF HHHHCCCCHHHHCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH AGAALDDVANFTNRSPFPTLHLLREDSVERAVAAFPDPDVIVERNIQTLERLGSDGWERV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCHHHHHH LNGAEH HCCCCC >Mature Secondary Structure TTTPATSDPIADTRRWIERAVIGLNLCPFAKAVYVKEQVRLVLSDASTPEALLEQLAEE CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LVLLRDTPAEQIDTTLIVHPDVLTDFLDYNDFLDNADAAVEALDLQGVLQVASFHPDYQF HHHHCCCCHHHHCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH AGAALDDVANFTNRSPFPTLHLLREDSVERAVAAFPDPDVIVERNIQTLERLGSDGWERV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHCCHHHHHH LNGAEH HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA