Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is nonF

Identifier: 21244216

GI number: 21244216

Start: 4128191

End: 4128871

Strand: Reverse

Name: nonF

Synonym: XAC3491

Alternate gene names: NA

Gene position: 4128871-4128191 (Counterclockwise)

Preceding gene: 21244217

Following gene: 21244213

Centisome position: 79.78

GC content: 64.02

Gene sequence:

>681_bases
ATGAAAGTCTTGATGGTGCTGACGTCCCACGACCAGCTCGGCGACACCGGCAAGAAAACCGGGTTTTGGCTGGAAGAATT
CGCCGCGCCGTATTACGTGTTCAAGGATGCAGGCGCGGACATCACCCTGGTTTCGCCCAAGGGTGGCCAGCCGCCGCTGG
ATCCCAAGAGCGACGAGCCCGACGCACAAACCGACGCCACCAAGCGCTTCAAGCAGGATCCCGAGGCGCAACAAGCCCTG
GCAAGCACGCACCGTCTGGCCGACGTCAAGGCCGAGGACTTCGATGTGCTGTTCTACCCGGGCGGCCACGGCCCGCTCTG
GGATCTGGCCGAAGACGCCGATTCGATCGCGCTGATCGAAGCGTTTGCCGAGGCCGACAAGCCGCACGGTCTTGTGTGCC
ACGCACCAGGCGCGCTGCGTCGGGTCAAGGGCAGCGACGGCACGCCGCTGATCAATGGCCGCCGCGTCACCGGCTTCACC
AATAGCGAAGAAGAGGGCGTGGGCCTGACCAAGATCGTGCCGTTCCTGGTCGAAGACGTGCTGACCGAACTCGGCGGCAA
ATACGAAAAGGGCGCCGATTGGGGCGTGTACGTGGTCACCGACGGCACCCTGGTCACCGGTCAGAACCCGGCGTCTTCGG
AGAAAACCGCAGAAACGCTGCTGGCGCTGGCAAAGCGCTGA

Upstream 100 bases:

>100_bases
TGAACATGCAGCGGGTACCACGCGCTCTACACGAGGCTGCAACGGGCTGAACTGCACACTGGCCGCCTTGCCCAGTTGGG
CCATGACATGAGGCGATGCG

Downstream 100 bases:

>100_bases
TCTTTGCAATCGACGGGTCTTGAAAAAGCCCCGTTCCCTTCGGGACTCAAGGCATGGCCCGCGCGCTCCTGGTGCGCGGG
CCATGCTGCGCTTGCACTAG

Product: NonF-related protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfpI Family Transcriptional Regulator; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; C56 Family Peptidase; Transcriptional Regulator; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDPEAQQAL
ASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIEAFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFT
NSEEEGVGLTKIVPFLVEDVLTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR

Sequences:

>Translated_226_residues
MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDPEAQQAL
ASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIEAFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFT
NSEEEGVGLTKIVPFLVEDVLTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR
>Mature_226_residues
MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDPEAQQAL
ASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIEAFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFT
NSEEEGVGLTKIVPFLVEDVLTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=227, Percent_Identity=34.8017621145374, Blast_Score=94, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6324967, Length=232, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324975, Length=232, Percent_Identity=28.8793103448276, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323984, Length=232, Percent_Identity=28.448275862069, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24253; Mature: 24253

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEP
CEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCC
DAQTDATKRFKQDPEAQQALASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIE
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCHHHHHH
AFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFTNSEEEGVGLTKIVPFLVEDV
HHHHCCCCCCEEEECCHHHHCCCCCCCCCEECCEEEECCCCCCCCCCCHHHHHHHHHHHH
LTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR
HHHHCCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEP
CEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCC
DAQTDATKRFKQDPEAQQALASTHRLADVKAEDFDVLFYPGGHGPLWDLAEDADSIALIE
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCHHHHHH
AFAEADKPHGLVCHAPGALRRVKGSDGTPLINGRRVTGFTNSEEEGVGLTKIVPFLVEDV
HHHHCCCCCCEEEECCHHHHCCCCCCCCCEECCEEEECCCCCCCCCCCHHHHHHHHHHHH
LTELGGKYEKGADWGVYVVTDGTLVTGQNPASSEKTAETLLALAKR
HHHHCCCCCCCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA