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The map label for this gene is rob [C]

Identifier: 21244170

GI number: 21244170

Start: 4058597

End: 4059490

Strand: Reverse

Name: rob [C]

Synonym: XAC3445

Alternate gene names: 21244170

Gene position: 4059490-4058597 (Counterclockwise)

Preceding gene: 21244171

Following gene: 21244169

Centisome position: 78.44

GC content: 63.87

Gene sequence:

>894_bases
ATGCAACAGGTCATCACTGCAGATCGTGGGCTCGCGCTCGCGCTGGATAGCGCCAGCGAGTCGACATCGACCACTTGTCT
GGCGGTCTCGCGGCTCGGCAGCATCCGCACCAGCGCGGCGACATTCACGTTGTGGATTCAACTGCGTGGACGCGCATGGG
TGGAATCCAAGGAAGGCCGCTTTCGTCTGCGCGCCGGCGACTGGATCGCCTTCGACAAGGATTCCCATCCCACCGTGCAG
GCAGACCGCAGCGCGCTATGCGTAGGCGTCGGTCTGGATGGCGAGAGCCTGCAGTCGCTCGCTGAACTGACCGACGCCAC
GCTGTATCCCGGCCGTGCCCAGTTGTCGCGCGGCGATCTGCGCATCGCCTTGCGCTTGTGGCGCAATGCTGCCGCACAAA
GCGGCAGTGCGTCCGCGCGGCCGTTGCTGTTGCACCTGGCCGCGATGCAGCGCGATTTCATTGCGCAGGAACAGCGTTGC
CCGGGCCGCTCGCGCAGCCGTCGGCGTCAGGTGTTCGGGCGCATGCAGCGTGCGCGGCTGTACCTGGAAGGCAACAGCGA
CCGCGTGGTGCGCATCAGCGAACTGGCGCAGCTGACCAATTTTTCCAGCTGGTACGTCTCCAAGACGTTTCAGAGCTTGT
ACGAAGAAAGCCCGCAAGCGCTGTCGGCACGCTTGCGTCTGGAGCGTGCCTCCGATTTGTTGCGCGATACCTCGATGATG
ATCGGCGAGGTTGCAGCGGCAAGCGGCTTCGACAATTGCTGCAGCTTCGCGCGTGCGTTTCGTGCGCGCTTCGGTGTCTC
CGCATCGCACTACCGCGACCAAACGGCAAATCCGCCAGATTCGGCAAAGCCACGTAGCGTGACGCGCAAAGCGACGGCGT
TCACGCAATCGTAA

Upstream 100 bases:

>100_bases
AAGGCTTCGTGGCAATTTCGGCACAGTTTCGTCAAAACTTCCTGACCGACGCCACATTCGGCAAAACACTACGCCCTCTT
TTGTACAGGGGGCTGCCAAC

Downstream 100 bases:

>100_bases
TTTGCACAGGGGCGCTTAACGCGCCACTAACGAACCCTGGAGAGATTGATGAACCTTCGCACTTCCGCAGTGCGGCTGGG
CCTGTTGCCCGCCGGTATTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Hth Transcriptional Regulator

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQQVITADRGLALALDSASESTSTTCLAVSRLGSIRTSAATFTLWIQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPTVQ
ADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRGDLRIALRLWRNAAAQSGSASARPLLLHLAAMQRDFIAQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRSVTRKATAFTQS

Sequences:

>Translated_297_residues
MQQVITADRGLALALDSASESTSTTCLAVSRLGSIRTSAATFTLWIQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPTVQ
ADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRGDLRIALRLWRNAAAQSGSASARPLLLHLAAMQRDFIAQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRSVTRKATAFTQS
>Mature_297_residues
MQQVITADRGLALALDSASESTSTTCLAVSRLGSIRTSAATFTLWIQLRGRAWVESKEGRFRLRAGDWIAFDKDSHPTVQ
ADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRGDLRIALRLWRNAAAQSGSASARPLLLHLAAMQRDFIAQEQRC
PGRSRSRRRQVFGRMQRARLYLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRSVTRKATAFTQS

Specific function: Binds To The Right Arm Of The Replication Origin Oric Of The E.Coli Chromosome. Rob Binding May Influence The Formation Of The Nucleoprotein Structure, Required For Oric Function In The Initiation Of Replication. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32845; Mature: 32845

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVITADRGLALALDSASESTSTTCLAVSRLGSIRTSAATFTLWIQLRGRAWVESKEGR
CCCCEECCCCEEEEECCCCCCCCHHHHHHHHHCCHHCCCEEEEEEEEECCCEEEECCCCC
FRLRAGDWIAFDKDSHPTVQADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRGDL
EEEEECCEEEECCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCCCHH
RIALRLWRNAAAQSGSASARPLLLHLAAMQRDFIAQEQRCPGRSRSRRRQVFGRMQRARL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEE
YLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
EEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRSVTRKATAFTQS
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MQQVITADRGLALALDSASESTSTTCLAVSRLGSIRTSAATFTLWIQLRGRAWVESKEGR
CCCCEECCCCEEEEECCCCCCCCHHHHHHHHHCCHHCCCEEEEEEEEECCCEEEECCCCC
FRLRAGDWIAFDKDSHPTVQADRSALCVGVGLDGESLQSLAELTDATLYPGRAQLSRGDL
EEEEECCEEEECCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCCCHH
RIALRLWRNAAAQSGSASARPLLLHLAAMQRDFIAQEQRCPGRSRSRRRQVFGRMQRARL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEE
YLEGNSDRVVRISELAQLTNFSSWYVSKTFQSLYEESPQALSARLRLERASDLLRDTSMM
EEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IGEVAAASGFDNCCSFARAFRARFGVSASHYRDQTANPPDSAKPRSVTRKATAFTQS
HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA