Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is fhuE [H]
Identifier: 21244095
GI number: 21244095
Start: 3969337
End: 3971523
Strand: Reverse
Name: fhuE [H]
Synonym: XAC3370
Alternate gene names: 21244095
Gene position: 3971523-3969337 (Counterclockwise)
Preceding gene: 21244097
Following gene: 21244094
Centisome position: 76.74
GC content: 62.83
Gene sequence:
>2187_bases ATGAATCGTCCTACCGTAATGCGTCTCCTTCCCATTGCGCTGCGCCCGCGCGCGCTGTCGCATGCGGTGTTTGCCGCGCT GTGCACCCTGTCGGCAGGGCAGGCGTTGGCCGAAACGCCGGCCGGCGACGCGGAGGTCACCACCCTGGATCGGCTCAATG TGCAGGGCGAGCAGGTCAAGGGCTACACGGTGGAAAAGACCACCGCCGGCACTCGGATGAACCTGTCGCTGCGCGAGATT CCGCAGTCGGTCACGGTGGTCACGCGCGATCGCATGGACGACCAGAACCTGCAGAGCATCACCGATGTGCTCAACAACGT TACCGGCATTTCGGTTGCGCAGAGCGATAGCGAGCGGCTTGAGTTCTATGCGCGCGGGTTCTACATCGACAATTACCAGT TCGACGGCATTCCGGCCTACATGGAGCAGGCCTGGAGCTACGGCGATTCGGCGCTGGACGTGGCGCTGTACGACCGCGTG GAAGTGGTGCGCGGCGCGACCGGCCTGTTGACCGGTTCGGGTAATCCGTCGGCCTCGATCAACCTGGTGCGCAAGCATGC GGTCAGCCGCGATTTCACCGGCACCGTATCGGTGGGCGGCGGCGACTTCAACAAGACCCGCAGCGTGGCCGACGTCACGG TGCCGTTGAGCCCTGAAGGTACCGTGCGCGCGCGTGTGGTGGGCGTATACCAGGACGGCGAATCGGACATGGACCGCTAC AGCCTGCGCAAGAAGATCGGCTCGGCGATCATCGATGCCGACCTCACCGACAGCACGTTGCTGAGCGTGGGCTACGAATA CCAGAAGAAGGAATCGGATGATGTCACCTGGGGTGGCTTCCCGCTGTTCTACAGCGACGGCACGCGTACCGACTACAAGC GTTCGTTCAATCCGGCGGCCGACTGGACGTTCTGGGACACGCGTCTGCAGCGCACCTTCGCCAGCCTGCAGCAGAGCTTC GACAACGGTTGGACCCTCAAGGCCAATGTGAGCCACGAAAAGACCGAAGCGGCGAATCATCTGTTTTATCCGTACTACAC CATTTTCGGATTCGATCGCAGTACCGGTGCCGGCGTGGTGCCGTATTCGGGCAACTACCAGACAGAGCGCAAGGCCGATG GCGCCGACGTCTATGCGGAGGGCCCGTTCCGGCTGTTCGGTCGCGAACATCAGTTGGTCGCCGGCGCCAGCTACAACCGA CGCGAGTACGTCAACAACGGCACCTACGATTTCCCCGCGCCGCTGGACAGCTACCTCGGCTGGAACGGCGCGTATCCGGA GCCCAATTGGAGCCCGCGCACGGTACAGAGCGAAGGCACCATCACGCAGAAAGCCGCCTATGTGGCTGCGCGTTTCTCGC TGGCCGAGCCGCTGACCCTGCTGGTGGGGGCCCGCTATACCGACTGGCAGATCGATGGCCGCAACTTTGATTTCACCACC CAGCAGCTGCTGCCGTTCGCCGACACCCAGACCGAAGTCACTCCGTACGCCGGACTGGTGTACGACATCGACGATGTGTG GTCGACCTACGTCAGCTACACCGAGATCTTCAACCCGCAGACCTTGCGCGATGCCAACGGCGGCTACCTGGATCCGCTGA GCGGCAAGGGCTACGAAGCCGGCGTCAAGGCAGCGTGGTTCGACGATCAGCTCAACGCTTCGCTTGCGTTGTTCCGTATC GAGCAGGACAACCTCGGGGTGACGACCGGCGGCTTCGTTCCGGGCAGCAGCGAATCGGCGTACGAAGCGGCCAACGGCGT CGTCAGCGAAGGCTTCGATTTCGAGCTGTCCGGCCGCCTCACCCAGGGCTGGAATGCCACCTTCGGCGCTTCCCACTACA CTGCGCGCGACGACAGCGGCACCTCGATCAATACGCACCTGCCACGCACCACCATCAAGTTGTTCAGCAGCTACACCCCG CAGGGCGCATGGAGCGATCTGACCGTAGGCGGTGGCGTCAACTGGCAGAACCGTTCGTACTACGTGGACCCGGTGTACGG CAACTTCCAGCAGAGTGCCTACGCCCTGGTCAGCGCGTTCGCGCGCTATCGCCTGTCGCCGCAGTTCTCGGTGCAGCTCA ACGTGGACAACTTGCTCGACAAGCGCTATTACGCGCAGTTCAACGGCGGTTATGGCGCATGGGGCGCATCGCGTAACGGC ATGCTGACTTTCAATTACACGTTCTGA
Upstream 100 bases:
>100_bases AAAATGGCGCGCTGCCGCGGCTGCGCGGCGCGTCCTCCCCTTTGTTCGCCGTCCGGCACTGCCGTGATGGGTGCCCTCGA CTGTCTGTGCCGGAGCTGTG
Downstream 100 bases:
>100_bases TCACAGGCGGCGCCGGGCACGATCTCAGTGCCCGGATCGTTGCCGTCAAACCGCACAGGCACCTTGCGAAAGGCGCCTGT GTTTTTTGTAGCGGCTGGAT
Product: ferric iron uptake outer membrane protein
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MNRPTVMRLLPIALRPRALSHAVFAALCTLSAGQALAETPAGDAEVTTLDRLNVQGEQVKGYTVEKTTAGTRMNLSLREI PQSVTVVTRDRMDDQNLQSITDVLNNVTGISVAQSDSERLEFYARGFYIDNYQFDGIPAYMEQAWSYGDSALDVALYDRV EVVRGATGLLTGSGNPSASINLVRKHAVSRDFTGTVSVGGGDFNKTRSVADVTVPLSPEGTVRARVVGVYQDGESDMDRY SLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFPLFYSDGTRTDYKRSFNPAADWTFWDTRLQRTFASLQQSF DNGWTLKANVSHEKTEAANHLFYPYYTIFGFDRSTGAGVVPYSGNYQTERKADGADVYAEGPFRLFGREHQLVAGASYNR REYVNNGTYDFPAPLDSYLGWNGAYPEPNWSPRTVQSEGTITQKAAYVAARFSLAEPLTLLVGARYTDWQIDGRNFDFTT QQLLPFADTQTEVTPYAGLVYDIDDVWSTYVSYTEIFNPQTLRDANGGYLDPLSGKGYEAGVKAAWFDDQLNASLALFRI EQDNLGVTTGGFVPGSSESAYEAANGVVSEGFDFELSGRLTQGWNATFGASHYTARDDSGTSINTHLPRTTIKLFSSYTP QGAWSDLTVGGGVNWQNRSYYVDPVYGNFQQSAYALVSAFARYRLSPQFSVQLNVDNLLDKRYYAQFNGGYGAWGASRNG MLTFNYTF
Sequences:
>Translated_728_residues MNRPTVMRLLPIALRPRALSHAVFAALCTLSAGQALAETPAGDAEVTTLDRLNVQGEQVKGYTVEKTTAGTRMNLSLREI PQSVTVVTRDRMDDQNLQSITDVLNNVTGISVAQSDSERLEFYARGFYIDNYQFDGIPAYMEQAWSYGDSALDVALYDRV EVVRGATGLLTGSGNPSASINLVRKHAVSRDFTGTVSVGGGDFNKTRSVADVTVPLSPEGTVRARVVGVYQDGESDMDRY SLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFPLFYSDGTRTDYKRSFNPAADWTFWDTRLQRTFASLQQSF DNGWTLKANVSHEKTEAANHLFYPYYTIFGFDRSTGAGVVPYSGNYQTERKADGADVYAEGPFRLFGREHQLVAGASYNR REYVNNGTYDFPAPLDSYLGWNGAYPEPNWSPRTVQSEGTITQKAAYVAARFSLAEPLTLLVGARYTDWQIDGRNFDFTT QQLLPFADTQTEVTPYAGLVYDIDDVWSTYVSYTEIFNPQTLRDANGGYLDPLSGKGYEAGVKAAWFDDQLNASLALFRI EQDNLGVTTGGFVPGSSESAYEAANGVVSEGFDFELSGRLTQGWNATFGASHYTARDDSGTSINTHLPRTTIKLFSSYTP QGAWSDLTVGGGVNWQNRSYYVDPVYGNFQQSAYALVSAFARYRLSPQFSVQLNVDNLLDKRYYAQFNGGYGAWGASRNG MLTFNYTF >Mature_728_residues MNRPTVMRLLPIALRPRALSHAVFAALCTLSAGQALAETPAGDAEVTTLDRLNVQGEQVKGYTVEKTTAGTRMNLSLREI PQSVTVVTRDRMDDQNLQSITDVLNNVTGISVAQSDSERLEFYARGFYIDNYQFDGIPAYMEQAWSYGDSALDVALYDRV EVVRGATGLLTGSGNPSASINLVRKHAVSRDFTGTVSVGGGDFNKTRSVADVTVPLSPEGTVRARVVGVYQDGESDMDRY SLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFPLFYSDGTRTDYKRSFNPAADWTFWDTRLQRTFASLQQSF DNGWTLKANVSHEKTEAANHLFYPYYTIFGFDRSTGAGVVPYSGNYQTERKADGADVYAEGPFRLFGREHQLVAGASYNR REYVNNGTYDFPAPLDSYLGWNGAYPEPNWSPRTVQSEGTITQKAAYVAARFSLAEPLTLLVGARYTDWQIDGRNFDFTT QQLLPFADTQTEVTPYAGLVYDIDDVWSTYVSYTEIFNPQTLRDANGGYLDPLSGKGYEAGVKAAWFDDQLNASLALFRI EQDNLGVTTGGFVPGSSESAYEAANGVVSEGFDFELSGRLTQGWNATFGASHYTARDDSGTSINTHLPRTTIKLFSSYTP QGAWSDLTVGGGVNWQNRSYYVDPVYGNFQQSAYALVSAFARYRLSPQFSVQLNVDNLLDKRYYAQFNGGYGAWGASRNG MLTFNYTF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=734, Percent_Identity=43.8692098092643, Blast_Score=605, Evalue=1e-174, Organism=Escherichia coli, GI1786344, Length=703, Percent_Identity=23.4708392603129, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80499; Mature: 80499
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00617 RECF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPTVMRLLPIALRPRALSHAVFAALCTLSAGQALAETPAGDAEVTTLDRLNVQGEQVK CCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCCCEEC GYTVEKTTAGTRMNLSLREIPQSVTVVTRDRMDDQNLQSITDVLNNVTGISVAQSDSERL CEEEEECCCCCEEEEEHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHE EFYARGFYIDNYQFDGIPAYMEQAWSYGDSALDVALYDRVEVVRGATGLLTGSGNPSASI EEEEEEEEEECEEECCCHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCCEE NLVRKHAVSRDFTGTVSVGGGDFNKTRSVADVTVPLSPEGTVRARVVGVYQDGESDMDRY HHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCHHHHH SLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFPLFYSDGTRTDYKRSFNPAA HHHHHHHHHEEECCCCCCHHHHCCCHHHCCCCCCCEECCEEEEECCCCCCCHHHCCCCCC DWTFWDTRLQRTFASLQQSFDNGWTLKANVSHEKTEAANHLFYPYYTIFGFDRSTGAGVV CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCEEEEEEEEEEECCCCCCCEEE PYSGNYQTERKADGADVYAEGPFRLFGREHQLVAGASYNRREYVNNGTYDFPAPLDSYLG CCCCCCCCCCCCCCCCEEECCCCEECCCCEEEEECCCCCCHHHCCCCCCCCCCCHHHHCC WNGAYPEPNWSPRTVQSEGTITQKAAYVAARFSLAEPLTLLVGARYTDWQIDGRNFDFTT CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCEEECCCCCCCCH QQLLPFADTQTEVTPYAGLVYDIDDVWSTYVSYTEIFNPQTLRDANGGYLDPLSGKGYEA HHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEECCCCCEECCCCCCCCCC GVKAAWFDDQLNASLALFRIEQDNLGVTTGGFVPGSSESAYEAANGVVSEGFDFELSGRL CCEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCCCHHHHHCCHHHCCCCEEECCCE TQGWNATFGASHYTARDDSGTSINTHLPRTTIKLFSSYTPQGAWSDLTVGGGVNWQNRSY ECCCCCCCCCCCEECCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCE YVDPVYGNFQQSAYALVSAFARYRLSPQFSVQLNVDNLLDKRYYAQFNGGYGAWGASRNG EECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCEEEEECCCEEECCCCCCC MLTFNYTF EEEEEECC >Mature Secondary Structure MNRPTVMRLLPIALRPRALSHAVFAALCTLSAGQALAETPAGDAEVTTLDRLNVQGEQVK CCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCCCEEC GYTVEKTTAGTRMNLSLREIPQSVTVVTRDRMDDQNLQSITDVLNNVTGISVAQSDSERL CEEEEECCCCCEEEEEHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHE EFYARGFYIDNYQFDGIPAYMEQAWSYGDSALDVALYDRVEVVRGATGLLTGSGNPSASI EEEEEEEEEECEEECCCHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCEEEECCCCCCCEE NLVRKHAVSRDFTGTVSVGGGDFNKTRSVADVTVPLSPEGTVRARVVGVYQDGESDMDRY HHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCHHHHH SLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFPLFYSDGTRTDYKRSFNPAA HHHHHHHHHEEECCCCCCHHHHCCCHHHCCCCCCCEECCEEEEECCCCCCCHHHCCCCCC DWTFWDTRLQRTFASLQQSFDNGWTLKANVSHEKTEAANHLFYPYYTIFGFDRSTGAGVV CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCEEEEEEEEEEECCCCCCCEEE PYSGNYQTERKADGADVYAEGPFRLFGREHQLVAGASYNRREYVNNGTYDFPAPLDSYLG CCCCCCCCCCCCCCCCEEECCCCEECCCCEEEEECCCCCCHHHCCCCCCCCCCCHHHHCC WNGAYPEPNWSPRTVQSEGTITQKAAYVAARFSLAEPLTLLVGARYTDWQIDGRNFDFTT CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCEEECCCCCCCCH QQLLPFADTQTEVTPYAGLVYDIDDVWSTYVSYTEIFNPQTLRDANGGYLDPLSGKGYEA HHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEECCCCCEECCCCCCCCCC GVKAAWFDDQLNASLALFRIEQDNLGVTTGGFVPGSSESAYEAANGVVSEGFDFELSGRL CCEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCCCHHHHHCCHHHCCCCEEECCCE TQGWNATFGASHYTARDDSGTSINTHLPRTTIKLFSSYTPQGAWSDLTVGGGVNWQNRSY ECCCCCCCCCCCEECCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCE YVDPVYGNFQQSAYALVSAFARYRLSPQFSVQLNVDNLLDKRYYAQFNGGYGAWGASRNG EECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCEEEEECCCEEECCCCCCC MLTFNYTF EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]