Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is gshB
Identifier: 21243830
GI number: 21243830
Start: 3646078
End: 3647028
Strand: Direct
Name: gshB
Synonym: XAC3103
Alternate gene names: 21243830
Gene position: 3646078-3647028 (Clockwise)
Preceding gene: 77748695
Following gene: 21243831
Centisome position: 70.45
GC content: 67.93
Gene sequence:
>951_bases ATGTCGCTCGACGTCGTTGTGGTGATGGATCCCATCGCCTCCATCAAGATCGCCAAAGACACTACGTTTGCCATGTTGCT GGAAGCCCAGCGCCGTGGCCACCGTCTGCACTACGTGCGCCCCGGCGGGCTCAGCCTGCGCGAAGGGCGCGCGGTGGCGC AGGTGGCGCCGCTGAGCGTGCGCGAGGACAAGACCAGCTGGTTCACGCTGGGCGAGTTCGCCGAACTGGCGTTCGGGCCC GGCCAGGTGGTGCTGATGCGCAAGGACCCGCCGGTGGATGCGGAGTTCGTCTACGACACCCAGGTCCTGAGCGTGGCGCA GCGCGCCGGCGCGCAGATCGTCAACGACCCGCAGGGACTGCGCGACTACAACGAGAAGCTGGCCGCACTGCTGTTTCCGC AATGCTGCCCGCCGACCCTGGTCAGCCGCGATGCCGCCGCGCTCAAGGCCTTCGTGCTGGAACATGGCCAGGCGGTGCTC AAGCCGCTCGATGGCATGGGCGGACGCTCGATCTTCCGCAGCGGCAGCGGCGACCCCAACCTCAACGTGATCCTGGAAAC GCTGACCGACGGCAACCGCAAACTGACCCTGGCGCAGCGCTTCATCCCCGACATCACTGCCGGCGACAAGCGCATCCTGC TGGTGGACGGCTTGCCGGTGGATTACTGCCTGGCGCGGATTCCGCAGGGCGACGAATTCCGCGGCAACCTGGCCGCCGGC GGGCGCGGCGAAGGCCGGCCATTGTCCGAACGCGACCGCTGGATCGCCGCGCAGGTAGGCCCGGAAATGCGCCGTCGCGG CATGCGCTTCGTCGGCCTGGACGTGATCGGCGATTACCTGACCGAGGTCAACGTCACCAGCCCCACCTGCGTGCGCGAAC TGGATGCGCAGTTCGGCCTGAACATCGCCGGGCTGCTGTTCGATGCGATCGAGGCCGGCGCCGCGCAATGA
Upstream 100 bases:
>100_bases GTGCGTCCCGGCCGGCAAGTCGCGCACTACGACCCGCCGGGCGCGCCATCGCCCATCGCTTGAAGTTACCATCGGCAGCC TGTTCGAAAGGTTTAGCCCC
Downstream 100 bases:
>100_bases GCACGGCCGCGGCCCTGCCGGCACCGATGGACGACGGTCGCCGGCTGATGATGACGCTGGTGATCTCGCTGCTGCTGCAT GGCGTGCTGATCCTGGGGGT
Product: glutathione synthetase
Products: NA
Alternate protein names: GSH synthetase; GSH-S; GSHase; Glutathione synthase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSLDVVVVMDPIASIKIAKDTTFAMLLEAQRRGHRLHYVRPGGLSLREGRAVAQVAPLSVREDKTSWFTLGEFAELAFGP GQVVLMRKDPPVDAEFVYDTQVLSVAQRAGAQIVNDPQGLRDYNEKLAALLFPQCCPPTLVSRDAAALKAFVLEHGQAVL KPLDGMGGRSIFRSGSGDPNLNVILETLTDGNRKLTLAQRFIPDITAGDKRILLVDGLPVDYCLARIPQGDEFRGNLAAG GRGEGRPLSERDRWIAAQVGPEMRRRGMRFVGLDVIGDYLTEVNVTSPTCVRELDAQFGLNIAGLLFDAIEAGAAQ
Sequences:
>Translated_316_residues MSLDVVVVMDPIASIKIAKDTTFAMLLEAQRRGHRLHYVRPGGLSLREGRAVAQVAPLSVREDKTSWFTLGEFAELAFGP GQVVLMRKDPPVDAEFVYDTQVLSVAQRAGAQIVNDPQGLRDYNEKLAALLFPQCCPPTLVSRDAAALKAFVLEHGQAVL KPLDGMGGRSIFRSGSGDPNLNVILETLTDGNRKLTLAQRFIPDITAGDKRILLVDGLPVDYCLARIPQGDEFRGNLAAG GRGEGRPLSERDRWIAAQVGPEMRRRGMRFVGLDVIGDYLTEVNVTSPTCVRELDAQFGLNIAGLLFDAIEAGAAQ >Mature_315_residues SLDVVVVMDPIASIKIAKDTTFAMLLEAQRRGHRLHYVRPGGLSLREGRAVAQVAPLSVREDKTSWFTLGEFAELAFGPG QVVLMRKDPPVDAEFVYDTQVLSVAQRAGAQIVNDPQGLRDYNEKLAALLFPQCCPPTLVSRDAAALKAFVLEHGQAVLK PLDGMGGRSIFRSGSGDPNLNVILETLTDGNRKLTLAQRFIPDITAGDKRILLVDGLPVDYCLARIPQGDEFRGNLAAGG RGEGRPLSERDRWIAAQVGPEMRRRGMRFVGLDVIGDYLTEVNVTSPTCVRELDAQFGLNIAGLLFDAIEAGAAQ
Specific function: Glutathione biosynthesis; second step. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain
Homologues:
Organism=Escherichia coli, GI1789316, Length=310, Percent_Identity=56.7741935483871, Blast_Score=357, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GSHB_XANAC (Q8PHZ5)
Other databases:
- EMBL: AE008923 - RefSeq: NP_643412.1 - ProteinModelPortal: Q8PHZ5 - SMR: Q8PHZ5 - GeneID: 1157174 - GenomeReviews: AE008923_GR - KEGG: xac:XAC3103 - NMPDR: fig|190486.1.peg.3056 - HOGENOM: HBG624526 - OMA: WMRKDPP - ProtClustDB: PRK05246 - BioCyc: XAXO190486:XAC3103-MONOMER - BRENDA: 6.3.2.3 - HAMAP: MF_00162 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006284 - InterPro: IPR004218 - InterPro: IPR004215 - InterPro: IPR013817 - InterPro: IPR016185 - Gene3D: G3DSA:3.30.1490.20 - Gene3D: G3DSA:3.30.470.20 - Gene3D: G3DSA:3.40.50.20 - TIGRFAMs: TIGR01380
Pfam domain/function: PF02955 GSH-S_ATP; PF02951 GSH-S_N; SSF52440 PreATP-grasp-like
EC number: =6.3.2.3
Molecular weight: Translated: 34322; Mature: 34191
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDVVVVMDPIASIKIAKDTTFAMLLEAQRRGHRLHYVRPGGLSLREGRAVAQVAPLSV CCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCEE REDKTSWFTLGEFAELAFGPGQVVLMRKDPPVDAEFVYDTQVLSVAQRAGAQIVNDPQGL ECCCCCEEEHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCEECCCCHHH RDYNEKLAALLFPQCCPPTLVSRDAAALKAFVLEHGQAVLKPLDGMGGRSIFRSGSGDPN HHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCC LNVILETLTDGNRKLTLAQRFIPDITAGDKRILLVDGLPVDYCLARIPQGDEFRGNLAAG CEEEEEEECCCCEEEEEHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCC GRGEGRPLSERDRWIAAQVGPEMRRRGMRFVGLDVIGDYLTEVNVTSPTCVRELDAQFGL CCCCCCCCCHHHCEEEECCCHHHHHCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCC NIAGLLFDAIEAGAAQ CHHHHHHHHHHCCCCC >Mature Secondary Structure SLDVVVVMDPIASIKIAKDTTFAMLLEAQRRGHRLHYVRPGGLSLREGRAVAQVAPLSV CEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCEE REDKTSWFTLGEFAELAFGPGQVVLMRKDPPVDAEFVYDTQVLSVAQRAGAQIVNDPQGL ECCCCCEEEHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCEECCCCHHH RDYNEKLAALLFPQCCPPTLVSRDAAALKAFVLEHGQAVLKPLDGMGGRSIFRSGSGDPN HHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCC LNVILETLTDGNRKLTLAQRFIPDITAGDKRILLVDGLPVDYCLARIPQGDEFRGNLAAG CEEEEEEECCCCEEEEEHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCC GRGEGRPLSERDRWIAAQVGPEMRRRGMRFVGLDVIGDYLTEVNVTSPTCVRELDAQFGL CCCCCCCCCHHHCEEEECCCHHHHHCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCC NIAGLLFDAIEAGAAQ CHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217