Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is aguA [H]
Identifier: 21243037
GI number: 21243037
Start: 2691565
End: 2692599
Strand: Direct
Name: aguA [H]
Synonym: XAC2302
Alternate gene names: 21243037
Gene position: 2691565-2692599 (Clockwise)
Preceding gene: 21243036
Following gene: 21243038
Centisome position: 52.01
GC content: 65.6
Gene sequence:
>1035_bases ATGACCGACCGTCTTCGCTTTCCCGCCGAGTGGGAACCCCAATCCGCCGTGTTGGTCGCGTGGCCGCATGCCGGTACCGA TTGGGCCGAGCGCCTGGCCGACGTGGAAGAAACCTATATTGCGCTGGTCACGGCGATCTCCCGCTTCGAGCCGGTGGTCA TCTGTGTGGCCGACGACGACCTGCAGATCTATGCCGAGGCGCGGCTGCGTTCGGCGCGGGTGGACATGACGCGCGTGCGT TTCGTGATCGCCGCCTACAACGACACCTGGCTGCGCGATTCGGGCCCGATCACACTGCGCCAGGAAGCCGGCTTCCGGTT GATGGATTTCCGTTTCACCGGTTGGGGCGGCAAGTTCGAAGCCAGCCTGGACGATCAGTTGGTGAGCTCGCTGGATGCCG CACAGGTGTTCGTGCCGGCGCAGGTGGAGACCGTCGACTTCGCCCTGGAAGGCGGCGCAATCGAGACCGATGGCGCCGGC ACCCTGCTGACCACCTGGAAGTGCCTGCATGAGCGGCACCCGCAGCGCACGCGCGAATCGCTCAGCAGCGATCTGGCCAC ATGGCTGGCGCAGGAGCGCGTGCTGTGGCTGGATCATGGCTACCTGGAAGGCGACGATACCGACGCGCATATCGATACGT TGGCGCGCTTTGCCGGCCCGGATGCGATCGTCTATCAAGGCTGCGATGTGGCCAGCGATTCGCATTACGTCGAGCTGCAG GCGATGGGCGCCGAACTGGCAGCGCTACGCAAGGCCGACGGGCAGCCGTATCGGCTATTTGTGCTGCCGTGGGCACAGCC CATTCTCGACGAAGGCCGCCGGCTGGCTGCGTCGTATGCCAATTTTTTGATCGTCAACGGCGCGGTGCTGATGCCGGCCT ATGGGGATGCGGCCGATGCAACCGCGCAGGCGGTGCTGGCGCAGGCATTCCCGCACCACGAGATCGTGCCGGTGCCGTGC CGTGCGCTGATCTGGCAGAACGGCAGCCTGCATTGCCTGACCATGCAATTGCCGGCCGGCCTGCTCGCGGCCTGA
Upstream 100 bases:
>100_bases CGGCGATCAGCGCCTGGATCGCAAGAGCCCGCATCAACGTGCGGGATATCGTTGAACGTGCGGGCGATGGCCCGCACACC AAGATGAGTATTTGCCTGGC
Downstream 100 bases:
>100_bases GCGCAGTTGCAAACCTCGCCTGCGTTGCGGCCGCACAGACCGCGCGTGGCTCCTGTTCCGGCCGGCAGGCCGGTGTTACG CCATGGCGCGCTACCTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Agmatine iminohydrolase [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTDRLRFPAEWEPQSAVLVAWPHAGTDWAERLADVEETYIALVTAISRFEPVVICVADDDLQIYAEARLRSARVDMTRVR FVIAAYNDTWLRDSGPITLRQEAGFRLMDFRFTGWGGKFEASLDDQLVSSLDAAQVFVPAQVETVDFALEGGAIETDGAG TLLTTWKCLHERHPQRTRESLSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGPDAIVYQGCDVASDSHYVELQ AMGAELAALRKADGQPYRLFVLPWAQPILDEGRRLAASYANFLIVNGAVLMPAYGDAADATAQAVLAQAFPHHEIVPVPC RALIWQNGSLHCLTMQLPAGLLAA
Sequences:
>Translated_344_residues MTDRLRFPAEWEPQSAVLVAWPHAGTDWAERLADVEETYIALVTAISRFEPVVICVADDDLQIYAEARLRSARVDMTRVR FVIAAYNDTWLRDSGPITLRQEAGFRLMDFRFTGWGGKFEASLDDQLVSSLDAAQVFVPAQVETVDFALEGGAIETDGAG TLLTTWKCLHERHPQRTRESLSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGPDAIVYQGCDVASDSHYVELQ AMGAELAALRKADGQPYRLFVLPWAQPILDEGRRLAASYANFLIVNGAVLMPAYGDAADATAQAVLAQAFPHHEIVPVPC RALIWQNGSLHCLTMQLPAGLLAA >Mature_343_residues TDRLRFPAEWEPQSAVLVAWPHAGTDWAERLADVEETYIALVTAISRFEPVVICVADDDLQIYAEARLRSARVDMTRVRF VIAAYNDTWLRDSGPITLRQEAGFRLMDFRFTGWGGKFEASLDDQLVSSLDAAQVFVPAQVETVDFALEGGAIETDGAGT LLTTWKCLHERHPQRTRESLSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGPDAIVYQGCDVASDSHYVELQA MGAELAALRKADGQPYRLFVLPWAQPILDEGRRLAASYANFLIVNGAVLMPAYGDAADATAQAVLAQAFPHHEIVPVPCR ALIWQNGSLHCLTMQLPAGLLAA
Specific function: Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine [H]
COG id: COG2957
COG function: function code E; Peptidylarginine deiminase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the agmatine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017754 - InterPro: IPR007466 [H]
Pfam domain/function: PF04371 PAD_porph [H]
EC number: =3.5.3.12 [H]
Molecular weight: Translated: 37967; Mature: 37836
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRLRFPAEWEPQSAVLVAWPHAGTDWAERLADVEETYIALVTAISRFEPVVICVADDD CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC LQIYAEARLRSARVDMTRVRFVIAAYNDTWLRDSGPITLRQEAGFRLMDFRFTGWGGKFE EEEEEHHHHHHHHCCHHHEEEEEEECCCCEECCCCCEEEECCCCCEEEEEEEECCCCEEE ASLDDQLVSSLDAAQVFVPAQVETVDFALEGGAIETDGAGTLLTTWKCLHERHPQRTRES CCHHHHHHHCCCHHEEEECCEEEEEEEEEECCEEECCCCCHHHHHHHHHHHCCCHHHHHH LSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGPDAIVYQGCDVASDSHYVELQ HHHHHHHHHHHCCEEEEECCEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEE AMGAELAALRKADGQPYRLFVLPWAQPILDEGRRLAASYANFLIVNGAVLMPAYGDAADA ECCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEECCEEEECCCCCCCHH TAQAVLAQAFPHHEIVPVPCRALIWQNGSLHCLTMQLPAGLLAA HHHHHHHHHCCCCCEECCCCCEEEECCCCEEEEEEECCCHHHCC >Mature Secondary Structure TDRLRFPAEWEPQSAVLVAWPHAGTDWAERLADVEETYIALVTAISRFEPVVICVADDD CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC LQIYAEARLRSARVDMTRVRFVIAAYNDTWLRDSGPITLRQEAGFRLMDFRFTGWGGKFE EEEEEHHHHHHHHCCHHHEEEEEEECCCCEECCCCCEEEECCCCCEEEEEEEECCCCEEE ASLDDQLVSSLDAAQVFVPAQVETVDFALEGGAIETDGAGTLLTTWKCLHERHPQRTRES CCHHHHHHHCCCHHEEEECCEEEEEEEEEECCEEECCCCCHHHHHHHHHHHCCCHHHHHH LSSDLATWLAQERVLWLDHGYLEGDDTDAHIDTLARFAGPDAIVYQGCDVASDSHYVELQ HHHHHHHHHHHCCEEEEECCEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEE AMGAELAALRKADGQPYRLFVLPWAQPILDEGRRLAASYANFLIVNGAVLMPAYGDAADA ECCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEECCEEEECCCCCCCHH TAQAVLAQAFPHHEIVPVPCRALIWQNGSLHCLTMQLPAGLLAA HHHHHHHHHCCCCCEECCCCCEEEECCCCEEEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA