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The map label for this gene is 21242401

Identifier: 21242401

GI number: 21242401

Start: 1903275

End: 1903871

Strand: Reverse

Name: 21242401

Synonym: XAC1651

Alternate gene names: NA

Gene position: 1903871-1903275 (Counterclockwise)

Preceding gene: 21242402

Following gene: 21242397

Centisome position: 36.79

GC content: 68.68

Gene sequence:

>597_bases
ATGCGCAGGAGGCCGGCCATGTCCGTCACTTCGAATCCTTCATCCACTCATCCATCGTCGTTGCCGCGACACGGCCGGCG
CCCCCAAGAGCGGCAGCAGAACGTGGCGAGCGACGGCGCGTCGCCCTGGATGTGGGCAACGTTGGTGGCGCTGCTCGTCG
TGGTGCCCAGCTGGTGGTGGGCACGCCACAGCGATGAGTCATTCGCTCCCGATACGCGGCCGCTGCCGGTGGAAAGTCGG
CAGATCCTGCCAACGACCGATGGCCCGCGCGCGATGACGATGGTGGCGCACCAGCCTGCTCGCCCAGCGATCAGCAGCGT
AGAAGCCAAGCCGCTCCCGGGCAACGCAATGCCGAGCTACCCCGCCGCCGTGGCGCGTGCCGGCATCCAGGGCAGCCGCA
CCGCACGTCTGCAACTGGATGTACAGGGCCGGGTGAGCGATGTGACCATCGTCGAGCGGAGCGGGAGTGACGACCCGCGG
CTGGATGCAGCGGTGATGGAGAGCTTGCATCGGTGGCGCTTCGAGCCCGCCACGCGCGACGGCCACGCAGTGGTGAGCAG
CGTGCAGGTGCCGGTGGAATTCACCGCGCAGCGGTGA

Upstream 100 bases:

>100_bases
TTGACTAAGCTGAACATCCGGCAAGCTCTAGCGCTTCCTCTACCGGCTGCCTTAGCTCTCCCTCAGGTATCGCCAACCAG
ACTGGTCCCGTCATCCCCAG

Downstream 100 bases:

>100_bases
GGACTTGCTCAGCGCTGCGGCTTTTTGCCCTCAACGTTTGCCCTCAACGGTAGAGATGTCGCGGGCGTCGTTTGACTCCT
GACTCGCTGGCAGACCCTGC

Product: TonB-like protein

Products: NA

Alternate protein names: NB Dependent Receptor Protein; NB Domain-Containing Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRRRPAMSVTSNPSSTHPSSLPRHGRRPQERQQNVASDGASPWMWATLVALLVVVPSWWWARHSDESFAPDTRPLPVESR
QILPTTDGPRAMTMVAHQPARPAISSVEAKPLPGNAMPSYPAAVARAGIQGSRTARLQLDVQGRVSDVTIVERSGSDDPR
LDAAVMESLHRWRFEPATRDGHAVVSSVQVPVEFTAQR

Sequences:

>Translated_198_residues
MRRRPAMSVTSNPSSTHPSSLPRHGRRPQERQQNVASDGASPWMWATLVALLVVVPSWWWARHSDESFAPDTRPLPVESR
QILPTTDGPRAMTMVAHQPARPAISSVEAKPLPGNAMPSYPAAVARAGIQGSRTARLQLDVQGRVSDVTIVERSGSDDPR
LDAAVMESLHRWRFEPATRDGHAVVSSVQVPVEFTAQR
>Mature_198_residues
MRRRPAMSVTSNPSSTHPSSLPRHGRRPQERQQNVASDGASPWMWATLVALLVVVPSWWWARHSDESFAPDTRPLPVESR
QILPTTDGPRAMTMVAHQPARPAISSVEAKPLPGNAMPSYPAAVARAGIQGSRTARLQLDVQGRVSDVTIVERSGSDDPR
LDAAVMESLHRWRFEPATRDGHAVVSSVQVPVEFTAQR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21749; Mature: 21749

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRPAMSVTSNPSSTHPSSLPRHGRRPQERQQNVASDGASPWMWATLVALLVVVPSWWW
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
ARHSDESFAPDTRPLPVESRQILPTTDGPRAMTMVAHQPARPAISSVEAKPLPGNAMPSY
HCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCC
PAAVARAGIQGSRTARLQLDVQGRVSDVTIVERSGSDDPRLDAAVMESLHRWRFEPATRD
HHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
GHAVVSSVQVPVEFTAQR
CHHHHHHEECCEEEECCC
>Mature Secondary Structure
MRRRPAMSVTSNPSSTHPSSLPRHGRRPQERQQNVASDGASPWMWATLVALLVVVPSWWW
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH
ARHSDESFAPDTRPLPVESRQILPTTDGPRAMTMVAHQPARPAISSVEAKPLPGNAMPSY
HCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCC
PAAVARAGIQGSRTARLQLDVQGRVSDVTIVERSGSDDPRLDAAVMESLHRWRFEPATRD
HHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
GHAVVSSVQVPVEFTAQR
CHHHHHHEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA