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The map label for this gene is yedY [H]

Identifier: 21242397

GI number: 21242397

Start: 1898181

End: 1899200

Strand: Reverse

Name: yedY [H]

Synonym: XAC1647

Alternate gene names: 21242397

Gene position: 1899200-1898181 (Counterclockwise)

Preceding gene: 21242401

Following gene: 21242396

Centisome position: 36.7

GC content: 63.73

Gene sequence:

>1020_bases
TTGTGTCCTGGTTCGTTACTCTTACCGCTGCAGCCACTGCCGGAGCCTGCCATGTCGTTTCGCGATGCTTTGAACTTGCC
GTCCAGCGAGATCACCGACGAGTCCGTTTACCGCGACCGTCGCCGGCTGCTGCAGTTATTGGCGCTGACCCCGGCGCTGG
GCGTGGCCGGGTGCGCCGAGGCCGACCCGCCTCCGCCGCCCAAGACCGTGGTGACGCCGGCGCAGGCGCGCAGCGGGTTC
CGCACGGCAGAGGAACTGACCCGGCTGGAAGACGTCACCAGCTACAACAACTTCTACGAGTTCGGCACCGACAAGACCGA
TCCGTCCAAGGCGGCCAAGACCTTGAAGCTGTCGCCTTGGACGGTGAAGGTGGGCGGCGAATGCGAGAAGCCCGGCAGCC
TGTCGCTGGACGAACTGCTCAAGGGCATCGCGTCGGAAGAACGCATCTACCGGCTGCGGTGCGTGGAAGGCTGGTCGATG
GTGATCCCGTGGACGGGCGTGCCGCTGGGCGAGGTACTCAAGCGCTTCGCGCCGACCTCCAAGGCGAAGTACGTGGCATT
CACCACCCTGGCCGACCCGCAACAGATGCCGGGCGTGCGCTACCGTTCGATCAACTGGCCATATCGCGAAGGCTTGCGCA
TCGACGAGGCGATGCATCCGCTGACCCTGCTGGCCACCGGCCTGTACGGCAAGCCGCTGCCGCAGCAGAACGGCGCGCCG
CTGCGGCTGGTGGTGCCGTGGAAGTACGGCTTCAAGAGCATCAAATCGATCGTGGAAATCCGTTTCGTCGAAAAAATGCC
CGAGACCGCCTGGCACGATCTGCAACCTTCCGAATACGGCTTCTTTTCCAACGTCAATCCAGCGGTGGACCACCCGCGCT
GGAGCCAGAAGACCGAACGCCGCATCGCCGGCACCGCCAGCAAGCTGTTTGCCGAACGCATCGCGACAAAGCCCTTCAAC
GGGTATGCCGATCAGGTCGCTTCGTTGTATGCGGGCATGGATCTGAAGAAGTGGTTCTAG

Upstream 100 bases:

>100_bases
TAGTATGCCGCAGCGCATCGGGCTTGGCAGCGGACAAAAAAGTTGCAGCTGCATCCTTTTGACTGAGCCTGACGTAACGT
AGCGATGCGCCAAGGCGAAC

Downstream 100 bases:

>100_bases
GCAACACACACTCTGACATCGACCCGGCGTAGGAGCGCACCCGGGCGCGACTGGCTTTATCGGTCATGCCAGTCGCGCCC
GGGTGCGCTCCTACGCTTCA

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MCPGSLLLPLQPLPEPAMSFRDALNLPSSEITDESVYRDRRRLLQLLALTPALGVAGCAEADPPPPPKTVVTPAQARSGF
RTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPWTVKVGGECEKPGSLSLDELLKGIASEERIYRLRCVEGWSM
VIPWTGVPLGEVLKRFAPTSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAP
LRLVVPWKYGFKSIKSIVEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFN
GYADQVASLYAGMDLKKWF

Sequences:

>Translated_339_residues
MCPGSLLLPLQPLPEPAMSFRDALNLPSSEITDESVYRDRRRLLQLLALTPALGVAGCAEADPPPPPKTVVTPAQARSGF
RTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPWTVKVGGECEKPGSLSLDELLKGIASEERIYRLRCVEGWSM
VIPWTGVPLGEVLKRFAPTSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAP
LRLVVPWKYGFKSIKSIVEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFN
GYADQVASLYAGMDLKKWF
>Mature_339_residues
MCPGSLLLPLQPLPEPAMSFRDALNLPSSEITDESVYRDRRRLLQLLALTPALGVAGCAEADPPPPPKTVVTPAQARSGF
RTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPWTVKVGGECEKPGSLSLDELLKGIASEERIYRLRCVEGWSM
VIPWTGVPLGEVLKRFAPTSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAP
LRLVVPWKYGFKSIKSIVEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFN
GYADQVASLYAGMDLKKWF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=329, Percent_Identity=51.3677811550152, Blast_Score=317, Evalue=6e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37902; Mature: 37902

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPGSLLLPLQPLPEPAMSFRDALNLPSSEITDESVYRDRRRLLQLLALTPALGVAGCAE
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ADPPPPPKTVVTPAQARSGFRTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPW
CCCCCCCCCEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCE
TVKVGGECEKPGSLSLDELLKGIASEERIYRLRCVEGWSMVIPWTGVPLGEVLKRFAPTS
EEEECCCCCCCCCCCHHHHHHHHHCHHHEEEEEEECCCEEEECCCCCCHHHHHHHHCCCC
KAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAP
CCCEEEEEECCCHHHCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
LRLVVPWKYGFKSIKSIVEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTER
EEEEECCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RIAGTASKLFAERIATKPFNGYADQVASLYAGMDLKKWF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MCPGSLLLPLQPLPEPAMSFRDALNLPSSEITDESVYRDRRRLLQLLALTPALGVAGCAE
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ADPPPPPKTVVTPAQARSGFRTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPW
CCCCCCCCCEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCE
TVKVGGECEKPGSLSLDELLKGIASEERIYRLRCVEGWSMVIPWTGVPLGEVLKRFAPTS
EEEECCCCCCCCCCCHHHHHHHHHCHHHEEEEEEECCCEEEECCCCCCHHHHHHHHCCCC
KAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAP
CCCEEEEEECCCHHHCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
LRLVVPWKYGFKSIKSIVEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTER
EEEEECCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RIAGTASKLFAERIATKPFNGYADQVASLYAGMDLKKWF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]