Click here to switch to the map view.

The map label for this gene is paiB [H]

Identifier: 21242365

GI number: 21242365

Start: 1861501

End: 1862151

Strand: Reverse

Name: paiB [H]

Synonym: XAC1615

Alternate gene names: 21242365

Gene position: 1862151-1861501 (Counterclockwise)

Preceding gene: 21242366

Following gene: 21242354

Centisome position: 35.98

GC content: 65.28

Gene sequence:

>651_bases
GTGGCCGCGCCTGACATGTACGCCCCACGCGCATTTGCGCAGACCGATCTGGCCTTGCTGGACTGGCTGTTCGCGCGCGA
TGCGTTCGTCACCCTGATCAGCCAGCGCGAGGACGGGCAGTTGGCGATCTCGCACCTGCCGGTGCTGTATCAGCGCGATG
GCCAGGATGTCGTGATCGAGGGCCATTGGGCACGCCCCAATCCGCAGGCGCGCGCTCCTGGCGATGCGGTAATGGTGTTG
CAGGGCCCGCATGCCTATGTCTCGCCCACTTGGTACCTGGACAAGGACGCGGCTGCGCGCGTGCCCACCTGGAACTACGC
TGTCGCGCACCTGCATGGACGCTGCAGCCAGGTGAGCGATGAGGAGGCGCTGGGCAGTTTGATCGCGCGCATGAGCGCGC
ACTTCGAGCAGCGCGTGGGCAGCGATTGGCAGTTCGAAATGGAGCGCGACAGTCATCGCCGACAATTGCGCGGCCTGGTC
GGCTTCCGCTTCGTTCCAAGCCGCATCGAGCTCACCTTCAAACTGAGCCAGAACCACCCGGCGGGCAATCAACGCAGTGT
CGCCCAGTTCCTGACGCAGCAAGCCGACCAAGACGCGCACGCGATCGCAGCATTGATGCAGGCGGCGCTGCATGCCGAAA
CCAGGCGCTGA

Upstream 100 bases:

>100_bases
GAAGAAGACGCGCTCATCCGCGGCTTTTCGCTGCATGAAGTCTCGCCACCCCAAGGTAACGACGATGCCGAGCTGCGCGC
GCGCATGGTCGTGAACATGG

Downstream 100 bases:

>100_bases
GAAGCCGCAGGCGCATTGTCGGACGCGTGTCACAGATAGACGGACACATCGGCCAGGCTGTCGGCCGACACCTGCAACGA
CCTGGGCACAGGTCATTGCA

Product: transcriptional regulator protein Pai2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MAAPDMYAPRAFAQTDLALLDWLFARDAFVTLISQREDGQLAISHLPVLYQRDGQDVVIEGHWARPNPQARAPGDAVMVL
QGPHAYVSPTWYLDKDAAARVPTWNYAVAHLHGRCSQVSDEEALGSLIARMSAHFEQRVGSDWQFEMERDSHRRQLRGLV
GFRFVPSRIELTFKLSQNHPAGNQRSVAQFLTQQADQDAHAIAALMQAALHAETRR

Sequences:

>Translated_216_residues
MAAPDMYAPRAFAQTDLALLDWLFARDAFVTLISQREDGQLAISHLPVLYQRDGQDVVIEGHWARPNPQARAPGDAVMVL
QGPHAYVSPTWYLDKDAAARVPTWNYAVAHLHGRCSQVSDEEALGSLIARMSAHFEQRVGSDWQFEMERDSHRRQLRGLV
GFRFVPSRIELTFKLSQNHPAGNQRSVAQFLTQQADQDAHAIAALMQAALHAETRR
>Mature_215_residues
AAPDMYAPRAFAQTDLALLDWLFARDAFVTLISQREDGQLAISHLPVLYQRDGQDVVIEGHWARPNPQARAPGDAVMVLQ
GPHAYVSPTWYLDKDAAARVPTWNYAVAHLHGRCSQVSDEEALGSLIARMSAHFEQRVGSDWQFEMERDSHRRQLRGLVG
FRFVPSRIELTFKLSQNHPAGNQRSVAQFLTQQADQDAHAIAALMQAALHAETRR

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 24280; Mature: 24148

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPDMYAPRAFAQTDLALLDWLFARDAFVTLISQREDGQLAISHLPVLYQRDGQDVVIE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCEEEECCCCEEEEE
GHWARPNPQARAPGDAVMVLQGPHAYVSPTWYLDKDAAARVPTWNYAVAHLHGRCSQVSD
CCCCCCCCCCCCCCCEEEEEECCCCEECCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCH
EEALGSLIARMSAHFEQRVGSDWQFEMERDSHRRQLRGLVGFRFVPSRIELTFKLSQNHP
HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHEECCCEEEEEEEECCCCC
AGNQRSVAQFLTQQADQDAHAIAALMQAALHAETRR
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAPDMYAPRAFAQTDLALLDWLFARDAFVTLISQREDGQLAISHLPVLYQRDGQDVVIE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCEEEECCCCEEEEE
GHWARPNPQARAPGDAVMVLQGPHAYVSPTWYLDKDAAARVPTWNYAVAHLHGRCSQVSD
CCCCCCCCCCCCCCCEEEEEECCCCEECCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCH
EEALGSLIARMSAHFEQRVGSDWQFEMERDSHRRQLRGLVGFRFVPSRIELTFKLSQNHP
HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHEECCCEEEEEEEECCCCC
AGNQRSVAQFLTQQADQDAHAIAALMQAALHAETRR
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]