Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is phoU [H]
Identifier: 21242323
GI number: 21242323
Start: 1818581
End: 1819291
Strand: Reverse
Name: phoU [H]
Synonym: XAC1573
Alternate gene names: 21242323
Gene position: 1819291-1818581 (Counterclockwise)
Preceding gene: 77748596
Following gene: 21242321
Centisome position: 35.15
GC content: 63.43
Gene sequence:
>711_bases ATGAACCAGCACCTCAACGACCATATCGTCAAAAGCTACGACGAGGAGCAGCACCGTCTCGTCGCCGAGATCGTGCGCAT GGGCGAGACGGCGGTGGCGCAGCTGGAAGCCGCACTGGATGTGGTGGAGCGTCGCGATGACAATGCCGCGCACCGCATCG TGGTCAACGACGAGGCGATCGATGCGCTGGAGCACGCGATCAGCCACGACGTGATGCGACTTGCATTGCGCGGCCCGATG GCGCGCGATCTGCGCGAAATTCTTGCAGGCCTGCGGATTCCGGCCGATATCGAACGTATTGGCGATTACGCGGCCAACGT GGCCAAGCGCTCGATCGCGCTCAATTCCGCACCGCCGCTGCCGCAGACCGTGGGCCTGCGCGCGCTCGGCCAGATGGCGG CCGATGCGGTGCGAGAAGCCGTACAGGCGTATCGCAACAAGGATGCCGATGCGGCGATCCGTGTCCGCGACGAAGATGCG CGCCTGGATGCGCAGTACACCGCGTTGTTCCGCGAGCTGCTCACCTACATGATGGAAGACCCGCGCAATATCACCCCGTG TACGCATCTGCTGTTCATGGCAAAGAATCTGGAACGCATTGGCGACCACGCCACCAACATCGCCGAGAACGTGTGGTTCC TGGTGCATGGCGAGCAACCCTTGCCTCCGCGCGTGAAGCGCGACGACACCAGCAGTACCGGCGTCGTCTAG
Upstream 100 bases:
>100_bases TGACGCAGTTCCGCCACACCGCCCGGCACGACATTTGCATCATGTGCCATGTCGCCAAGGTTACGGCGGACATCCACCAC TGCCACGAATCGAGATCACG
Downstream 100 bases:
>100_bases ACCCCGGCAGCGCTGCCGTGAGGCGCCGGAACGCCTTCTCATTACGTATTCAGCTTGAAACTTCTACCGTGCAGGTGCAC AGGCATTTCCTGTGACCCAG
Product: phosphate regulon transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAIDALEHAISHDVMRLALRGPM ARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPLPQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDA RLDAQYTALFRELLTYMMEDPRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVV
Sequences:
>Translated_236_residues MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAIDALEHAISHDVMRLALRGPM ARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPLPQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDA RLDAQYTALFRELLTYMMEDPRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVV >Mature_236_residues MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAIDALEHAISHDVMRLALRGPM ARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPLPQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDA RLDAQYTALFRELLTYMMEDPRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVV
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=216, Percent_Identity=32.4074074074074, Blast_Score=132, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26378; Mature: 26378
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAI CCCCHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHH DALEHAISHDVMRLALRGPMARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC PQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDARLDAQYTALFRELLTYMMED CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHC PRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNQHLNDHIVKSYDEEQHRLVAEIVRMGETAVAQLEAALDVVERRDDNAAHRIVVNDEAI CCCCHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHH DALEHAISHDVMRLALRGPMARDLREILAGLRIPADIERIGDYAANVAKRSIALNSAPPL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC PQTVGLRALGQMAADAVREAVQAYRNKDADAAIRVRDEDARLDAQYTALFRELLTYMMED CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHC PRNITPCTHLLFMAKNLERIGDHATNIAENVWFLVHGEQPLPPRVKRDDTSSTGVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]