Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242249
Identifier: 21242249
GI number: 21242249
Start: 1729027
End: 1729929
Strand: Reverse
Name: 21242249
Synonym: XAC1497
Alternate gene names: NA
Gene position: 1729929-1729027 (Counterclockwise)
Preceding gene: 21242250
Following gene: 21242248
Centisome position: 33.43
GC content: 49.94
Gene sequence:
>903_bases ATGCATTGGAGAGATATGCGCACAAAATTAGGAGTTTTAATTGTTGCGGCCATGGCGATATGTGGCCAAGCAAAAGCTCA GGTAGCTTGTGACGGCTGTTCAGCCGCAGAGATGTTCGCACAAGGGCAATCATTAGTAACTAAGGTTGCTTACCGCAGCG CTCACCCCCCGGTTTACATTACCAACATACAAGATGGCACTGTTATCAAGGTGATGTATGGCCACAATGTAAATCAGAAC TTTAATTGGGAAACCGATGTTTTCAGGGCTTGGGGTATCAACTCTCCCCTAGAACCACAAGTCGGTCAGTTCATATCCGC AATTCATGCTCAAATGCCGCCTGGCGGGCAGGTGGTGCTTGGCTCTTCCGCAGCGGCGACATCGGCGTCTCGTAGCAGGA TCAGCGCAGCAGCAGCAGCTGACTATCCACAATCAGCTTATGAAGCAATCGCTAGCCCATCATACGACGTAGTTATTCAC AATCGCGTAGAAGGGTCTTTGGCAGGCGCTATTAATTCGTATCAGCAAGGTTTGTTAGCTATGCCCCTCATTAAGGGCTT CAATGCTGCGGCTGTTCCGATATCTGTGCGCGTTGTATTTGCTGATGGAACTACGGCGCGCTATATCTGGAAACCTGAGA CGAAGATGTGGACTCGTATCCCCGGGACTGCACGTGACAACTTCAACAATATCATTCCAGAAACGGTGCAAGATATCACG GGTGGCGGCTATCGCGAGTATGTGTTTGGCCAAGGAAGCAGCAACGACTTGACGCAATTCACTGCTCGTCTCACCCACAT GGGTGTGCCTGTCGGAACTGCTGGTGGCACAGGCAATCGAGTTAAGATTGGCTGCTCCTCCGTAAACAACGGCCCTCCAA TTTGTGAGATCATGATTTATTAA
Upstream 100 bases:
>100_bases GATTTAAAATAATTCATATGCGCCCTTTGCATGATTAACTTGGATTGGAAAAAATCCCCCTCGCCTCAACTCAAATATTC ATTTTATTTTCCGCTAACGG
Downstream 100 bases:
>100_bases TGAGGATCGCTGGGAGGCAATGCCTCCCAGCTTTTTAATTATGCAAAAAAGAAATTTATCCATTGCAGTAATATTTTCCG TTATCGTGCTAGCTAGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MHWRDMRTKLGVLIVAAMAICGQAKAQVACDGCSAAEMFAQGQSLVTKVAYRSAHPPVYITNIQDGTVIKVMYGHNVNQN FNWETDVFRAWGINSPLEPQVGQFISAIHAQMPPGGQVVLGSSAAATSASRSRISAAAAADYPQSAYEAIASPSYDVVIH NRVEGSLAGAINSYQQGLLAMPLIKGFNAAAVPISVRVVFADGTTARYIWKPETKMWTRIPGTARDNFNNIIPETVQDIT GGGYREYVFGQGSSNDLTQFTARLTHMGVPVGTAGGTGNRVKIGCSSVNNGPPICEIMIY
Sequences:
>Translated_300_residues MHWRDMRTKLGVLIVAAMAICGQAKAQVACDGCSAAEMFAQGQSLVTKVAYRSAHPPVYITNIQDGTVIKVMYGHNVNQN FNWETDVFRAWGINSPLEPQVGQFISAIHAQMPPGGQVVLGSSAAATSASRSRISAAAAADYPQSAYEAIASPSYDVVIH NRVEGSLAGAINSYQQGLLAMPLIKGFNAAAVPISVRVVFADGTTARYIWKPETKMWTRIPGTARDNFNNIIPETVQDIT GGGYREYVFGQGSSNDLTQFTARLTHMGVPVGTAGGTGNRVKIGCSSVNNGPPICEIMIY >Mature_300_residues MHWRDMRTKLGVLIVAAMAICGQAKAQVACDGCSAAEMFAQGQSLVTKVAYRSAHPPVYITNIQDGTVIKVMYGHNVNQN FNWETDVFRAWGINSPLEPQVGQFISAIHAQMPPGGQVVLGSSAAATSASRSRISAAAAADYPQSAYEAIASPSYDVVIH NRVEGSLAGAINSYQQGLLAMPLIKGFNAAAVPISVRVVFADGTTARYIWKPETKMWTRIPGTARDNFNNIIPETVQDIT GGGYREYVFGQGSSNDLTQFTARLTHMGVPVGTAGGTGNRVKIGCSSVNNGPPICEIMIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32032; Mature: 32032
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHWRDMRTKLGVLIVAAMAICGQAKAQVACDGCSAAEMFAQGQSLVTKVAYRSAHPPVYI CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCEEE TNIQDGTVIKVMYGHNVNQNFNWETDVFRAWGINSPLEPQVGQFISAIHAQMPPGGQVVL EECCCCCEEEEEECCCCCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEE GSSAAATSASRSRISAAAAADYPQSAYEAIASPSYDVVIHNRVEGSLAGAINSYQQGLLA CCCHHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCHHH MPLIKGFNAAAVPISVRVVFADGTTARYIWKPETKMWTRIPGTARDNFNNIIPETVQDIT HHHHCCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHC GGGYREYVFGQGSSNDLTQFTARLTHMGVPVGTAGGTGNRVKIGCSSVNNGPPICEIMIY CCCEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEEC >Mature Secondary Structure MHWRDMRTKLGVLIVAAMAICGQAKAQVACDGCSAAEMFAQGQSLVTKVAYRSAHPPVYI CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCEEE TNIQDGTVIKVMYGHNVNQNFNWETDVFRAWGINSPLEPQVGQFISAIHAQMPPGGQVVL EECCCCCEEEEEECCCCCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEE GSSAAATSASRSRISAAAAADYPQSAYEAIASPSYDVVIHNRVEGSLAGAINSYQQGLLA CCCHHHCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCHHH MPLIKGFNAAAVPISVRVVFADGTTARYIWKPETKMWTRIPGTARDNFNNIIPETVQDIT HHHHCCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHC GGGYREYVFGQGSSNDLTQFTARLTHMGVPVGTAGGTGNRVKIGCSSVNNGPPICEIMIY CCCEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA