Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21242248

Identifier: 21242248

GI number: 21242248

Start: 1728027

End: 1729007

Strand: Reverse

Name: 21242248

Synonym: XAC1496

Alternate gene names: NA

Gene position: 1729007-1728027 (Counterclockwise)

Preceding gene: 21242249

Following gene: 21242244

Centisome position: 33.41

GC content: 48.62

Gene sequence:

>981_bases
ATGCCTCCCAGCTTTTTAATTATGCAAAAAAGAAATTTATCCATTGCAGTAATATTTTCCGTTATCGTGCTAGCTAGCGC
AGGCGGATTAATTTATCAGCGTTCAAAAAAAGAAGAACACAACTTTGAAGCTAACGTGCAAGCACGAGCTTCGCACGAGT
CACCCGCTAAACCTTCTCGGGCAACCGCCCCACTGCCACCGGGAAATACTCCCTTCCGTCTAGTGGCCGACAACTTGAAA
GCACGCGCGCTTAAAGGCGATGCCGGTGCTGCATGCCGCCTGGCATTGGAGTATCAAAAATGCAATTTGGCTCAGCAACA
GATCAGCCATGCAGATGATGTAACGTCTACAAGTCAGGACGAAAGCGACGGTGTGCCAGAAATCGCTCTGCCCTTAGATA
AGGCGAAATTTTACGCCAACTTGGCCCATTGCGAAGGCACTGAAGAGGTCAATGCTTCAGAAATTTCCAGGATGTGGCGG
CGGTCTGCCGAAAATGGAAACTTAGCCGCCATGGTCAACTACGCAGCAGGTAATGCATTTTCCGTAGCCTCTACCTTAGA
TACTGCTGAGGAGCTGATTATCTATCGAAAGATCGCGCCGCAGATTTCCCGGTCGGCAATTAATCGTGGAAGTGGGTTAG
CTCTCCTGAGTTTAGCAGCAGCCTATCAGCCTGAGAACCAAGTGGGAATTCGGTCATACCTGTCACAAGCGGTGGGAGCT
GACATTCAGCAGTCTCTCACGCTGTATAAAATGGCAAAAATGGCTGCCACAGGTAGTGATCAGGAGGTCAGTCGTTTTAT
TGATGATCAAATCGAAAAGCTTGATAGGCGGGCGTCGGCTCTCCAAAGATCGCAGTCTGACTATGAAGCTCGCGAAAGGG
TAAGCACTATTGGAAAAATTAACTTGCCCTCTGCAAGGGACATTGCTTGGCTAAGGATAGGATCCGCACCTAGTATCGAT
TTAAAGGATTGCGAAGACTAG

Upstream 100 bases:

>100_bases
GGTGGCACAGGCAATCGAGTTAAGATTGGCTGCTCCTCCGTAAACAACGGCCCTCCAATTTGTGAGATCATGATTTATTA
ATGAGGATCGCTGGGAGGCA

Downstream 100 bases:

>100_bases
CATTAGCGGAACACCAAGTAAAAGGCGATTTTGGTTTCTACTTGTGCTAGCATGTGCCAATGCCGCTCAGCACGGAGTTT
AGCGAATTATGTGGATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MPPSFLIMQKRNLSIAVIFSVIVLASAGGLIYQRSKKEEHNFEANVQARASHESPAKPSRATAPLPPGNTPFRLVADNLK
ARALKGDAGAACRLALEYQKCNLAQQQISHADDVTSTSQDESDGVPEIALPLDKAKFYANLAHCEGTEEVNASEISRMWR
RSAENGNLAAMVNYAAGNAFSVASTLDTAEELIIYRKIAPQISRSAINRGSGLALLSLAAAYQPENQVGIRSYLSQAVGA
DIQQSLTLYKMAKMAATGSDQEVSRFIDDQIEKLDRRASALQRSQSDYEARERVSTIGKINLPSARDIAWLRIGSAPSID
LKDCED

Sequences:

>Translated_326_residues
MPPSFLIMQKRNLSIAVIFSVIVLASAGGLIYQRSKKEEHNFEANVQARASHESPAKPSRATAPLPPGNTPFRLVADNLK
ARALKGDAGAACRLALEYQKCNLAQQQISHADDVTSTSQDESDGVPEIALPLDKAKFYANLAHCEGTEEVNASEISRMWR
RSAENGNLAAMVNYAAGNAFSVASTLDTAEELIIYRKIAPQISRSAINRGSGLALLSLAAAYQPENQVGIRSYLSQAVGA
DIQQSLTLYKMAKMAATGSDQEVSRFIDDQIEKLDRRASALQRSQSDYEARERVSTIGKINLPSARDIAWLRIGSAPSID
LKDCED
>Mature_325_residues
PPSFLIMQKRNLSIAVIFSVIVLASAGGLIYQRSKKEEHNFEANVQARASHESPAKPSRATAPLPPGNTPFRLVADNLKA
RALKGDAGAACRLALEYQKCNLAQQQISHADDVTSTSQDESDGVPEIALPLDKAKFYANLAHCEGTEEVNASEISRMWRR
SAENGNLAAMVNYAAGNAFSVASTLDTAEELIIYRKIAPQISRSAINRGSGLALLSLAAAYQPENQVGIRSYLSQAVGAD
IQQSLTLYKMAKMAATGSDQEVSRFIDDQIEKLDRRASALQRSQSDYEARERVSTIGKINLPSARDIAWLRIGSAPSIDL
KDCED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35396; Mature: 35265

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSFLIMQKRNLSIAVIFSVIVLASAGGLIYQRSKKEEHNFEANVQARASHESPAKPSR
CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCC
ATAPLPPGNTPFRLVADNLKARALKGDAGAACRLALEYQKCNLAQQQISHADDVTSTSQD
CCCCCCCCCCCHHEECCCHHHHEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC
ESDGVPEIALPLDKAKFYANLAHCEGTEEVNASEISRMWRRSAENGNLAAMVNYAAGNAF
CCCCCCCEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCE
SVASTLDTAEELIIYRKIAPQISRSAINRGSGLALLSLAAAYQPENQVGIRSYLSQAVGA
EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
DIQQSLTLYKMAKMAATGSDQEVSRFIDDQIEKLDRRASALQRSQSDYEARERVSTIGKI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLPSARDIAWLRIGSAPSIDLKDCED
CCCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PPSFLIMQKRNLSIAVIFSVIVLASAGGLIYQRSKKEEHNFEANVQARASHESPAKPSR
CCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCC
ATAPLPPGNTPFRLVADNLKARALKGDAGAACRLALEYQKCNLAQQQISHADDVTSTSQD
CCCCCCCCCCCHHEECCCHHHHEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC
ESDGVPEIALPLDKAKFYANLAHCEGTEEVNASEISRMWRRSAENGNLAAMVNYAAGNAF
CCCCCCCEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCE
SVASTLDTAEELIIYRKIAPQISRSAINRGSGLALLSLAAAYQPENQVGIRSYLSQAVGA
EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCC
DIQQSLTLYKMAKMAATGSDQEVSRFIDDQIEKLDRRASALQRSQSDYEARERVSTIGKI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLPSARDIAWLRIGSAPSIDLKDCED
CCCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA