Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is fpr [H]
Identifier: 21242210
GI number: 21242210
Start: 1683723
End: 1684502
Strand: Reverse
Name: fpr [H]
Synonym: XAC1458
Alternate gene names: 21242210
Gene position: 1684502-1683723 (Counterclockwise)
Preceding gene: 21242211
Following gene: 21242208
Centisome position: 32.55
GC content: 61.28
Gene sequence:
>780_bases ATGTCTTCCGCTTTTGGCGCCGAAACGGTGCTTGAGGTCCGTCATTGGACCGATGCCTACTTCAGTTTCACCACGACCCG CGATGCCGGCTTCCGTTTCGAAAACGGGCAGTTCGTGATGATCGGGCTGGAAACCGAAACGCGTCCGTTGCTGCGTGCGT ATTCGATCGCCAGCGCCAATTGGGAAGAACATCTGGAGTTCTTCAGCATCAAGGTGCCGGACGGCCCGCTGACCTCGCGG CTGCAGCACATCCAGCCCGGCGACAAGGTGCTGGTCGGCAAGAAACCCACCGGCACGCTGCTGATCAGTGATCTGCACCC CGGGCGCAACCTGTATCTGTTGGGCACCGGTACCGGTCTGGCGCCGTGGCTGTCGATCATCAAGGACCCGGAAACCTACG AGCGTTTCGACAAGGTGATCCTCACCCAGGGCGTGCGGTTCGTGCAGGATCTGGCCTACCGCGATTACTTCGAACGCGAA TTGCCGCAGCACGAATTTCTCGGCGACCTGCTGCGCGAAAAATTGCTGTACTACCCGGCCGTCACGCGCGAAACCTTCGC CAACCAAGGCCGTTTGACCGAGCTGATGGCCGATGGACGCATGCAGCAGACGCTCGGGTTGCCGACACTGGATCCGGCCA ACGACCGTTTCATGATCTGTGGCAGCCCGCAGATGCTGGCCGACCTGCGCAGCCTGCTGGATAGCCGCGGTTTCCAGACC TCGCCGCGCATCGGCACGCCGGGGCATTACGTGTTCGAGCGCGCATTCGTCGAAAAGTGA
Upstream 100 bases:
>100_bases TCCCAATTCCCGATTCCCGATTCCCGCCCAAATGAGAGTTCATCTCATTTGGCCAGCTTGAGGTAGAATTGGCGCGTACT CCTCCCACGACACGACCGGT
Downstream 100 bases:
>100_bases CGCGCCGCGCATGCAAGACCCGTGCGGCGCGGCGTTTCGTCTGAAAAACCCGCTGTCGTAGGAGCGCCCCCGGGCGCAAC GAAGCGTTCCCGGTAACGCC
Product: ferredoxin-NADP reductase
Products: NA
Alternate protein names: FNR; Protein X [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSSAFGAETVLEVRHWTDAYFSFTTTRDAGFRFENGQFVMIGLETETRPLLRAYSIASANWEEHLEFFSIKVPDGPLTSR LQHIQPGDKVLVGKKPTGTLLISDLHPGRNLYLLGTGTGLAPWLSIIKDPETYERFDKVILTQGVRFVQDLAYRDYFERE LPQHEFLGDLLREKLLYYPAVTRETFANQGRLTELMADGRMQQTLGLPTLDPANDRFMICGSPQMLADLRSLLDSRGFQT SPRIGTPGHYVFERAFVEK
Sequences:
>Translated_259_residues MSSAFGAETVLEVRHWTDAYFSFTTTRDAGFRFENGQFVMIGLETETRPLLRAYSIASANWEEHLEFFSIKVPDGPLTSR LQHIQPGDKVLVGKKPTGTLLISDLHPGRNLYLLGTGTGLAPWLSIIKDPETYERFDKVILTQGVRFVQDLAYRDYFERE LPQHEFLGDLLREKLLYYPAVTRETFANQGRLTELMADGRMQQTLGLPTLDPANDRFMICGSPQMLADLRSLLDSRGFQT SPRIGTPGHYVFERAFVEK >Mature_258_residues SSAFGAETVLEVRHWTDAYFSFTTTRDAGFRFENGQFVMIGLETETRPLLRAYSIASANWEEHLEFFSIKVPDGPLTSRL QHIQPGDKVLVGKKPTGTLLISDLHPGRNLYLLGTGTGLAPWLSIIKDPETYERFDKVILTQGVRFVQDLAYRDYFEREL PQHEFLGDLLREKLLYYPAVTRETFANQGRLTELMADGRMQQTLGLPTLDPANDRFMICGSPQMLADLRSLLDSRGFQTS PRIGTPGHYVFERAFVEK
Specific function: Transports Electrons Between Flavodoxin Or Ferredoxin And NADPH. Involved In The Reductive Activation Of Cobalamin- Independent Methionine Synthase, Pyruvate Formate Lyase And Anaerobic Ribonucleotide Reductase. Also Protects Against Superoxide Radicals
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790359, Length=246, Percent_Identity=34.1463414634146, Blast_Score=137, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 29472; Mature: 29341
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAFGAETVLEVRHWTDAYFSFTTTRDAGFRFENGQFVMIGLETETRPLLRAYSIASAN CCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCCCEEEEEECCCCHHHHHHHHHHCCC WEEHLEFFSIKVPDGPLTSRLQHIQPGDKVLVGKKPTGTLLISDLHPGRNLYLLGTGTGL HHHCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCH APWLSIIKDPETYERFDKVILTQGVRFVQDLAYRDYFERELPQHEFLGDLLREKLLYYPA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC VTRETFANQGRLTELMADGRMQQTLGLPTLDPANDRFMICGSPQMLADLRSLLDSRGFQT HHHHHHHCCCHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC SPRIGTPGHYVFERAFVEK CCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SSAFGAETVLEVRHWTDAYFSFTTTRDAGFRFENGQFVMIGLETETRPLLRAYSIASAN CCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCCCEEEEEECCCCHHHHHHHHHHCCC WEEHLEFFSIKVPDGPLTSRLQHIQPGDKVLVGKKPTGTLLISDLHPGRNLYLLGTGTGL HHHCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCH APWLSIIKDPETYERFDKVILTQGVRFVQDLAYRDYFERELPQHEFLGDLLREKLLYYPA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC VTRETFANQGRLTELMADGRMQQTLGLPTLDPANDRFMICGSPQMLADLRSLLDSRGFQT HHHHHHHCCCHHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC SPRIGTPGHYVFERAFVEK CCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7673160; 8034707; 9865948 [H]