Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is fhuA [H]
Identifier: 21242188
GI number: 21242188
Start: 1654973
End: 1657111
Strand: Reverse
Name: fhuA [H]
Synonym: XAC1435
Alternate gene names: 21242188
Gene position: 1657111-1654973 (Counterclockwise)
Preceding gene: 21242189
Following gene: 21242187
Centisome position: 32.02
GC content: 63.3
Gene sequence:
>2139_bases ATGCGCCCCACGCTTCTTGTCACCGCGCTCGCCGCCGCGCTCGCTCTGCACACCCTGTCCGCCTTCGCTCAACACACCAC CACGCCAGCCGTGACCGAGCTGGATGGCGTGGATGTCATCGGCCGTGCGCAGACGCTCTACAAGTCCGAAGACGCCGCTG TTGCCACGCGCACCGATACCCCGCTGGCGCTGGTGCCGCAATCGGTGCAGGTGCTGCCGCGCGAGTTGATCGACGACCAG GCCGCGCGGCAGATCACCGATCTGTATCGCAGCATCAGCGGCATCAGTTTCTTCAGCTATGCCGGTGTGACCTTGCGCGG TTTCCGCCAGGAAAACGTGCTGTACGACGGTCTGCGCGGCGACCCGTATGCCGGGTTCTCGGTGCCGCAGCTGTTCAACA TCGAACGCGTGGAAGTGCTCAAGGGTCCAGCCGGAGCGCTGTACGGCGGTGGCGAACCCGGGGGTGTGATCAACTATGTC ACGCGCAAGCCCGGTCATCAGGCGGCGCGCCGCATCGAACTGCAGCTGGGCAATCAATCCTTCGGTGCAGCCTCCTTCGA GGCCACCGGCCCTGCGCGCGAAGATGGCCGCATCCGTTACCGCATCGGCGCCTATGTCGATGGCGAAGACGGGTTTCGTT GGAATACCGACAGCCAGAGCAAGATCGGCGATGCGTCGGTGGCCTTCGATCTGGGCGATACCGGCGAGCTCACCCTGCAA TATACCGACATCACCCAGAACCTGGGCGGCAACCGACTGCGCGGCGTGCCGGTCGATAACGACGGCAACTTCCTCACCGA CCGGCGCTGGAACCACAACGAACCTACCGATTTCCTGGACATGCGTGCCAAGGTGGCGCTTGCGCAGTATCGGTTTGCAC CGTCCAGCGCGTGGGAGGTGGACATGGCGCTGCGTTGGTTCAAGAACCGAGAGCATCAGATCTATCACGAGCCGATGGGT CTGATCGACCGCGATCGCGACGGCACCGCCGAATGGATGACCCGGCAGCTGCGCAATCAATACCGCGACAACGATGCGAT CTCCAGCAACGTCAACGCGATATTCCGCACCAGTACCGGGGCGATCGAGCACAAGCTGCTGATGGGCGCGGACTACTACC GGCTGGACGCGGATTTCCGCGCGCAAACCGCCAACACCGCAGACACCGGACGCGTGCGCGGCCCGGTGCCTGGCATCGAT TTGTTCAACCCGGTATACGGCCGCAGCGGCTTCTACGATTACGGTTTGGATGCCCTGCCCTGGCGCGCCACCAGCACGCG CAGTCAACGCTACGGCGCATATCTGCAGGACGAACTCACGCTGACGCCGCGCTGGTATGCAATGGCGGGGCTACGCTGGG ACGGCTTCAAGGACGACAACCTGCTGGGTGGTTCGCGCGTCACCGGCAACGATGTCAGTTGGCGCGTCGGCAGCACCGTG GTGTTACGCGATGGCATCAATGCCTACGCAAGCTATGCCAGCGGTTTCCTGCCGCAGGACGCGGCCAATCAGGACAGCAG CGTGGGCGGACCGTTCGCTCCGGAACGCAGTACGCAATGGGAAATGGGCCTGAAGACTGCGCTCAACGATGGCGGACTCA CCCTCAACACGGCGTTGTATCGCATCGAGCGCAGCAACATCGTGCAGGCGAACGGACGCGTCGTCGAGGGTGTCAATCAG CTCTCTGCGCTTGGCTTGGTGCGCAGCGAAGGACTCGAAGTCGACCTGCTGGCCGACCTGACCGAGCGCTGGGTGCTCAA TCTCACGTATGCCTACAACGATGCACGTGTGCTCGATGCAGGCACCAATGGCATCACCAATGCCTCTGGCGATCGCTTCG CCAATGCACCGCGCAACACCTTCGGCCTGTGGACGCGCTACGACCTGCCGATGTGGCGCTCGGCGATCGCCTTCGGTGCC GACTACGTGGGCGAACGCGTCAGCCTGGATGGCCAACGCGTCAAACCGTATGCCATTTACGACATCAGCTGGCAGACGCA GTGGGACGCGTGGAAACTGCAGATCAACGTCAAGAACCTGTTCGACAAGGTCTATGCGGCGAGCGGGTTCAATACGCGCG CCGGACACTTCCCCGGCGAGCCGCGTCGCATTTACGCGCAGCTGGCTTACAGCTTCTGA
Upstream 100 bases:
>100_bases ATCCTCCACCAAGCATCGCGCCCGGCACCTCGGCGATCTCCGTGATCAAGCAACCACATCATGCTAAGATGCATTTGATA ACCATTCCCATTAGTGACCA
Downstream 100 bases:
>100_bases CGAGCGCGCGGCGAATATGTGGCGCGCCACCAGCCAGCTGCGATGGCAACGCAAACAGCGCATCGTGCCTGCGGTTGCCA CCCGCTCAAATCACGTGTTT
Product: iron receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MRPTLLVTALAAALALHTLSAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDTPLALVPQSVQVLPRELIDDQ AARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRGDPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYV TRKPGHQAARRIELQLGNQSFGAASFEATGPAREDGRIRYRIGAYVDGEDGFRWNTDSQSKIGDASVAFDLGDTGELTLQ YTDITQNLGGNRLRGVPVDNDGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEVDMALRWFKNREHQIYHEPMG LIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTGAIEHKLLMGADYYRLDADFRAQTANTADTGRVRGPVPGID LFNPVYGRSGFYDYGLDALPWRATSTRSQRYGAYLQDELTLTPRWYAMAGLRWDGFKDDNLLGGSRVTGNDVSWRVGSTV VLRDGINAYASYASGFLPQDAANQDSSVGGPFAPERSTQWEMGLKTALNDGGLTLNTALYRIERSNIVQANGRVVEGVNQ LSALGLVRSEGLEVDLLADLTERWVLNLTYAYNDARVLDAGTNGITNASGDRFANAPRNTFGLWTRYDLPMWRSAIAFGA DYVGERVSLDGQRVKPYAIYDISWQTQWDAWKLQINVKNLFDKVYAASGFNTRAGHFPGEPRRIYAQLAYSF
Sequences:
>Translated_712_residues MRPTLLVTALAAALALHTLSAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDTPLALVPQSVQVLPRELIDDQ AARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRGDPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYV TRKPGHQAARRIELQLGNQSFGAASFEATGPAREDGRIRYRIGAYVDGEDGFRWNTDSQSKIGDASVAFDLGDTGELTLQ YTDITQNLGGNRLRGVPVDNDGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEVDMALRWFKNREHQIYHEPMG LIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTGAIEHKLLMGADYYRLDADFRAQTANTADTGRVRGPVPGID LFNPVYGRSGFYDYGLDALPWRATSTRSQRYGAYLQDELTLTPRWYAMAGLRWDGFKDDNLLGGSRVTGNDVSWRVGSTV VLRDGINAYASYASGFLPQDAANQDSSVGGPFAPERSTQWEMGLKTALNDGGLTLNTALYRIERSNIVQANGRVVEGVNQ LSALGLVRSEGLEVDLLADLTERWVLNLTYAYNDARVLDAGTNGITNASGDRFANAPRNTFGLWTRYDLPMWRSAIAFGA DYVGERVSLDGQRVKPYAIYDISWQTQWDAWKLQINVKNLFDKVYAASGFNTRAGHFPGEPRRIYAQLAYSF >Mature_712_residues MRPTLLVTALAAALALHTLSAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDTPLALVPQSVQVLPRELIDDQ AARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRGDPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYV TRKPGHQAARRIELQLGNQSFGAASFEATGPAREDGRIRYRIGAYVDGEDGFRWNTDSQSKIGDASVAFDLGDTGELTLQ YTDITQNLGGNRLRGVPVDNDGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEVDMALRWFKNREHQIYHEPMG LIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTGAIEHKLLMGADYYRLDADFRAQTANTADTGRVRGPVPGID LFNPVYGRSGFYDYGLDALPWRATSTRSQRYGAYLQDELTLTPRWYAMAGLRWDGFKDDNLLGGSRVTGNDVSWRVGSTV VLRDGINAYASYASGFLPQDAANQDSSVGGPFAPERSTQWEMGLKTALNDGGLTLNTALYRIERSNIVQANGRVVEGVNQ LSALGLVRSEGLEVDLLADLTERWVLNLTYAYNDARVLDAGTNGITNASGDRFANAPRNTFGLWTRYDLPMWRSAIAFGA DYVGERVSLDGQRVKPYAIYDISWQTQWDAWKLQINVKNLFDKVYAASGFNTRAGHFPGEPRRIYAQLAYSF
Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=794, Percent_Identity=23.2997481108312, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1787344, Length=771, Percent_Identity=24.3839169909209, Blast_Score=118, Evalue=2e-27, Organism=Escherichia coli, GI1787024, Length=711, Percent_Identity=23.0661040787623, Blast_Score=112, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78990; Mature: 78990
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTLLVTALAAALALHTLSAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCEEEEECCC PLALVPQSVQVLPRELIDDQAARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRG CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHCCCEEEECCCCCCCEEECCCC DPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYVTRKPGHQAARRIELQLGNQS CCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHEEEEEECCCC FGAASFEATGPAREDGRIRYRIGAYVDGEDGFRWNTDSQSKIGDASVAFDLGDTGELTLQ CCCCEECCCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCEEEEECCCCCEEEEE YTDITQNLGGNRLRGVPVDNDGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEV EEEHHHCCCCCEEECEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH DMALRWFKNREHQIYHEPMGLIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTG HHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC AIEHKLLMGADYYRLDADFRAQTANTADTGRVRGPVPGIDLFNPVYGRSGFYDYGLDALP CHHEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WRATSTRSQRYGAYLQDELTLTPRWYAMAGLRWDGFKDDNLLGGSRVTGNDVSWRVGSTV CCCCCCCHHHCCCEEECCEEECCCHHEEECCEECCCCCCCCCCCCEECCCCCEEECCCEE VLRDGINAYASYASGFLPQDAANQDSSVGGPFAPERSTQWEMGLKTALNDGGLTLNTALY EEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEHEEE RIERSNIVQANGRVVEGVNQLSALGLVRSEGLEVDLLADLTERWVLNLTYAYNDARVLDA EEECCCEEECCCEEEHHHHHHHHHHHHHHCCCCEEHHHHCCCCEEEEEEEEECCCEEEEC GTNGITNASGDRFANAPRNTFGLWTRYDLPMWRSAIAFGADYVGERVSLDGQRVKPYAIY CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCHHHCCCEECCCCCCCCCEEEE DISWQTQWDAWKLQINVKNLFDKVYAASGFNTRAGHFPGEPRRIYAQLAYSF EECEEECCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEHHCC >Mature Secondary Structure MRPTLLVTALAAALALHTLSAFAQHTTTPAVTELDGVDVIGRAQTLYKSEDAAVATRTDT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCEEEEECCC PLALVPQSVQVLPRELIDDQAARQITDLYRSISGISFFSYAGVTLRGFRQENVLYDGLRG CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHCCCEEEECCCCCCCEEECCCC DPYAGFSVPQLFNIERVEVLKGPAGALYGGGEPGGVINYVTRKPGHQAARRIELQLGNQS CCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHEEEEEECCCC FGAASFEATGPAREDGRIRYRIGAYVDGEDGFRWNTDSQSKIGDASVAFDLGDTGELTLQ CCCCEECCCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCEEEEECCCCCEEEEE YTDITQNLGGNRLRGVPVDNDGNFLTDRRWNHNEPTDFLDMRAKVALAQYRFAPSSAWEV EEEHHHCCCCCEEECEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH DMALRWFKNREHQIYHEPMGLIDRDRDGTAEWMTRQLRNQYRDNDAISSNVNAIFRTSTG HHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC AIEHKLLMGADYYRLDADFRAQTANTADTGRVRGPVPGIDLFNPVYGRSGFYDYGLDALP CHHEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WRATSTRSQRYGAYLQDELTLTPRWYAMAGLRWDGFKDDNLLGGSRVTGNDVSWRVGSTV CCCCCCCHHHCCCEEECCEEECCCHHEEECCEECCCCCCCCCCCCEECCCCCEEECCCEE VLRDGINAYASYASGFLPQDAANQDSSVGGPFAPERSTQWEMGLKTALNDGGLTLNTALY EEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEHEEE RIERSNIVQANGRVVEGVNQLSALGLVRSEGLEVDLLADLTERWVLNLTYAYNDARVLDA EEECCCEEECCCEEEHHHHHHHHHHHHHHCCCCEEHHHHCCCCEEEEEEEEECCCEEEEC GTNGITNASGDRFANAPRNTFGLWTRYDLPMWRSAIAFGADYVGERVSLDGQRVKPYAIY CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCHHHCCCEECCCCCCCCCEEEE DISWQTQWDAWKLQINVKNLFDKVYAASGFNTRAGHFPGEPRRIYAQLAYSF EECEEECCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258; 7642488 [H]