Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242187
Identifier: 21242187
GI number: 21242187
Start: 1653476
End: 1654522
Strand: Reverse
Name: 21242187
Synonym: XAC1434
Alternate gene names: NA
Gene position: 1654522-1653476 (Counterclockwise)
Preceding gene: 21242188
Following gene: 21242180
Centisome position: 31.97
GC content: 61.32
Gene sequence:
>1047_bases TTGCTTGCCCGCTCCGTTTCCGCCCTGTTGCCACTGATGTTTGCCACTGCCTGCTCGGCCGCGCCGCCAGCCAAATCCGG CCCGCCGGATGCGCCAGTGGCTGCATGCACCGCCAAGGTACGTCCTGGCCAGGACCTGCAGAAAGCCATCGACAAACTGC CGCAAAGCGACAAGCCCACGGTACTTTGCCTGGAGAAAGGCGAGTTCCCGCTCAATGGCTTGGTATCGATCCATCGCGGC AACTTTACCCTGCGCGGCCAGGGCCCCAGCACCATCGTGCGCATGGCCGACGGCGTGCAGCAGCCGGTGCTGGTGGTCGG CGATTACGAAAACCAGCAGCCCACCGGTGTGATCCGCAACGTCAGCATCGAAGACATGCAGATCGTAGCGAGCACAGGCG ATAAGGAGTTCATGCCCGAGCGCCCCTACCTGAGCAACAGCGCGGTGGTGGTGCGGTCCGGACAAGGCATCCGGCTTGCA GGCCTGCAGGTCAACAAGTGCCGCAGCGCGTGCCTGCTGAGCGAGTACGACACCCGCGAGATCACCATCGAAAACAACGA TGTGTCGGGCGCAATCTGGGACGGCGTCTCGTTCAACCGCACCGCCAAGGTCACGATGGTCAACAACTATATCCACGACA ACGTGGCCGCCGGCCTGACCACCGAACACCTGGAAGACAGCGAGATCCGCAACAACCGTTTCGAGCGCAACGGCAGCCAG GGCATCTATCTCTCCGATGCGGGGCGCAATCGCTTCAGCAACAATCAATTCGATGGCAACAAGGTGGCCGGCGTGTTTCT GGCCTGCGCGATTCGTTATCGCACACCGGAAATTTTGTGCTGGGACAACAGCATGAGCCAGGACAACGTCTTCGAGAACA ACCGTTTCGCCAACACGCCGTTTACCTACACCATCGGCGTGGACCGCGCGGCCAACTGCACGTCGGCCGACTTCAAGCCG AACCTTTGGCGCAATAACCAGGCCGACATGGCGGGTGTGGATATCGATCCGCAGCGCTATGGGTACTGCGTGCGGCACGA GCAATAA
Upstream 100 bases:
>100_bases GAACTTAACGTCCGGTGGGACACACTAGAGTCCGTCGCGAATGTGGAGTCTTGCTCCGCACATCGCCCTCCTCCCCCCAC TGACCGGAATCCGCATGCCT
Downstream 100 bases:
>100_bases GACGCGCCAGTCAACGCAGCGGCCGGCCGTGCAGCGATGCACGCCGGCCGCTGCAGTGACTGCAGCCTTTACGAAGCCAG CGCCTGCGCGTGCACCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLARSVSALLPLMFATACSAAPPAKSGPPDAPVAACTAKVRPGQDLQKAIDKLPQSDKPTVLCLEKGEFPLNGLVSIHRG NFTLRGQGPSTIVRMADGVQQPVLVVGDYENQQPTGVIRNVSIEDMQIVASTGDKEFMPERPYLSNSAVVVRSGQGIRLA GLQVNKCRSACLLSEYDTREITIENNDVSGAIWDGVSFNRTAKVTMVNNYIHDNVAAGLTTEHLEDSEIRNNRFERNGSQ GIYLSDAGRNRFSNNQFDGNKVAGVFLACAIRYRTPEILCWDNSMSQDNVFENNRFANTPFTYTIGVDRAANCTSADFKP NLWRNNQADMAGVDIDPQRYGYCVRHEQ
Sequences:
>Translated_348_residues MLARSVSALLPLMFATACSAAPPAKSGPPDAPVAACTAKVRPGQDLQKAIDKLPQSDKPTVLCLEKGEFPLNGLVSIHRG NFTLRGQGPSTIVRMADGVQQPVLVVGDYENQQPTGVIRNVSIEDMQIVASTGDKEFMPERPYLSNSAVVVRSGQGIRLA GLQVNKCRSACLLSEYDTREITIENNDVSGAIWDGVSFNRTAKVTMVNNYIHDNVAAGLTTEHLEDSEIRNNRFERNGSQ GIYLSDAGRNRFSNNQFDGNKVAGVFLACAIRYRTPEILCWDNSMSQDNVFENNRFANTPFTYTIGVDRAANCTSADFKP NLWRNNQADMAGVDIDPQRYGYCVRHEQ >Mature_348_residues MLARSVSALLPLMFATACSAAPPAKSGPPDAPVAACTAKVRPGQDLQKAIDKLPQSDKPTVLCLEKGEFPLNGLVSIHRG NFTLRGQGPSTIVRMADGVQQPVLVVGDYENQQPTGVIRNVSIEDMQIVASTGDKEFMPERPYLSNSAVVVRSGQGIRLA GLQVNKCRSACLLSEYDTREITIENNDVSGAIWDGVSFNRTAKVTMVNNYIHDNVAAGLTTEHLEDSEIRNNRFERNGSQ GIYLSDAGRNRFSNNQFDGNKVAGVFLACAIRYRTPEILCWDNSMSQDNVFENNRFANTPFTYTIGVDRAANCTSADFKP NLWRNNQADMAGVDIDPQRYGYCVRHEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38214; Mature: 38214
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARSVSALLPLMFATACSAAPPAKSGPPDAPVAACTAKVRPGQDLQKAIDKLPQSDKPT CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHCCCCCCCE VLCLEKGEFPLNGLVSIHRGNFTLRGQGPSTIVRMADGVQQPVLVVGDYENQQPTGVIRN EEEEECCCCCCCCEEEEECCCEEEECCCCHHHHHHHCCCCCCEEEEECCCCCCCCCEEEE VSIEDMQIVASTGDKEFMPERPYLSNSAVVVRSGQGIRLAGLQVNKCRSACLLSEYDTRE CCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEECEEHHHHHHHHHHCCCCCEE ITIENNDVSGAIWDGVSFNRTAKVTMVNNYIHDNVAAGLTTEHLEDSEIRNNRFERNGSQ EEEECCCCCEEEECCCCCCCEEEEEEEECHHHCHHHCCCCHHCCCCHHHHHCHHHCCCCC GIYLSDAGRNRFSNNQFDGNKVAGVFLACAIRYRTPEILCWDNSMSQDNVFENNRFANTP EEEEECCCCCCCCCCCCCCCHHHHEEEEEHHEECCCEEEEECCCCCCCCCCCCCCCCCCC FTYTIGVDRAANCTSADFKPNLWRNNQADMAGVDIDPQRYGYCVRHEQ EEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHCCEEEECCC >Mature Secondary Structure MLARSVSALLPLMFATACSAAPPAKSGPPDAPVAACTAKVRPGQDLQKAIDKLPQSDKPT CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHCCCCCCCE VLCLEKGEFPLNGLVSIHRGNFTLRGQGPSTIVRMADGVQQPVLVVGDYENQQPTGVIRN EEEEECCCCCCCCEEEEECCCEEEECCCCHHHHHHHCCCCCCEEEEECCCCCCCCCEEEE VSIEDMQIVASTGDKEFMPERPYLSNSAVVVRSGQGIRLAGLQVNKCRSACLLSEYDTRE CCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEECEEHHHHHHHHHHCCCCCEE ITIENNDVSGAIWDGVSFNRTAKVTMVNNYIHDNVAAGLTTEHLEDSEIRNNRFERNGSQ EEEECCCCCEEEECCCCCCCEEEEEEEECHHHCHHHCCCCHHCCCCHHHHHCHHHCCCCC GIYLSDAGRNRFSNNQFDGNKVAGVFLACAIRYRTPEILCWDNSMSQDNVFENNRFANTP EEEEECCCCCCCCCCCCCCCHHHHEEEEEHHEECCCEEEEECCCCCCCCCCCCCCCCCCC FTYTIGVDRAANCTSADFKPNLWRNNQADMAGVDIDPQRYGYCVRHEQ EEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA