Click here to switch to the map view.

The map label for this gene is 21242176

Identifier: 21242176

GI number: 21242176

Start: 1638752

End: 1639471

Strand: Reverse

Name: 21242176

Synonym: XAC1423

Alternate gene names: NA

Gene position: 1639471-1638752 (Counterclockwise)

Preceding gene: 21242177

Following gene: 21242175

Centisome position: 31.68

GC content: 68.75

Gene sequence:

>720_bases
ATGGCCACTGCCCGTTACCTTCGCGATCTGTTGGCCCTGGTCCTGGGCGGTATGGCAGGAAGCGGCGCCGCCAGTGCTGC
CGAGATCGCCATCGCGCCGACCACCGCGCATATCCCGGCCGACAGCGATCAGGTAACGGTCTGGCTTTACAACCAGGCCG
CCCAGCCATGGCGTGCCGACGCCAAGCTCTACCGCTGGCGCCAGGACGGTGAGCGCGAACTCCTCGAGCCGGCCACCGGC
GCCACCGTCAGCCCGGCGCATTTCGAAATACCATCGCAGGGCCGGCAACTGCTGCGCGTGATCCGCCTCGGCCCCAGCCC
CACGCAGGCCGAAGACAGCTACCGGCTCGTCGTGACCCAGCACGCGATCGGCAACGAGACCGACCTGCTGCGTTATTCTA
CCCCCGTGTTTGCACAGCCCAGCCAGGCCCGCGCAGCGCAACCGGCGCTGCATGCCAGCCTGGCCGGGCACGGCAGCCAG
CGCGCGTTGCGCATCTACAATTCCGGCCCCAGCCATGCGCGCCTGGCCGACCTGGCCTATATCGATGCCGGCGGTACCCG
CCGCAACATCCGCAACGACCTGGCCGGCTACGTCCTCCCCGGCCAGACCCGCCAATGGACCCTGCCCGCCAACCTGCCCG
CAGGCAGCGGCCGCTTCGTGGCGCGTATCAACAGCGATATCGAAAGCACGCTGGCCTTGGAGCCGGGAGTGGGGAATTGA

Upstream 100 bases:

>100_bases
ATGAGGCACCCGCTGTCACCAGCACCGGCCAGGACGCCAGCGCACTTGCCGGGCCGATGCCCGCAGGCAGCGCGCGCATC
ACCACCATCGCGTTCTGAGC

Downstream 100 bases:

>100_bases
GAATTGGGAATGGGTCAAGCGGATTGCGCTAGCTGATCGCGGGCTCGTGAACGCCCAAGCGCACCAGGCTCTGCGATTCC
CGATTCCCGATTCCCGATTC

Product: pili assembly chaperone

Products: NA

Alternate protein names: P Pilus Assembly Protein Chaperone PapD-Like Protein; P Pilus Assembly Protein Chaperone PapD-Like; Type 1 Pili Usher Pathway Chaperone CsuC; Exported Fimbriae-Related Chaperone; Pilus Assembly Protein; Pili Assembly Chaperone Transmembrane Protein; Putataive Fimbrial Chaperone Protein; Pili Assembly Chaperone Transmembrane Protein Papd-Like; Fimbriae Chaperone; Fimbrial Chaperone Protein; P Pilus Assembly Protein Chaperone PapD; Pili Assembly Chaperone Protein

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MATARYLRDLLALVLGGMAGSGAASAAEIAIAPTTAHIPADSDQVTVWLYNQAAQPWRADAKLYRWRQDGERELLEPATG
ATVSPAHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVVTQHAIGNETDLLRYSTPVFAQPSQARAAQPALHASLAGHGSQ
RALRIYNSGPSHARLADLAYIDAGGTRRNIRNDLAGYVLPGQTRQWTLPANLPAGSGRFVARINSDIESTLALEPGVGN

Sequences:

>Translated_239_residues
MATARYLRDLLALVLGGMAGSGAASAAEIAIAPTTAHIPADSDQVTVWLYNQAAQPWRADAKLYRWRQDGERELLEPATG
ATVSPAHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVVTQHAIGNETDLLRYSTPVFAQPSQARAAQPALHASLAGHGSQ
RALRIYNSGPSHARLADLAYIDAGGTRRNIRNDLAGYVLPGQTRQWTLPANLPAGSGRFVARINSDIESTLALEPGVGN
>Mature_238_residues
ATARYLRDLLALVLGGMAGSGAASAAEIAIAPTTAHIPADSDQVTVWLYNQAAQPWRADAKLYRWRQDGERELLEPATGA
TVSPAHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVVTQHAIGNETDLLRYSTPVFAQPSQARAAQPALHASLAGHGSQR
ALRIYNSGPSHARLADLAYIDAGGTRRNIRNDLAGYVLPGQTRQWTLPANLPAGSGRFVARINSDIESTLALEPGVGN

Specific function: Unknown

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25620; Mature: 25489

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATARYLRDLLALVLGGMAGSGAASAAEIAIAPTTAHIPADSDQVTVWLYNQAAQPWRAD
CCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCCEEEEEEECCCCCCCCCC
AKLYRWRQDGERELLEPATGATVSPAHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVVTQ
HHHHHHHCCCCHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
HAIGNETDLLRYSTPVFAQPSQARAAQPALHASLAGHGSQRALRIYNSGPSHARLADLAY
CCCCCCCCEEEECCCCCCCCCHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEE
IDAGGTRRNIRNDLAGYVLPGQTRQWTLPANLPAGSGRFVARINSDIESTLALEPGVGN
EECCCCHHHHHHHHCCEEECCCCEEEEECCCCCCCCCEEEEEECCCCHHEEEECCCCCC
>Mature Secondary Structure 
ATARYLRDLLALVLGGMAGSGAASAAEIAIAPTTAHIPADSDQVTVWLYNQAAQPWRAD
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCCEEEEEEECCCCCCCCCC
AKLYRWRQDGERELLEPATGATVSPAHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVVTQ
HHHHHHHCCCCHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
HAIGNETDLLRYSTPVFAQPSQARAAQPALHASLAGHGSQRALRIYNSGPSHARLADLAY
CCCCCCCCEEEECCCCCCCCCHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEE
IDAGGTRRNIRNDLAGYVLPGQTRQWTLPANLPAGSGRFVARINSDIESTLALEPGVGN
EECCCCHHHHHHHHCCEEECCCCEEEEECCCCCCCCCEEEEEECCCCHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA