Click here to switch to the map view.

The map label for this gene is ypdP [H]

Identifier: 21242147

GI number: 21242147

Start: 1605537

End: 1606304

Strand: Reverse

Name: ypdP [H]

Synonym: XAC1394

Alternate gene names: 21242147

Gene position: 1606304-1605537 (Counterclockwise)

Preceding gene: 21242148

Following gene: 77748583

Centisome position: 31.04

GC content: 63.67

Gene sequence:

>768_bases
GTGCGCACCCTCGATGATCGTGCGGTCCGCCTGTTCATTGCACTGGCGGCCTTCTTCTGCGTCAACGCGGCGCTGGCCGA
GTTCATTGGCGTCAAGATCTTCGCGCTGGAAGACACGCTCGGCATTGCGCCACTGAACTGGAATCTGTTCGGCCAGCGCG
GCTCGCTCAGCTTCACCGCCGGCACCTTGCTGTGGCCGATCGTGTTCATCATGACCGACACCATCAACGAGTTCTTCGGC
AGCCGCGGGGTGCGTTTCATCTCGTGGGTGGCGGTGGTGCTGATCGGCTACGGCTTCGTGTTCGCATTCGCGGCCATCGC
GCTGGCGCCGGCCGGCTGGTGGGTCACTGCGGCGCAAAACCAGGGCGTGCCCGATTACCAGGCGGCATTTGCGGCAGTGT
TCGGGCAAGGGCTGTGGACCATCGGCGGCTCGCTGGTGGCATTCCTGTTCAGCCAGTTGATCGATGTCTCGGTGTTCCAC
CGCATCCGCCGCGTCACTGGCGAAAAACACGTGTGGCTGCGCGCCACCGGCTCCACTGCGGTCTCGCAGGTGGTGGACAG
CTTCGTGGTGATCTATATCGCCTTCGTGCTCGGCCCGCAGCATTGGTCGATCGACCAGTTCCTGGCAGTGAGCACGCTCA
ACTACATCTACAAGATGGGCTTTGCGGTCTTGCTGATCCCGCTGCTGTATCTGGCACGCCGCGGCATTACTGCGTACCTG
GGCGCCGAGCGTGCCGAGCAGCTGCGCGAAGAAGCCGCTGCCGCCTGA

Upstream 100 bases:

>100_bases
AGCGTGGATCAGGCGATGAGCTTCATCATTTCCGGTGGCGCCGTGGCGCCCGAATCGGTTCCCTTCACCCGAACTGCGGA
TCGCTGACACCATGAACCAT

Downstream 100 bases:

>100_bases
GCCGGGCTGTCTCCCAGCCAGGGTCGTCGCGCCGCAATGGGGTGCGGCGGCAACACCTTGCCAACAGTGGTCCGCATCGC
GGCGCCGCGAGCCAGCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRTLDDRAVRLFIALAAFFCVNAALAEFIGVKIFALEDTLGIAPLNWNLFGQRGSLSFTAGTLLWPIVFIMTDTINEFFG
SRGVRFISWVAVVLIGYGFVFAFAAIALAPAGWWVTAAQNQGVPDYQAAFAAVFGQGLWTIGGSLVAFLFSQLIDVSVFH
RIRRVTGEKHVWLRATGSTAVSQVVDSFVVIYIAFVLGPQHWSIDQFLAVSTLNYIYKMGFAVLLIPLLYLARRGITAYL
GAERAEQLREEAAAA

Sequences:

>Translated_255_residues
MRTLDDRAVRLFIALAAFFCVNAALAEFIGVKIFALEDTLGIAPLNWNLFGQRGSLSFTAGTLLWPIVFIMTDTINEFFG
SRGVRFISWVAVVLIGYGFVFAFAAIALAPAGWWVTAAQNQGVPDYQAAFAAVFGQGLWTIGGSLVAFLFSQLIDVSVFH
RIRRVTGEKHVWLRATGSTAVSQVVDSFVVIYIAFVLGPQHWSIDQFLAVSTLNYIYKMGFAVLLIPLLYLARRGITAYL
GAERAEQLREEAAAA
>Mature_255_residues
MRTLDDRAVRLFIALAAFFCVNAALAEFIGVKIFALEDTLGIAPLNWNLFGQRGSLSFTAGTLLWPIVFIMTDTINEFFG
SRGVRFISWVAVVLIGYGFVFAFAAIALAPAGWWVTAAQNQGVPDYQAAFAAVFGQGLWTIGGSLVAFLFSQLIDVSVFH
RIRRVTGEKHVWLRATGSTAVSQVVDSFVVIYIAFVLGPQHWSIDQFLAVSTLNYIYKMGFAVLLIPLLYLARRGITAYL
GAERAEQLREEAAAA

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 28001; Mature: 28001

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLDDRAVRLFIALAAFFCVNAALAEFIGVKIFALEDTLGIAPLNWNLFGQRGSLSFTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEECCCCCCCCHH
GTLLWPIVFIMTDTINEFFGSRGVRFISWVAVVLIGYGFVFAFAAIALAPAGWWVTAAQN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
QGVPDYQAAFAAVFGQGLWTIGGSLVAFLFSQLIDVSVFHRIRRVTGEKHVWLRATGSTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
VSQVVDSFVVIYIAFVLGPQHWSIDQFLAVSTLNYIYKMGFAVLLIPLLYLARRGITAYL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GAERAEQLREEAAAA
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTLDDRAVRLFIALAAFFCVNAALAEFIGVKIFALEDTLGIAPLNWNLFGQRGSLSFTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCEEECCCCCCCCHH
GTLLWPIVFIMTDTINEFFGSRGVRFISWVAVVLIGYGFVFAFAAIALAPAGWWVTAAQN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
QGVPDYQAAFAAVFGQGLWTIGGSLVAFLFSQLIDVSVFHRIRRVTGEKHVWLRATGSTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH
VSQVVDSFVVIYIAFVLGPQHWSIDQFLAVSTLNYIYKMGFAVLLIPLLYLARRGITAYL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GAERAEQLREEAAAA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]