Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241999
Identifier: 21241999
GI number: 21241999
Start: 1421291
End: 1421719
Strand: Direct
Name: 21241999
Synonym: XAC1245
Alternate gene names: NA
Gene position: 1421291-1421719 (Clockwise)
Preceding gene: 21241994
Following gene: 21242002
Centisome position: 27.46
GC content: 64.8
Gene sequence:
>429_bases GTGTTGCTCGCGGCGTTTGGGCTGGCGGCAAGTGCGGGCGTGCCGGCGCAATGCCTGCCCGAATTCAAGAATGGCTGGAT CCGCATTCCGCCGCCCGGTGGCATGGGCATGGCGGCCGGGTTCGGGCAATTTCATAACGGCTGTGCGCAGCCGCTGACGA TCACTGCTGCCAACAGCAGCGTATTTGCCGATGTCTCCTTGCACGAAACCACACAGGTCAATGGCGTCAGCCGCATGCGT GCGGTGCCCGAACTGGCATTGCCGGCCGGCAAATCTGTGCCGTTGGCGCCGGGCGGCCTGCACCTGATGTTGATGGACGC CAGTGCGCCGTTGCAGGAAGGCGCGCAGGTGCCGGTGAGCTTTACCCTGCAGGACGGTCGCCAAATCAAGGCTACCTTGG AAGCACGCAAGCGCGCGCCCGGGTCTTGA
Upstream 100 bases:
>100_bases CGAAGACGGCCATGGTCTAAGATCTGAATGCTCATTCGGGGCTCCTGGAGGTCGGGTCATGATAGACGGCAGTCGAAGCA GGCGGGTTAGGTATGCCGGC
Downstream 100 bases:
>100_bases GTGTTTGATGGCTGTTGCGCACTTGCGCCAGCATTGAAATGAAAGCGGCGGCTCCACACGGAGCCGCCGCCGATCTTTCG CGTTGCTGCAACCTCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MLLAAFGLAASAGVPAQCLPEFKNGWIRIPPPGGMGMAAGFGQFHNGCAQPLTITAANSSVFADVSLHETTQVNGVSRMR AVPELALPAGKSVPLAPGGLHLMLMDASAPLQEGAQVPVSFTLQDGRQIKATLEARKRAPGS
Sequences:
>Translated_142_residues MLLAAFGLAASAGVPAQCLPEFKNGWIRIPPPGGMGMAAGFGQFHNGCAQPLTITAANSSVFADVSLHETTQVNGVSRMR AVPELALPAGKSVPLAPGGLHLMLMDASAPLQEGAQVPVSFTLQDGRQIKATLEARKRAPGS >Mature_142_residues MLLAAFGLAASAGVPAQCLPEFKNGWIRIPPPGGMGMAAGFGQFHNGCAQPLTITAANSSVFADVSLHETTQVNGVSRMR AVPELALPAGKSVPLAPGGLHLMLMDASAPLQEGAQVPVSFTLQDGRQIKATLEARKRAPGS
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 14586; Mature: 14586
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAAFGLAASAGVPAQCLPEFKNGWIRIPPPGGMGMAAGFGQFHNGCAQPLTITAANSS CEEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECCCC VFADVSLHETTQVNGVSRMRAVPELALPAGKSVPLAPGGLHLMLMDASAPLQEGAQVPVS EEEEEEECCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE FTLQDGRQIKATLEARKRAPGS EEECCCCEEHHHHHHHHCCCCC >Mature Secondary Structure MLLAAFGLAASAGVPAQCLPEFKNGWIRIPPPGGMGMAAGFGQFHNGCAQPLTITAANSS CEEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCHHCCCCCCCEEEEECCCC VFADVSLHETTQVNGVSRMRAVPELALPAGKSVPLAPGGLHLMLMDASAPLQEGAQVPVS EEEEEEECCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE FTLQDGRQIKATLEARKRAPGS EEECCCCEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA