Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241994
Identifier: 21241994
GI number: 21241994
Start: 1417293
End: 1417892
Strand: Direct
Name: 21241994
Synonym: XAC1240
Alternate gene names: NA
Gene position: 1417293-1417892 (Clockwise)
Preceding gene: 21241991
Following gene: 21241999
Centisome position: 27.38
GC content: 67.67
Gene sequence:
>600_bases ATGACGTCACGCAAACCCTTTCTCGCCCTGGCCGTGCTGGCCGCGCTGTCCACCGGCACCGCGTTCGCCGCCACCGTGCC GGCTCCCGGCGATGCGCCGCGGCCTGCCAAACTCGACAAGAACGGCGATGGCGTGATCGACCGCAGCGAAGCGGCCGCCG ATCCGACGCTGGCCGCGCAGTTCGATACGCTGGACACCAACAAGGACGGCAAGCTGTCGCGCGACGAGCGCCCGCATCAT CGTGGCCCGGGTCGCGATGGGCGCGGCGGACGCGGCGAATGGATGGCCAAGCTCGATACCAACAAGGATGGCCGTATCAG CCGCGAAGAAGCCAAGGCCGACCCCAAATTCGCTGCGCGCTTCGACCAGATGGATCTCAACAAGGACGGCTTCGTCGACC GTGCCGACCGTGAATTGCGCATGCAGCAGCATCGCGATGCGTGGTTCGCCAAGGCCGACACCGACAAGGACGGCAAGTTG AGCAAGGCCGAGTTCGATGCCGCATCCAAGTGGCGTGGCGGGCACGGGCCGGGCGGGATGGGCAGGCACGGCGACGATGG CAAGCCGTCACCGGCAACCGCGCCTGCGACCAACCGCTGA
Upstream 100 bases:
>100_bases GGGGGTGTTGGTGGCAGCGCACGGGCGATCCGAACGCACCACCCACGCGATGCGGCCCATGCAGGTGCCGCGTGTGGTTC CTATCTTCCAGGAGTGTCTC
Downstream 100 bases:
>100_bases GGCATCGCCGACCGCGGCGCTCGTTGCGCATTGGCGAGTGCCGCTCGGGTGAGCGGTGAGTTCACCCAGCTGTTTGCAGT ACGTAACAAGGCGCCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTSRKPFLALAVLAALSTGTAFAATVPAPGDAPRPAKLDKNGDGVIDRSEAAADPTLAAQFDTLDTNKDGKLSRDERPHH RGPGRDGRGGRGEWMAKLDTNKDGRISREEAKADPKFAARFDQMDLNKDGFVDRADRELRMQQHRDAWFAKADTDKDGKL SKAEFDAASKWRGGHGPGGMGRHGDDGKPSPATAPATNR
Sequences:
>Translated_199_residues MTSRKPFLALAVLAALSTGTAFAATVPAPGDAPRPAKLDKNGDGVIDRSEAAADPTLAAQFDTLDTNKDGKLSRDERPHH RGPGRDGRGGRGEWMAKLDTNKDGRISREEAKADPKFAARFDQMDLNKDGFVDRADRELRMQQHRDAWFAKADTDKDGKL SKAEFDAASKWRGGHGPGGMGRHGDDGKPSPATAPATNR >Mature_198_residues TSRKPFLALAVLAALSTGTAFAATVPAPGDAPRPAKLDKNGDGVIDRSEAAADPTLAAQFDTLDTNKDGKLSRDERPHHR GPGRDGRGGRGEWMAKLDTNKDGRISREEAKADPKFAARFDQMDLNKDGFVDRADRELRMQQHRDAWFAKADTDKDGKLS KAEFDAASKWRGGHGPGGMGRHGDDGKPSPATAPATNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21418; Mature: 21287
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2 L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRKPFLALAVLAALSTGTAFAATVPAPGDAPRPAKLDKNGDGVIDRSEAAADPTLAAQ CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCHHCCCCCEEEE FDTLDTNKDGKLSRDERPHHRGPGRDGRGGRGEWMAKLDTNKDGRISREEAKADPKFAAR ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHCCCHHHHH FDQMDLNKDGFVDRADRELRMQQHRDAWFAKADTDKDGKLSKAEFDAASKWRGGHGPGGM HHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHCHHHHCCCCCCCCCC GRHGDDGKPSPATAPATNR CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSRKPFLALAVLAALSTGTAFAATVPAPGDAPRPAKLDKNGDGVIDRSEAAADPTLAAQ CCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCHHCCCCCEEEE FDTLDTNKDGKLSRDERPHHRGPGRDGRGGRGEWMAKLDTNKDGRISREEAKADPKFAAR ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHCCCHHHHH FDQMDLNKDGFVDRADRELRMQQHRDAWFAKADTDKDGKLSKAEFDAASKWRGGHGPGGM HHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHCHHHHCCCCCCCCCC GRHGDDGKPSPATAPATNR CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA