Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is mobL [H]
Identifier: 21241860
GI number: 21241860
Start: 1255006
End: 1256592
Strand: Direct
Name: mobL [H]
Synonym: XAC1104
Alternate gene names: 21241860
Gene position: 1255006-1256592 (Clockwise)
Preceding gene: 21241859
Following gene: 21241864
Centisome position: 24.25
GC content: 67.86
Gene sequence:
>1587_bases GTGTCTACGGAACCCTGGGCGTATCACCGCGCCAAAGGGCATTCGTCCATCGCAGCGGCCGCCTACCGCGCTGGCCTGCT GCTGGAGGACGTGCTCACCGGCCTGCGCCACGACTACCGCCGGCGGGACGGCGTGGTCGAAACGCGCTGCATCGCCCCCG AAGACGCGCCCGATTGGGCCCTGGTGCCCGCTGAGCTCTGGCCGGCGGCAGAAGCAGCCGAGCGCCGGAAAGATGCGACC GTCGCGCGCGAGTTCGAGTTTGCGTTGCCCCACGAACTCGATGACCTCCAGCGGTCCGACCTGGCCGTCGAAGTCACCCG TGCGCTCGTCGGGCGCTATGGTTTTGCGGCGCAGGCCAGCATCCACAGTCCTGGTTCCAAGGATGGGCTGAACTGGCACG TCCACGTCCTGGCAACGACGCGTCGCATCGGACCGGGCGGCCTCACCGACAAAACCCGGGAACTCGACGGCGGGCCGTCG GGCAGGGCAGAGGTGGAGTGGGTCCGCGAGCTGGTCGCTTCCACCATCAATGCCCATCTTGAGAAGGCGGCGCTCGAGAT TCGGGTGGACCATCGCAGTCTGGCCGCTCAGGCGGACGACGCGCTGGCGCGCGGCGATTTAGCCGCCGCTGCCGTGCTGT CCCGGGAGCCGACCAAGCACGTCGGCAAAAATGGCACAGCGCTAACCCGGCGGGGCCAGCCGTCGGAGCGTTCGGACGCA AACCGTCGAATCGAAGAGACCAACGAGGAGACCTTCCGAAAACTCATTGCCGTTTTCGAGCAGGAAGGGCGTGTCATGCC GGTGCCCGACGGTCACAGCCCGGCCCAGGCCGAGCGCGAGGCTCGCCGACCTTCTGATGTGCTGTTCTTGCCGCTCAGAC GCGGGGCAGGGCACATCGAGGTGTCCCGCAGCATGGCGCCCATTGCCCGTGGGCTCGGACTGATGGAGGCCGAGGAGGCC AAGCCGTCGCGCGAGCCACGTTCGGTCTCGCAGCTCGCGGAGGAGGCCAGCGACGAGTGGGGCGTGGCTGCTCAAGCCGA TCCCCGCTTGGCTCAAACGCTCCAAACAACCCTGGACCTGCTGCAGTGGATCAGAGAGCGCGTGACCGCCTTCGCCGAAG CGGCGCAGCTCCGTCCAGACCTCAACGAATTGCTGCGCCGGTTGCGGCGCTTCAAGGCAGCCACCATGAAGTTTGCCCGG CGGCTACTGGCGGTGCGCCGAGCGGAGAAGCTGCACCACATGGCCGAGAACGCGTGGCACGACTTCCTGGCGAACAATCC CGAGCCGGGAGCCTCATGGACGCAGGGAGACTGGAAGCAGCGGCGTGGGCGTCGGTTGAGCACCCTCGAAGCCCGAGCCG CAGAGCTGACCGATGCAAGGGCCAGGGTGACCCCGGAGGAACAAGCCCTCTGCGAGAAAGAAGCGTCGGCCAGCGCGGCG CATCTGGAGGCTTGGAGCCGGGACATGCTTCAGCGCTATCCCCTGCAGCTCGACATGGCGATCGAACCCGATCAGCCCCG GCCAAGCCCTGCCGTCTCCGCCTCCCCTGCTCCCGCCTACGTTCCCAAGCCGCCGCGCCTCCACTGA
Upstream 100 bases:
>100_bases CTACATCGAGATGTTCTACAACCCACAACGCCGTCATGGTTCAACTGGCGACCTGTCCCCTGTAGAGTTTGAACGGCGCT ACGCGCAACGAGGGTCTTGA
Downstream 100 bases:
>100_bases AAACAAAGAGCCCCGCAGTGTGGGGCTCAATGTTTGCGGGCCCTTGGCCGCCTCAGTGAACCGTTGGGCGCTTCTTGCTG CGGACTGGATCCATCTGCGC
Product: plasmid mobilization protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MSTEPWAYHRAKGHSSIAAAAYRAGLLLEDVLTGLRHDYRRRDGVVETRCIAPEDAPDWALVPAELWPAAEAAERRKDAT VAREFEFALPHELDDLQRSDLAVEVTRALVGRYGFAAQASIHSPGSKDGLNWHVHVLATTRRIGPGGLTDKTRELDGGPS GRAEVEWVRELVASTINAHLEKAALEIRVDHRSLAAQADDALARGDLAAAAVLSREPTKHVGKNGTALTRRGQPSERSDA NRRIEETNEETFRKLIAVFEQEGRVMPVPDGHSPAQAEREARRPSDVLFLPLRRGAGHIEVSRSMAPIARGLGLMEAEEA KPSREPRSVSQLAEEASDEWGVAAQADPRLAQTLQTTLDLLQWIRERVTAFAEAAQLRPDLNELLRRLRRFKAATMKFAR RLLAVRRAEKLHHMAENAWHDFLANNPEPGASWTQGDWKQRRGRRLSTLEARAAELTDARARVTPEEQALCEKEASASAA HLEAWSRDMLQRYPLQLDMAIEPDQPRPSPAVSASPAPAYVPKPPRLH
Sequences:
>Translated_528_residues MSTEPWAYHRAKGHSSIAAAAYRAGLLLEDVLTGLRHDYRRRDGVVETRCIAPEDAPDWALVPAELWPAAEAAERRKDAT VAREFEFALPHELDDLQRSDLAVEVTRALVGRYGFAAQASIHSPGSKDGLNWHVHVLATTRRIGPGGLTDKTRELDGGPS GRAEVEWVRELVASTINAHLEKAALEIRVDHRSLAAQADDALARGDLAAAAVLSREPTKHVGKNGTALTRRGQPSERSDA NRRIEETNEETFRKLIAVFEQEGRVMPVPDGHSPAQAEREARRPSDVLFLPLRRGAGHIEVSRSMAPIARGLGLMEAEEA KPSREPRSVSQLAEEASDEWGVAAQADPRLAQTLQTTLDLLQWIRERVTAFAEAAQLRPDLNELLRRLRRFKAATMKFAR RLLAVRRAEKLHHMAENAWHDFLANNPEPGASWTQGDWKQRRGRRLSTLEARAAELTDARARVTPEEQALCEKEASASAA HLEAWSRDMLQRYPLQLDMAIEPDQPRPSPAVSASPAPAYVPKPPRLH >Mature_527_residues STEPWAYHRAKGHSSIAAAAYRAGLLLEDVLTGLRHDYRRRDGVVETRCIAPEDAPDWALVPAELWPAAEAAERRKDATV AREFEFALPHELDDLQRSDLAVEVTRALVGRYGFAAQASIHSPGSKDGLNWHVHVLATTRRIGPGGLTDKTRELDGGPSG RAEVEWVRELVASTINAHLEKAALEIRVDHRSLAAQADDALARGDLAAAAVLSREPTKHVGKNGTALTRRGQPSERSDAN RRIEETNEETFRKLIAVFEQEGRVMPVPDGHSPAQAEREARRPSDVLFLPLRRGAGHIEVSRSMAPIARGLGLMEAEEAK PSREPRSVSQLAEEASDEWGVAAQADPRLAQTLQTTLDLLQWIRERVTAFAEAAQLRPDLNELLRRLRRFKAATMKFARR LLAVRRAEKLHHMAENAWHDFLANNPEPGASWTQGDWKQRRGRRLSTLEARAAELTDARARVTPEEQALCEKEASASAAH LEAWSRDMLQRYPLQLDMAIEPDQPRPSPAVSASPAPAYVPKPPRLH
Specific function: This protein is essential to promote the specific transfer of the plasmid in the presence of conjugative plasmids [H]
COG id: COG0507
COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mobA/mobL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005053 [H]
Pfam domain/function: PF03389 MobA_MobL [H]
EC number: NA
Molecular weight: Translated: 58619; Mature: 58487
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEPWAYHRAKGHSSIAAAAYRAGLLLEDVLTGLRHDYRRRDGVVETRCIAPEDAPDWA CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCE LVPAELWPAAEAAERRKDATVAREFEFALPHELDDLQRSDLAVEVTRALVGRYGFAAQAS EECHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IHSPGSKDGLNWHVHVLATTRRIGPGGLTDKTRELDGGPSGRAEVEWVRELVASTINAHL CCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH EKAALEIRVDHRSLAAQADDALARGDLAAAAVLSREPTKHVGKNGTALTRRGQPSERSDA HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCCCHH NRRIEETNEETFRKLIAVFEQEGRVMPVPDGHSPAQAEREARRPSDVLFLPLRRGAGHIE HHHHHHCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEE VSRSMAPIARGLGLMEAEEAKPSREPRSVSQLAEEASDEWGVAAQADPRLAQTLQTTLDL EHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LQWIRERVTAFAEAAQLRPDLNELLRRLRRFKAATMKFARRLLAVRRAEKLHHMAENAWH HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFLANNPEPGASWTQGDWKQRRGRRLSTLEARAAELTDARARVTPEEQALCEKEASASAA HHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH HLEAWSRDMLQRYPLQLDMAIEPDQPRPSPAVSASPAPAYVPKPPRLH HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STEPWAYHRAKGHSSIAAAAYRAGLLLEDVLTGLRHDYRRRDGVVETRCIAPEDAPDWA CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCE LVPAELWPAAEAAERRKDATVAREFEFALPHELDDLQRSDLAVEVTRALVGRYGFAAQAS EECHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IHSPGSKDGLNWHVHVLATTRRIGPGGLTDKTRELDGGPSGRAEVEWVRELVASTINAHL CCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH EKAALEIRVDHRSLAAQADDALARGDLAAAAVLSREPTKHVGKNGTALTRRGQPSERSDA HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCCCHH NRRIEETNEETFRKLIAVFEQEGRVMPVPDGHSPAQAEREARRPSDVLFLPLRRGAGHIE HHHHHHCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEE VSRSMAPIARGLGLMEAEEAKPSREPRSVSQLAEEASDEWGVAAQADPRLAQTLQTTLDL EHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LQWIRERVTAFAEAAQLRPDLNELLRRLRRFKAATMKFARRLLAVRRAEKLHHMAENAWH HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFLANNPEPGASWTQGDWKQRRGRRLSTLEARAAELTDARARVTPEEQALCEKEASASAA HHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH HLEAWSRDMLQRYPLQLDMAIEPDQPRPSPAVSASPAPAYVPKPPRLH HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2280689 [H]