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The map label for this gene is yebA [C]

Identifier: 21241557

GI number: 21241557

Start: 933018

End: 933959

Strand: Direct

Name: yebA [C]

Synonym: XAC0787

Alternate gene names: 21241557

Gene position: 933018-933959 (Clockwise)

Preceding gene: 161485717

Following gene: 21241558

Centisome position: 18.03

GC content: 65.5

Gene sequence:

>942_bases
ATGGCGTTGAACAAAGTTGTAATCAAATCTCGGCAGACCCGGGCGCAGCGTGTGGCCCGACAGTTCCAGGACTTTGCAGC
GGATCGACCGATGGTGGTGCTTGGCGCGGTATTGGGCCTGGGCATGTTGATCGGCGTCGGTGCAAGCACCGCCACAGGCA
TGGTGACCAATTCGGCGCTGCAGGCCAAGGTTGCGCAGCAGCAGGCCGAGCTGGCCCAGGCGCAGCGCGCCTCGCAGGCG
CAGGTCAATGCGCTGGCCGCCCGTCTGGGCGAGCTGCAGGCGCAGGCCACCCGCCTCAATGCGTTGGGCGAGCGCCTGAC
CGAAATGGGCAAGTTGAAGGACGGCGAGTTCGACTTCGATGAGCCGGTCGGCGTTGGTGGCGGCGATGAGCCGGTCAGCG
ACATGCCGGTGCAAGACTTCAAGGAGACGTTGGGGCAAGTGGAGCAGCAGTTCTCCGCCTCCGGCCAGCAATTGAACGTG
CTGGCCTCGCTGATGTTCGATCATCAGCTGGAGCAGAATTCGGTGCCCTCGCGGATGCCGATCCGCAACACCTACATCAC
CTCCGGTTTCGGCGGCCGCGCCGACCCGTTCGACGGCGGTTCGGCCTTCCACAAGGGCGTGGACTTCCATGCCAACGTGG
GCGACCCGGTGCTGTCGGTCGCCGATGGCGTGGTCAGCTATGCCGGTGTACGCGGCGGTTACGGCAACGTGGTCGAAGTG
GATCACGGCAACGGTTATGTGACCCGCTACGCGCACAACTCGCGCCTGGTAGTGAAGGTGGGCGATCTGGTGCGCGCCGG
CCAGCAGGTCGCGCGTGCCGGTTCCAGCGGCCGCTCCACCGGTGCACACGTGCATTTCGAGGTGTGGGCGGACGGGCGCG
TGGTCAATCCGCGCAAATTCCTGGGTGAAACCACGCCAGTGGGACGTCAGGGGCGCGGTTGA

Upstream 100 bases:

>100_bases
GCAAGGGGTCGCCAGCCTTTTCCCCCAGCGCGGCCTCGATGGCCGGTTGTGGAGTGGAAGGGTTGCGTGCGTTGGACTTG
GGCTTGGACATGACACTCAT

Downstream 100 bases:

>100_bases
CGAGGGCGCGGGCCGCGCTTGATTCGTGAAGGCCCGCCCCAAGCTACAATAGGGTGTTGCCATCGACAGGGCGCAGTGCG
CCCTGTTTCGTTTACGGCGG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MALNKVVIKSRQTRAQRVARQFQDFAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSALQAKVAQQQAELAQAQRASQA
QVNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFDEPVGVGGGDEPVSDMPVQDFKETLGQVEQQFSASGQQLNV
LASLMFDHQLEQNSVPSRMPIRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVLSVADGVVSYAGVRGGYGNVVEV
DHGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTGAHVHFEVWADGRVVNPRKFLGETTPVGRQGRG

Sequences:

>Translated_313_residues
MALNKVVIKSRQTRAQRVARQFQDFAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSALQAKVAQQQAELAQAQRASQA
QVNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFDEPVGVGGGDEPVSDMPVQDFKETLGQVEQQFSASGQQLNV
LASLMFDHQLEQNSVPSRMPIRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVLSVADGVVSYAGVRGGYGNVVEV
DHGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTGAHVHFEVWADGRVVNPRKFLGETTPVGRQGRG
>Mature_312_residues
ALNKVVIKSRQTRAQRVARQFQDFAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSALQAKVAQQQAELAQAQRASQAQ
VNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFDEPVGVGGGDEPVSDMPVQDFKETLGQVEQQFSASGQQLNVL
ASLMFDHQLEQNSVPSRMPIRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVLSVADGVVSYAGVRGGYGNVVEVD
HGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTGAHVHFEVWADGRVVNPRKFLGETTPVGRQGRG

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=122, Percent_Identity=44.2622950819672, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=39.3939393939394, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082297, Length=103, Percent_Identity=41.747572815534, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082174, Length=108, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33186; Mature: 33055

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNKVVIKSRQTRAQRVARQFQDFAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSAL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QAKVAQQQAELAQAQRASQAQVNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EPVGVGGGDEPVSDMPVQDFKETLGQVEQQFSASGQQLNVLASLMFDHQLEQNSVPSRMP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
IRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVLSVADGVVSYAGVRGGYGNVVEV
CCCEEEECCCCCCCCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
DHGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTGAHVHFEVWADGRVVNPRKF
ECCCCEEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEEECHHHH
LGETTPVGRQGRG
HCCCCCCCCCCCC
>Mature Secondary Structure 
ALNKVVIKSRQTRAQRVARQFQDFAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSAL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QAKVAQQQAELAQAQRASQAQVNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EPVGVGGGDEPVSDMPVQDFKETLGQVEQQFSASGQQLNVLASLMFDHQLEQNSVPSRMP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
IRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVLSVADGVVSYAGVRGGYGNVVEV
CCCEEEECCCCCCCCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
DHGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTGAHVHFEVWADGRVVNPRKF
ECCCCEEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEEECHHHH
LGETTPVGRQGRG
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]