Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241525
Identifier: 21241525
GI number: 21241525
Start: 894757
End: 896115
Strand: Direct
Name: 21241525
Synonym: XAC0754
Alternate gene names: NA
Gene position: 894757-896115 (Clockwise)
Preceding gene: 21241524
Following gene: 21241526
Centisome position: 17.29
GC content: 65.71
Gene sequence:
>1359_bases ATGCCGATCAACCGAACCGGCCTGCCGCATGCTGTGGCGTCGACCAGCCAAACGCAGGAGGCGTTGACGTCACAGGCTTC GGGGAGCCAAGGAGTCCTCGCCCCAGGCGCAGTGCCAACCCAGCGTGCCGAGACCTTCGACGGACTTTCTGCGCTGCCGA ATGATCTCCGCCGCGAGATTGTGCAGCGGTGCGGACCACGCAGCCTCGTGCGCCTGGGTAGCGTCTCGCGGCAGATGGCG GAGGACACCAGCGGGATGCGAGCGTCCCTGACCGCGCGGCCGCGCTATGACCCGAGCTTGGAGTTCGGGGCCGTCCATAG TGCAGAAAGCATGCGCGTCGCCCTGGACGAGGTGACGCATTTCCCCTACCCGGACGATGAGGATCGCAGCGAGCAGATAT TGCGCGGATACGGAAGGCTTGCGGCGCGGATTCCATCATTGCCGCAGGCGCAGCGATTTGAGGCGTTTACCGCGGTGTTG AATCACGCCACCCGCTATTCCGGGAATATGGCATTTCGCGTGGTGGCGCGCTTGACGGATGACCTGGGATGCTTGCCCGC GGACCTGCGCGCGCTCGCCTTGCATGCAATCTTGCCCAGTTTGATTGCCACGCGAAGGCAAGCGCTGCAGGCTGCTGCCG GAGCAGCGCACGGTGGCCATATGGCGGCAGTAGCGGAGGCTGATGCAGGGGGCGTGCAAGGTGATGCTGCGCCAGGAGCG CAAGGCGCCGTGGCCCCGGTCCAGGGCGGCGCTGCCGGAGGCATTGGCGGAGCACTTCCGTTTCATTTGCTGGCATCGGC GATCAGGCAGCTGCCCGAGGAGGCAGTCAACCTGGCGATCACCGAGGCTGCCGCGCTCCAGACCGGCCCCCGCCTGCTGG CGGAGGTGACCCTGCGCCTGCATCTTGTCGGATTGGAGCCGATCCATCGATTCCAGCAGGCGTATGCGCAGCTTGCCGAG CACCTCGCGCGTTCGGGCGATGGAGCCGAAGCCTTGACCCACTTGGTGGCCTTGTTGAACAGACTGCCCAATCCGGGAGT GCGCCAAGCCGCCTTCAGGGAATTGACGCGGGCCGTGCATGCATTGGACAGCACCGAGAGTGGCGCCGCGGTGTTGAGGC GGTTGGCTGGGGCGTTGCCACACCAGCCTGCCGCGGTGCGTTATCTATGCAGCCTGGATGTGCTTGCAGCGGCAGGGAGC CTCTTCCCGAGCGAGCAGATACCGGTCATCGCCACCGTCCGTGCGCAGGCTGCTGCGATCCCGAACCAGGCCGCTGAACT CATCGCCAGATGCGATGCCGCGATCGCCACGGCCAGCATGATGCTTGCGACTGTGTCGCGCAGGTATCTGGACATGTGA
Upstream 100 bases:
>100_bases CGATTTCTGACAGTGCGCGCGCACACGATGCCGCTTTCGGGAAAGTAAGCACGAAGCCTAACTCGATGCCGCTGCTGCGG CACACCGCAGGAGACCCGAG
Downstream 100 bases:
>100_bases GCACTGTTCGATTGAGTGTGGTGTGGTCACACCAGCGGACGCGCATCCGCCTGGCGCCACCCTGTCCGGCGCGACCCTAG AGCAGATGGGGCTTCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MPINRTGLPHAVASTSQTQEALTSQASGSQGVLAPGAVPTQRAETFDGLSALPNDLRREIVQRCGPRSLVRLGSVSRQMA EDTSGMRASLTARPRYDPSLEFGAVHSAESMRVALDEVTHFPYPDDEDRSEQILRGYGRLAARIPSLPQAQRFEAFTAVL NHATRYSGNMAFRVVARLTDDLGCLPADLRALALHAILPSLIATRRQALQAAAGAAHGGHMAAVAEADAGGVQGDAAPGA QGAVAPVQGGAAGGIGGALPFHLLASAIRQLPEEAVNLAITEAAALQTGPRLLAEVTLRLHLVGLEPIHRFQQAYAQLAE HLARSGDGAEALTHLVALLNRLPNPGVRQAAFRELTRAVHALDSTESGAAVLRRLAGALPHQPAAVRYLCSLDVLAAAGS LFPSEQIPVIATVRAQAAAIPNQAAELIARCDAAIATASMMLATVSRRYLDM
Sequences:
>Translated_452_residues MPINRTGLPHAVASTSQTQEALTSQASGSQGVLAPGAVPTQRAETFDGLSALPNDLRREIVQRCGPRSLVRLGSVSRQMA EDTSGMRASLTARPRYDPSLEFGAVHSAESMRVALDEVTHFPYPDDEDRSEQILRGYGRLAARIPSLPQAQRFEAFTAVL NHATRYSGNMAFRVVARLTDDLGCLPADLRALALHAILPSLIATRRQALQAAAGAAHGGHMAAVAEADAGGVQGDAAPGA QGAVAPVQGGAAGGIGGALPFHLLASAIRQLPEEAVNLAITEAAALQTGPRLLAEVTLRLHLVGLEPIHRFQQAYAQLAE HLARSGDGAEALTHLVALLNRLPNPGVRQAAFRELTRAVHALDSTESGAAVLRRLAGALPHQPAAVRYLCSLDVLAAAGS LFPSEQIPVIATVRAQAAAIPNQAAELIARCDAAIATASMMLATVSRRYLDM >Mature_451_residues PINRTGLPHAVASTSQTQEALTSQASGSQGVLAPGAVPTQRAETFDGLSALPNDLRREIVQRCGPRSLVRLGSVSRQMAE DTSGMRASLTARPRYDPSLEFGAVHSAESMRVALDEVTHFPYPDDEDRSEQILRGYGRLAARIPSLPQAQRFEAFTAVLN HATRYSGNMAFRVVARLTDDLGCLPADLRALALHAILPSLIATRRQALQAAAGAAHGGHMAAVAEADAGGVQGDAAPGAQ GAVAPVQGGAAGGIGGALPFHLLASAIRQLPEEAVNLAITEAAALQTGPRLLAEVTLRLHLVGLEPIHRFQQAYAQLAEH LARSGDGAEALTHLVALLNRLPNPGVRQAAFRELTRAVHALDSTESGAAVLRRLAGALPHQPAAVRYLCSLDVLAAAGSL FPSEQIPVIATVRAQAAAIPNQAAELIARCDAAIATASMMLATVSRRYLDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47341; Mature: 47209
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINRTGLPHAVASTSQTQEALTSQASGSQGVLAPGAVPTQRAETFDGLSALPNDLRREI CCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHCHHHHHHHH VQRCGPRSLVRLGSVSRQMAEDTSGMRASLTARPRYDPSLEFGAVHSAESMRVALDEVTH HHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC FPYPDDEDRSEQILRGYGRLAARIPSLPQAQRFEAFTAVLNHATRYSGNMAFRVVARLTD CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DLGCLPADLRALALHAILPSLIATRRQALQAAAGAAHGGHMAAVAEADAGGVQGDAAPGA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC QGAVAPVQGGAAGGIGGALPFHLLASAIRQLPEEAVNLAITEAAALQTGPRLLAEVTLRL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH HLVGLEPIHRFQQAYAQLAEHLARSGDGAEALTHLVALLNRLPNPGVRQAAFRELTRAVH HEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ALDSTESGAAVLRRLAGALPHQPAAVRYLCSLDVLAAAGSLFPSEQIPVIATVRAQAAAI HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHC PNQAAELIARCDAAIATASMMLATVSRRYLDM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PINRTGLPHAVASTSQTQEALTSQASGSQGVLAPGAVPTQRAETFDGLSALPNDLRREI CCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHCHHHHHHHH VQRCGPRSLVRLGSVSRQMAEDTSGMRASLTARPRYDPSLEFGAVHSAESMRVALDEVTH HHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC FPYPDDEDRSEQILRGYGRLAARIPSLPQAQRFEAFTAVLNHATRYSGNMAFRVVARLTD CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DLGCLPADLRALALHAILPSLIATRRQALQAAAGAAHGGHMAAVAEADAGGVQGDAAPGA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC QGAVAPVQGGAAGGIGGALPFHLLASAIRQLPEEAVNLAITEAAALQTGPRLLAEVTLRL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH HLVGLEPIHRFQQAYAQLAEHLARSGDGAEALTHLVALLNRLPNPGVRQAAFRELTRAVH HEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ALDSTESGAAVLRRLAGALPHQPAAVRYLCSLDVLAAAGSLFPSEQIPVIATVRAQAAAI HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHC PNQAAELIARCDAAIATASMMLATVSRRYLDM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA