Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is ycjY [C]

Identifier: 21241524

GI number: 21241524

Start: 892952

End: 894532

Strand: Direct

Name: ycjY [C]

Synonym: XAC0753

Alternate gene names: 21241524

Gene position: 892952-894532 (Clockwise)

Preceding gene: 21241523

Following gene: 21241525

Centisome position: 17.25

GC content: 66.16

Gene sequence:

>1581_bases
ATGAGCAAGCGTTGGATCGGGAGCATCGCCGCACTGGCGTTGCTGTTGGCATCGGCGTCGGCCGTGGCGGGCGCCTTCAG
CAAGACCTATGAACGCATTCCAGGCTGGGACGGCGCCCAAATGGGCGCATTGGTGCTGGTGCCGCAAGGGCAGGGCGCCG
GGCCGTTTCCGCTGATCGTGATGCCGGCCAGCTGGTCGCTGCCCAATCTGGAATATCTGGGGCGCGCCACCCAACTGGCC
AGCGACGGCTACGTGGTGGTCAGCTATACCTCGCGTGGATTCTGGGATTCGGCTGGGCAGATCGATATCGCCGGGCCGGA
CACGGTGGAAGACGTCAGTGCGGTGATCGACTGGGCATTGGCGCATACACCGGCCAATCCCAATGCGATCGGCGCGTCGG
GCATCTCGTACGGCGCAGGCATCAGCCTGCTGGCGGCCGAGCGCGACCCGCGTATCAAGGCGGTGGCCGCGCTCAGCGGT
TGGGCCGATCTGGAAGCCTCGCTGTATTCCAATCGCACGGTGAGCCAGCAGGGCGTGGGACTGCTGGTGGGTGCGGGCGC
ACTGACCGGCCGGGCCGGCCCGGATCTGGCGCAGATTGGCGCACGCGTGGCGCAAGGCGATTACGACGGCGCGGTGCAGG
GCTTCCTGCCGCAGGCCGCCTCGCGCAGCCCTGCGACCGATGTGGCAGCGCTCAATGTGCGTGGTACCGCGGTCCTGTTG
GGTAACGCCTTCAACGACGGATTGTTTCCGCCCAATCAGACCATTGCGTTCTTCAACCAGTTGCGTGGCCCCAAACAACT
GCTGCTCAGCCAGGGCGATCACGCCACCGCAGAGCTGCCCGGCGCATTGGGGTTACCGAATGAGATCTATACCGCGACCA
CGCGCTGGTTCGATCGCCATCTCAAGCAGCTTCGCAACGGCGTGGATGCAGAAGCGCCAGTGCGGCTATCGCCACGTGCG
GGCCAATGGCTGGACTATCCGGACTGGGCATCGGTCCAACAGGCCACGACACAGCTTGGTCTGTCCGCACCAGCAGGGTT
GCTGAGCCCCACCGGTGGATTGACCGGAGGGACGGCGAGCGGTTGGCAATGGCGCATCGCCACCGACGTGCCGAGCGTGG
CCGATTCCGGGGTGGTGCTGGTCAGCGGTTTGCTGCAAGGCATCGGCCTGCCGGTGAGCACCTCCATTCCGCTGGTCAAC
CGCGCCGCCGCCGCAGTGTGGGTCGGCTCGCCATCGAACGGCACCCGGCGCCTGGCCGGTCGCCCGTCGCTACGCGTCAC
AGTGGTGCCCAGTCAGTCCAACGTCAGCCTTTTCGCGTATCTCTACTGCATGGATGCGCTGGGCGTGGCGAAACTGATTA
CGCATGCGCCGTATTCGTTGCGCAATGCCACATCGGGGCGCGCAGTCACGCTGGACTGGCCACTGCAGGCGGCGGCAACC
GAGATTCCCGCAGGGCAGCGATTGGTCTTGGTGATCGACACCCGCGACGCGCGCTATACCGATGCCAGCGAGGGCGGTGG
CACGGTGACATTCACCTCGCCAGTTGCAGCGCCGTCCGTGTTGAACGTGCCGCTGCGGTAG

Upstream 100 bases:

>100_bases
CCGTCTGGTACGTTCGCCACGTTCTCCCCCCCCCCAACCACGGATGCATCGCAGTTGCCGCTGGGCCATCCCGGCCCGGC
TTTGCGTGGGAGACAGCAGC

Downstream 100 bases:

>100_bases
GGCGGCACGCCGCATCTGCATCGATCCCAGGTCGCCCGCCGCGGTACTAGCGAGCAGCGGCGGATGCAGGCCATCCGCAG
AACCCACATCTGCACCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase S; Secreted Esterase/Lipase/Thioesterase Family Protein; S15 Family Peptidase; X-Pro Dipeptidyl-Peptidase Domain Protein; X-Pro Dipeptidyl-Peptidase Protein; S15-Family Peptidase; CocE/NonD Family Hydrolase; Hydrolase CocE/NonD Family Protein; Hydrolase

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSKRWIGSIAALALLLASASAVAGAFSKTYERIPGWDGAQMGALVLVPQGQGAGPFPLIVMPASWSLPNLEYLGRATQLA
SDGYVVVSYTSRGFWDSAGQIDIAGPDTVEDVSAVIDWALAHTPANPNAIGASGISYGAGISLLAAERDPRIKAVAALSG
WADLEASLYSNRTVSQQGVGLLVGAGALTGRAGPDLAQIGARVAQGDYDGAVQGFLPQAASRSPATDVAALNVRGTAVLL
GNAFNDGLFPPNQTIAFFNQLRGPKQLLLSQGDHATAELPGALGLPNEIYTATTRWFDRHLKQLRNGVDAEAPVRLSPRA
GQWLDYPDWASVQQATTQLGLSAPAGLLSPTGGLTGGTASGWQWRIATDVPSVADSGVVLVSGLLQGIGLPVSTSIPLVN
RAAAAVWVGSPSNGTRRLAGRPSLRVTVVPSQSNVSLFAYLYCMDALGVAKLITHAPYSLRNATSGRAVTLDWPLQAAAT
EIPAGQRLVLVIDTRDARYTDASEGGGTVTFTSPVAAPSVLNVPLR

Sequences:

>Translated_526_residues
MSKRWIGSIAALALLLASASAVAGAFSKTYERIPGWDGAQMGALVLVPQGQGAGPFPLIVMPASWSLPNLEYLGRATQLA
SDGYVVVSYTSRGFWDSAGQIDIAGPDTVEDVSAVIDWALAHTPANPNAIGASGISYGAGISLLAAERDPRIKAVAALSG
WADLEASLYSNRTVSQQGVGLLVGAGALTGRAGPDLAQIGARVAQGDYDGAVQGFLPQAASRSPATDVAALNVRGTAVLL
GNAFNDGLFPPNQTIAFFNQLRGPKQLLLSQGDHATAELPGALGLPNEIYTATTRWFDRHLKQLRNGVDAEAPVRLSPRA
GQWLDYPDWASVQQATTQLGLSAPAGLLSPTGGLTGGTASGWQWRIATDVPSVADSGVVLVSGLLQGIGLPVSTSIPLVN
RAAAAVWVGSPSNGTRRLAGRPSLRVTVVPSQSNVSLFAYLYCMDALGVAKLITHAPYSLRNATSGRAVTLDWPLQAAAT
EIPAGQRLVLVIDTRDARYTDASEGGGTVTFTSPVAAPSVLNVPLR
>Mature_525_residues
SKRWIGSIAALALLLASASAVAGAFSKTYERIPGWDGAQMGALVLVPQGQGAGPFPLIVMPASWSLPNLEYLGRATQLAS
DGYVVVSYTSRGFWDSAGQIDIAGPDTVEDVSAVIDWALAHTPANPNAIGASGISYGAGISLLAAERDPRIKAVAALSGW
ADLEASLYSNRTVSQQGVGLLVGAGALTGRAGPDLAQIGARVAQGDYDGAVQGFLPQAASRSPATDVAALNVRGTAVLLG
NAFNDGLFPPNQTIAFFNQLRGPKQLLLSQGDHATAELPGALGLPNEIYTATTRWFDRHLKQLRNGVDAEAPVRLSPRAG
QWLDYPDWASVQQATTQLGLSAPAGLLSPTGGLTGGTASGWQWRIATDVPSVADSGVVLVSGLLQGIGLPVSTSIPLVNR
AAAAVWVGSPSNGTRRLAGRPSLRVTVVPSQSNVSLFAYLYCMDALGVAKLITHAPYSLRNATSGRAVTLDWPLQAAATE
IPAGQRLVLVIDTRDARYTDASEGGGTVTFTSPVAAPSVLNVPLR

Specific function: Unknown

COG id: COG2936

COG function: function code R; Predicted acyl esterases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54457; Mature: 54326

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRWIGSIAALALLLASASAVAGAFSKTYERIPGWDGAQMGALVLVPQGQGAGPFPLIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEE
MPASWSLPNLEYLGRATQLASDGYVVVSYTSRGFWDSAGQIDIAGPDTVEDVSAVIDWAL
ECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
AHTPANPNAIGASGISYGAGISLLAAERDPRIKAVAALSGWADLEASLYSNRTVSQQGVG
HCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCE
LLVGAGALTGRAGPDLAQIGARVAQGDYDGAVQGFLPQAASRSPATDVAALNVRGTAVLL
EEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCEEEEE
GNAFNDGLFPPNQTIAFFNQLRGPKQLLLSQGDHATAELPGALGLPNEIYTATTRWFDRH
ECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LKQLRNGVDAEAPVRLSPRAGQWLDYPDWASVQQATTQLGLSAPAGLLSPTGGLTGGTAS
HHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GWQWRIATDVPSVADSGVVLVSGLLQGIGLPVSTSIPLVNRAAAAVWVGSPSNGTRRLAG
CEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECC
RPSLRVTVVPSQSNVSLFAYLYCMDALGVAKLITHAPYSLRNATSGRAVTLDWPLQAAAT
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCHHHHH
EIPAGQRLVLVIDTRDARYTDASEGGGTVTFTSPVAAPSVLNVPLR
CCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEECCCCC
>Mature Secondary Structure 
SKRWIGSIAALALLLASASAVAGAFSKTYERIPGWDGAQMGALVLVPQGQGAGPFPLIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEE
MPASWSLPNLEYLGRATQLASDGYVVVSYTSRGFWDSAGQIDIAGPDTVEDVSAVIDWAL
ECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
AHTPANPNAIGASGISYGAGISLLAAERDPRIKAVAALSGWADLEASLYSNRTVSQQGVG
HCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCE
LLVGAGALTGRAGPDLAQIGARVAQGDYDGAVQGFLPQAASRSPATDVAALNVRGTAVLL
EEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCEEEEE
GNAFNDGLFPPNQTIAFFNQLRGPKQLLLSQGDHATAELPGALGLPNEIYTATTRWFDRH
ECCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LKQLRNGVDAEAPVRLSPRAGQWLDYPDWASVQQATTQLGLSAPAGLLSPTGGLTGGTAS
HHHHHCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GWQWRIATDVPSVADSGVVLVSGLLQGIGLPVSTSIPLVNRAAAAVWVGSPSNGTRRLAG
CEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECC
RPSLRVTVVPSQSNVSLFAYLYCMDALGVAKLITHAPYSLRNATSGRAVTLDWPLQAAAT
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCHHHHH
EIPAGQRLVLVIDTRDARYTDASEGGGTVTFTSPVAAPSVLNVPLR
CCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA