Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241437
Identifier: 21241437
GI number: 21241437
Start: 790743
End: 791021
Strand: Direct
Name: 21241437
Synonym: XAC0666
Alternate gene names: NA
Gene position: 790743-791021 (Clockwise)
Preceding gene: 21241435
Following gene: 21241438
Centisome position: 15.28
GC content: 62.72
Gene sequence:
>279_bases ATGGATATCAGCACCGACAACCCCGATCACGGCTTTCAGTTTCCCGGCACCTTCGAGCTCAGCGCCATGGGCACGGCTGA GCGTGGGCTGGAAACCGAGCTTCCGCGCCTGCTTGCCGCCACCGGCGTGGAGCTGCTGCAGGAGAGCGTGAGCTGGAAGC ATTCTTCCAGCGGAAAGTATGTCTCGGTCAAGATTGGCTTCCGTGCCCAAAGCCGCGAGCAGTTCGAGGCCGCGCACCAG GCGCTGCGCGATCATCCGGAAGTGAAGTGGACGCTGTAG
Upstream 100 bases:
>100_bases GGAAGGTTCGGTGCCGATTGCATGGCACCATAGACGAGCCAGGCGCGTCGATCGGTTGCGCGGGCTTGGGTTTGCCCATC GCCGGCCCGATAATGGGCGG
Downstream 100 bases:
>100_bases CGGCCGAGCCTGTGAGCAGCTCCATGGCTGGCCTGCCTGCGCAATTGCGCGACCTCGGCCAGCAAGACTACGCGCCTGTG TGGCGTGCAATGCAGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MDISTDNPDHGFQFPGTFELSAMGTAERGLETELPRLLAATGVELLQESVSWKHSSSGKYVSVKIGFRAQSREQFEAAHQ ALRDHPEVKWTL
Sequences:
>Translated_92_residues MDISTDNPDHGFQFPGTFELSAMGTAERGLETELPRLLAATGVELLQESVSWKHSSSGKYVSVKIGFRAQSREQFEAAHQ ALRDHPEVKWTL >Mature_92_residues MDISTDNPDHGFQFPGTFELSAMGTAERGLETELPRLLAATGVELLQESVSWKHSSSGKYVSVKIGFRAQSREQFEAAHQ ALRDHPEVKWTL
Specific function: Unknown
COG id: COG2921
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0250 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007454 [H]
Pfam domain/function: PF04359 DUF493 [H]
EC number: NA
Molecular weight: Translated: 10259; Mature: 10259
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISTDNPDHGFQFPGTFELSAMGTAERGLETELPRLLAATGVELLQESVSWKHSSSGKY CCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VSVKIGFRAQSREQFEAAHQALRDHPEVKWTL EEEEECCCCCCHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure MDISTDNPDHGFQFPGTFELSAMGTAERGLETELPRLLAATGVELLQESVSWKHSSSGKY CCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VSVKIGFRAQSREQFEAAHQALRDHPEVKWTL EEEEECCCCCCHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA