Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is mdcC
Identifier: 21241334
GI number: 21241334
Start: 664552
End: 665256
Strand: Direct
Name: mdcC
Synonym: XAC0563
Alternate gene names: NA
Gene position: 664552-665256 (Clockwise)
Preceding gene: 21241333
Following gene: 21241335
Centisome position: 12.84
GC content: 68.23
Gene sequence:
>705_bases ATGGACCTGAGCCGCTTGCTCGATCAGCTGTTTCCGCTCGGTCACGCCATCGCGCGCAACGACGATGTGCTCACCGGCAG TGCAACCACCGCCGCCGGCGACGTCACCGTGATCGGTACCGCCAACAAGCTCGAAGTCGGTGTCGATCACGCCTTGGCCT TGGCTGCCACTGTCCTGGCGAGTACCCGCGCTCACCCGCAGCGCCCGATCGTGATGCTGGCCGACACTGCCGGGCAGCGG CTGGCACGGCGCGACGAATTACTCGGCATCAACGGCTATTTCGCACATCTGGCACGTGCGCTGGAGTTGGCACGCAGGCG CGGGGCGCGGCTGATCACGCTGGTCTACGGCGAATCGGTCAGCGGTGGGTTCCTGTCGTTCGGCTTGATGGCCGACCATA TCCATGCATTGCCCGATGCGCAGATCCGGGTCATGGATCTGCGCGCGATGGCGCGCGTGACCAAGCAGTCGGTCGACACC TTGCAGGCGTTGAGCAAGAGCTCGCCGGTGTTCGCGCCAGGCGTGGAAAATTACGTGCGCATGGGCGCGGTGGAATCGCT GTGGGAGGGCGATCTGGCGCAGGCGCTGCTCGACGCACTGGCCGCGCCGGTCGACGGCGACCAGCGCCGCGCGCGCGGCG CGCAACGCGGCGGGCGCACGCTGGCGCGCGATGTCGCCAGCGCCGTGGTTGCGGGCGAGGCCTGA
Upstream 100 bases:
>100_bases GACTGGAGATCTGGACGCGCCAGGGCATTGTCGATGCGCAGCGCCTGCCGCTGCTCGATACCGAGGCCTTTCTTGCCGCA ACCGCAGACCGGAGCCTTCC
Downstream 100 bases:
>100_bases GCATGGCCGGCCGCCACGCCCTGGTGTGGTTACGCGAGGATGCGCAGTGGCAGGCCGTCACGTCTGGCGCGCAGCCACGG CTGCAGCAGTGGTTCGCGGC
Product: malonate decarboxylase gamma subunit
Products: NA
Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Gamma-Subunit; Malonate Decarboxylase Gamma-Subunit MdcE; Malonate Decarboxylase Subunit MdcE
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLASTRAHPQRPIVMLADTAGQR LARRDELLGINGYFAHLARALELARRRGARLITLVYGESVSGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDT LQALSKSSPVFAPGVENYVRMGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA
Sequences:
>Translated_234_residues MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLASTRAHPQRPIVMLADTAGQR LARRDELLGINGYFAHLARALELARRRGARLITLVYGESVSGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDT LQALSKSSPVFAPGVENYVRMGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA >Mature_234_residues MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLASTRAHPQRPIVMLADTAGQR LARRDELLGINGYFAHLARALELARRRGARLITLVYGESVSGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDT LQALSKSSPVFAPGVENYVRMGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24722; Mature: 24722
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLA CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH STRAHPQRPIVMLADTAGQRLARRDELLGINGYFAHLARALELARRRGARLITLVYGESV HHCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC SGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDTLQALSKSSPVFAPGVENYVR CCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH MGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA HHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLA CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH STRAHPQRPIVMLADTAGQRLARRDELLGINGYFAHLARALELARRRGARLITLVYGESV HHCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC SGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDTLQALSKSSPVFAPGVENYVR CCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH MGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA HHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA