Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is mdcC

Identifier: 21241334

GI number: 21241334

Start: 664552

End: 665256

Strand: Direct

Name: mdcC

Synonym: XAC0563

Alternate gene names: NA

Gene position: 664552-665256 (Clockwise)

Preceding gene: 21241333

Following gene: 21241335

Centisome position: 12.84

GC content: 68.23

Gene sequence:

>705_bases
ATGGACCTGAGCCGCTTGCTCGATCAGCTGTTTCCGCTCGGTCACGCCATCGCGCGCAACGACGATGTGCTCACCGGCAG
TGCAACCACCGCCGCCGGCGACGTCACCGTGATCGGTACCGCCAACAAGCTCGAAGTCGGTGTCGATCACGCCTTGGCCT
TGGCTGCCACTGTCCTGGCGAGTACCCGCGCTCACCCGCAGCGCCCGATCGTGATGCTGGCCGACACTGCCGGGCAGCGG
CTGGCACGGCGCGACGAATTACTCGGCATCAACGGCTATTTCGCACATCTGGCACGTGCGCTGGAGTTGGCACGCAGGCG
CGGGGCGCGGCTGATCACGCTGGTCTACGGCGAATCGGTCAGCGGTGGGTTCCTGTCGTTCGGCTTGATGGCCGACCATA
TCCATGCATTGCCCGATGCGCAGATCCGGGTCATGGATCTGCGCGCGATGGCGCGCGTGACCAAGCAGTCGGTCGACACC
TTGCAGGCGTTGAGCAAGAGCTCGCCGGTGTTCGCGCCAGGCGTGGAAAATTACGTGCGCATGGGCGCGGTGGAATCGCT
GTGGGAGGGCGATCTGGCGCAGGCGCTGCTCGACGCACTGGCCGCGCCGGTCGACGGCGACCAGCGCCGCGCGCGCGGCG
CGCAACGCGGCGGGCGCACGCTGGCGCGCGATGTCGCCAGCGCCGTGGTTGCGGGCGAGGCCTGA

Upstream 100 bases:

>100_bases
GACTGGAGATCTGGACGCGCCAGGGCATTGTCGATGCGCAGCGCCTGCCGCTGCTCGATACCGAGGCCTTTCTTGCCGCA
ACCGCAGACCGGAGCCTTCC

Downstream 100 bases:

>100_bases
GCATGGCCGGCCGCCACGCCCTGGTGTGGTTACGCGAGGATGCGCAGTGGCAGGCCGTCACGTCTGGCGCGCAGCCACGG
CTGCAGCAGTGGTTCGCGGC

Product: malonate decarboxylase gamma subunit

Products: NA

Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Gamma-Subunit; Malonate Decarboxylase Gamma-Subunit MdcE; Malonate Decarboxylase Subunit MdcE

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLASTRAHPQRPIVMLADTAGQR
LARRDELLGINGYFAHLARALELARRRGARLITLVYGESVSGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDT
LQALSKSSPVFAPGVENYVRMGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA

Sequences:

>Translated_234_residues
MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLASTRAHPQRPIVMLADTAGQR
LARRDELLGINGYFAHLARALELARRRGARLITLVYGESVSGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDT
LQALSKSSPVFAPGVENYVRMGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA
>Mature_234_residues
MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLASTRAHPQRPIVMLADTAGQR
LARRDELLGINGYFAHLARALELARRRGARLITLVYGESVSGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDT
LQALSKSSPVFAPGVENYVRMGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24722; Mature: 24722

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLA
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
STRAHPQRPIVMLADTAGQRLARRDELLGINGYFAHLARALELARRRGARLITLVYGESV
HHCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC
SGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDTLQALSKSSPVFAPGVENYVR
CCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
MGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA
HHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLSRLLDQLFPLGHAIARNDDVLTGSATTAAGDVTVIGTANKLEVGVDHALALAATVLA
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
STRAHPQRPIVMLADTAGQRLARRDELLGINGYFAHLARALELARRRGARLITLVYGESV
HHCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC
SGGFLSFGLMADHIHALPDAQIRVMDLRAMARVTKQSVDTLQALSKSSPVFAPGVENYVR
CCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
MGAVESLWEGDLAQALLDALAAPVDGDQRRARGAQRGGRTLARDVASAVVAGEA
HHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA