Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is yceI [C]
Identifier: 21241326
GI number: 21241326
Start: 657004
End: 657828
Strand: Direct
Name: yceI [C]
Synonym: XAC0555
Alternate gene names: 21241326
Gene position: 657004-657828 (Clockwise)
Preceding gene: 77748536
Following gene: 21241327
Centisome position: 12.69
GC content: 66.67
Gene sequence:
>825_bases TTGCGTTTCCTGCAGTCCTCGTCCGTCTGCATCTGTCCCACCCGCGTTGTTCCGACGCGTCTCTCATCCCATGGAGTTCC AATGAAGACCACCCACAAGCTGTTGCTGCCGCTCGCCCTGACCCTGGCCATTGCCGCCTGCTCCAAGCCGGCCGAGAACA CTGCCGCCCCGGCCGCCGAAACCCCGGCGGCGGCCACCGCCCCGGCCGACGCCGCTGCTGCGCCGGCACCTGCACCGGCA GCTGCCGCCTCGACCGCCCCGGCCGTGGAAGTGGCATCGGGCACCTACACCCTGGACCCGTCGCATACCGACGTGCTGGC GCAGTGGAGCCACTTCGGCTTCTCCAACCCGAGCGCGCACTTCGGCAATGTCGACGGTACCCTGGTGTACGACGCGGCCG ACGTGACCAAGTCCACCGTGCAGGTCACCCTGCCGCTGTCCGGCTTGAACAGCTTCACCGCCAAGTTCGACGAACACCTG AAGAGCGGTGACTTCTTCGATGCGGCCAAGTTCCCGACCGCCACCTTCAAGAGCACCAAGGTGGAAGCTGCCGGCACCAA CAAGCTGACCGTCACGGGCGACCTGACCATCAAGGGGCAGACCAAGCCGGTCGTGCTGGACGTCACCCTCAACGGTGCCG GCGAGCACCCGATGAAGAAGGTGCCGGCCGCCGGTTTCGACGCCACCACCACCATCAAGCGCAGCGATTTCGGCCTGGGC CAGTACGCCCCGAACGTCAGCGACGAAGTGAAGATCCGCATCACCACCGAAGCCCTGCAGGCCAAGGCGGGCGATGCGGC GGCGAAGGATGCCGCAGCCAAGTAA
Upstream 100 bases:
>100_bases GCCCGGCACACTGCGTGTGCCTGCCACGTTCAAGCGACGCCGTTGGCCGTTCGCCTGACGATCGCTTGATCTCGCTCGCA GTGTCGACGTACATGGTGTC
Downstream 100 bases:
>100_bases GCGGTCTGGCTGCTGTCCAGGCAAAGGCCCGCTTCGGCGGGCCTTTGTCGTTGAGGGGGATGGCCACGTGCGACCCCGTC GGGTGTGGCGAGGTCATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MRFLQSSSVCICPTRVVPTRLSSHGVPMKTTHKLLLPLALTLAIAACSKPAENTAAPAAETPAAATAPADAAAAPAPAPA AAASTAPAVEVASGTYTLDPSHTDVLAQWSHFGFSNPSAHFGNVDGTLVYDAADVTKSTVQVTLPLSGLNSFTAKFDEHL KSGDFFDAAKFPTATFKSTKVEAAGTNKLTVTGDLTIKGQTKPVVLDVTLNGAGEHPMKKVPAAGFDATTTIKRSDFGLG QYAPNVSDEVKIRITTEALQAKAGDAAAKDAAAK
Sequences:
>Translated_274_residues MRFLQSSSVCICPTRVVPTRLSSHGVPMKTTHKLLLPLALTLAIAACSKPAENTAAPAAETPAAATAPADAAAAPAPAPA AAASTAPAVEVASGTYTLDPSHTDVLAQWSHFGFSNPSAHFGNVDGTLVYDAADVTKSTVQVTLPLSGLNSFTAKFDEHL KSGDFFDAAKFPTATFKSTKVEAAGTNKLTVTGDLTIKGQTKPVVLDVTLNGAGEHPMKKVPAAGFDATTTIKRSDFGLG QYAPNVSDEVKIRITTEALQAKAGDAAAKDAAAK >Mature_274_residues MRFLQSSSVCICPTRVVPTRLSSHGVPMKTTHKLLLPLALTLAIAACSKPAENTAAPAAETPAAATAPADAAAAPAPAPA AAASTAPAVEVASGTYTLDPSHTDVLAQWSHFGFSNPSAHFGNVDGTLVYDAADVTKSTVQVTLPLSGLNSFTAKFDEHL KSGDFFDAAKFPTATFKSTKVEAAGTNKLTVTGDLTIKGQTKPVVLDVTLNGAGEHPMKKVPAAGFDATTTIKRSDFGLG QYAPNVSDEVKIRITTEALQAKAGDAAAKDAAAK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=169, Percent_Identity=37.2781065088757, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 28088; Mature: 28088
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLQSSSVCICPTRVVPTRLSSHGVPMKTTHKLLLPLALTLAIAACSKPAENTAAPAAE CCCCCCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TPAAATAPADAAAAPAPAPAAAASTAPAVEVASGTYTLDPSHTDVLAQWSHFGFSNPSAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCHHHHHHHHHCCCCCCCCC FGNVDGTLVYDAADVTKSTVQVTLPLSGLNSFTAKFDEHLKSGDFFDAAKFPTATFKSTK CCCCCCEEEEEHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE VEAAGTNKLTVTGDLTIKGQTKPVVLDVTLNGAGEHPMKKVPAAGFDATTTIKRSDFGLG EEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCCEEEEECCCCCCC QYAPNVSDEVKIRITTEALQAKAGDAAAKDAAAK CCCCCCCCCEEEEEEHHHHHCCCCCCHHHHCCCC >Mature Secondary Structure MRFLQSSSVCICPTRVVPTRLSSHGVPMKTTHKLLLPLALTLAIAACSKPAENTAAPAAE CCCCCCCCEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TPAAATAPADAAAAPAPAPAAAASTAPAVEVASGTYTLDPSHTDVLAQWSHFGFSNPSAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCHHHHHHHHHCCCCCCCCC FGNVDGTLVYDAADVTKSTVQVTLPLSGLNSFTAKFDEHLKSGDFFDAAKFPTATFKSTK CCCCCCEEEEEHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE VEAAGTNKLTVTGDLTIKGQTKPVVLDVTLNGAGEHPMKKVPAAGFDATTTIKRSDFGLG EEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCCEEEEECCCCCCC QYAPNVSDEVKIRITTEALQAKAGDAAAKDAAAK CCCCCCCCCEEEEEEHHHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA