Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241317
Identifier: 21241317
GI number: 21241317
Start: 642263
End: 644470
Strand: Direct
Name: 21241317
Synonym: XAC0546
Alternate gene names: NA
Gene position: 642263-644470 (Clockwise)
Preceding gene: 21241316
Following gene: 21241318
Centisome position: 12.41
GC content: 66.98
Gene sequence:
>2208_bases GTGGCGGCAGACTCTTTCCTGCCTGCGCCCATGCCCTCACTTCGCGACCGCTTCCAGCGCTGGCCACGGCCGTGGCGTCG TGCAGTGGGCATTGTGCTGGCGCTCTACGCGCTGTATCTGCTGGCCGGCAACCTCTATCTCAATACACCGCTGTTCGACG CCAGCACCAATCGGCAGCCGCACAAGTTCACCATGCAGACCGGCCCGGCGGTGACGCTGTTCCCGGGCGAGGTCATCGCC TGGAACGTGCGCATGCGCGGGCAGGCCAACCGTACCGTGTATGTCTTCCATGCCGACCGCGCACATGCGCGTATCGCCCT GCTGGCCTTGTTTCGGCGCGAAGTGCGCCTGCCGTGGCTGCATGCCACCGGCGTGAGCGCAGAAGTGGAAACCTCCGATA CGCCCATTCCGCCGCCACCGCGGGGCAACCAAGGCTGGACGTTGCGCTTCGATGCAATCACCAGCAACAGCATTCGCAGT GCCCGCCTGGGCAAATTACTGATCGCCGGGAAGGGGCACGGCAAGGTCGGTTTTCTGAAGCAACTCAAGGGCGGGCCGTC GGAACTGTTTCCTTCCGAAGCGGGCTTTACCGATGCGGTGGTCAGCTACGACGGGGTGCAGGTGTTCAACGGTGCGCAGC TGGATGCGCAGTTCCAGTTTCCACGCCATTACCGCGACCAGGCGCCGGGCTTGCGCAAGCTCGGCATCACCGCCGCCCGG CTACAGCTGAAGGCCAATTCCGTGGCGCTGAAGATCGATACCGGCGCGCCGCATGTGGACATCGGCAGCGGGCCATCGGC AGCCCGCGTGGAGGCCGATATCCGCCTGGCCAGCGGCGCGCTGCAGCCGGGCAGCCGCGCGGTGTGGCGGTTGCCATTGC TTGCGGGCGTGGGCGCCACCGACCGCGGCATGCTCGCGCTGCAGCTGGATGTGGCACAGGACATCCGCGTGCAGGCGCGG CTGCCGCGCGACGAGAAGACCGGCAGCGAGCTGCACGCCGATCTGCGCATCGCCGGGCGCAGTGTTCCGTTCGAACAGCC GGCGCAGCTGTTGCCGCGTCTGTCGGGGCAGGTGCGTGGGCGCTGGAAGTTCGAATCCTTGAACTGGATCGCCGAGCTGT TCGTGCGCAAGCCGTGGTTCCAGCTGGAAGGCGGCGGTCTGGTCGAAGCGGACCTGCGCCTTGCACAGGGCCGGCTGAGT GCCGGCAGCACGCTGGATATTCCGCGCGTGGAGGCCGTGGCACAGGTGTTCGACACGCGCCTGGCCGGCGTCGCCAAGGC GCACGGGCGCATCGACGATGCCGCCACGGCGCAGGCGCATCTGGATGTGAGCATTCCCACCTTCAAGGCGGCGCCGCGCG ATGCGCCCAGACAGCTCCTGCTGGATGGCCGCGATCTGCAACTGGCCATGCATGGCGATGCCGAGCTGGCCCGCCTGAGC GATACGCTCAAGGCGCAGCTGCGTTTCAGCGATGCGCGTGTGCCCGATCTCACCGCCTACAACCGCTATCTGCCGGGCAA TAACGTGCGCCTGCTCGGCGGTAGCGGCAGCCTGACCGGCGATGTGGCGCTCAATGCGTCCGGCGAGGTCGGTAATGGGC ATGCGAACCTGCGCGGGCAGGGCGCGCATCTTGCGTTGGCTGGCGTACAGATGCGCGGCGATGCCGAGTTGCAGGCAACG CTGCAGCGCGCCGACTTCAAGAACAAGTTCTTCGACCTCGGCGGCACGCGCATACGCCTGCGCAATATGCGCGTGGGGGA CGAAGTCAGCGATGCGAATTGGTGGGGCGACTTGCAGGTGGGTGCCGGTACGATCCAGGCCGAAGCACCGTTCCAGGTGG ATGCCGACGCAGCCCTTCGTATGCGCGATATCGCCCCACTGCTCTCGGTGTTCGCCCAGCGCGCCGACTATCCGCGCTGG GTGCTGGGTTTGCTGGATTCGGGCGAACTGGATGCCACTGGTCGAGTGCGTTGGCGCAAGCAGCGGGTGCTGATCGACGA CCTGCATGCGGAAAACGCGCGCTTGTCGCTGCGTGCGCGGCTGGCCTTGAACGATGCGCAGCGGCGCGGCGATCTGTATC TGCGCTGGGGCGTGCTGGGTGCCGGCATCGAACTCGATGGCAAGCAGCGGCAGTGGCATCTGGCGGGCGCACGCGAGTGG TATGACGCGCGGCCGGCACTGTTGCCGGCGGTCTCCAAAACCAAGTGA
Upstream 100 bases:
>100_bases CGCCAATCTCCAAGCTCGCCGCCGATTCCCAATTCCCAATTCCCAATTCCCGCAACGGCACCAGCCTTGTTCACGCTTCG CGGTCAGCGCAACCGGGATA
Downstream 100 bases:
>100_bases TGCGGCCGCTGGCGTGATCGTGCTGCGCCGTGCTCACGGCTGGCTTGGCACACTGTGCCCAGCCGCGTGCGCGGTTTTCA GGAGCCTGCCGTCATGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MAADSFLPAPMPSLRDRFQRWPRPWRRAVGIVLALYALYLLAGNLYLNTPLFDASTNRQPHKFTMQTGPAVTLFPGEVIA WNVRMRGQANRTVYVFHADRAHARIALLALFRREVRLPWLHATGVSAEVETSDTPIPPPPRGNQGWTLRFDAITSNSIRS ARLGKLLIAGKGHGKVGFLKQLKGGPSELFPSEAGFTDAVVSYDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITAAR LQLKANSVALKIDTGAPHVDIGSGPSAARVEADIRLASGALQPGSRAVWRLPLLAGVGATDRGMLALQLDVAQDIRVQAR LPRDEKTGSELHADLRIAGRSVPFEQPAQLLPRLSGQVRGRWKFESLNWIAELFVRKPWFQLEGGGLVEADLRLAQGRLS AGSTLDIPRVEAVAQVFDTRLAGVAKAHGRIDDAATAQAHLDVSIPTFKAAPRDAPRQLLLDGRDLQLAMHGDAELARLS DTLKAQLRFSDARVPDLTAYNRYLPGNNVRLLGGSGSLTGDVALNASGEVGNGHANLRGQGAHLALAGVQMRGDAELQAT LQRADFKNKFFDLGGTRIRLRNMRVGDEVSDANWWGDLQVGAGTIQAEAPFQVDADAALRMRDIAPLLSVFAQRADYPRW VLGLLDSGELDATGRVRWRKQRVLIDDLHAENARLSLRARLALNDAQRRGDLYLRWGVLGAGIELDGKQRQWHLAGAREW YDARPALLPAVSKTK
Sequences:
>Translated_735_residues MAADSFLPAPMPSLRDRFQRWPRPWRRAVGIVLALYALYLLAGNLYLNTPLFDASTNRQPHKFTMQTGPAVTLFPGEVIA WNVRMRGQANRTVYVFHADRAHARIALLALFRREVRLPWLHATGVSAEVETSDTPIPPPPRGNQGWTLRFDAITSNSIRS ARLGKLLIAGKGHGKVGFLKQLKGGPSELFPSEAGFTDAVVSYDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITAAR LQLKANSVALKIDTGAPHVDIGSGPSAARVEADIRLASGALQPGSRAVWRLPLLAGVGATDRGMLALQLDVAQDIRVQAR LPRDEKTGSELHADLRIAGRSVPFEQPAQLLPRLSGQVRGRWKFESLNWIAELFVRKPWFQLEGGGLVEADLRLAQGRLS AGSTLDIPRVEAVAQVFDTRLAGVAKAHGRIDDAATAQAHLDVSIPTFKAAPRDAPRQLLLDGRDLQLAMHGDAELARLS DTLKAQLRFSDARVPDLTAYNRYLPGNNVRLLGGSGSLTGDVALNASGEVGNGHANLRGQGAHLALAGVQMRGDAELQAT LQRADFKNKFFDLGGTRIRLRNMRVGDEVSDANWWGDLQVGAGTIQAEAPFQVDADAALRMRDIAPLLSVFAQRADYPRW VLGLLDSGELDATGRVRWRKQRVLIDDLHAENARLSLRARLALNDAQRRGDLYLRWGVLGAGIELDGKQRQWHLAGAREW YDARPALLPAVSKTK >Mature_734_residues AADSFLPAPMPSLRDRFQRWPRPWRRAVGIVLALYALYLLAGNLYLNTPLFDASTNRQPHKFTMQTGPAVTLFPGEVIAW NVRMRGQANRTVYVFHADRAHARIALLALFRREVRLPWLHATGVSAEVETSDTPIPPPPRGNQGWTLRFDAITSNSIRSA RLGKLLIAGKGHGKVGFLKQLKGGPSELFPSEAGFTDAVVSYDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITAARL QLKANSVALKIDTGAPHVDIGSGPSAARVEADIRLASGALQPGSRAVWRLPLLAGVGATDRGMLALQLDVAQDIRVQARL PRDEKTGSELHADLRIAGRSVPFEQPAQLLPRLSGQVRGRWKFESLNWIAELFVRKPWFQLEGGGLVEADLRLAQGRLSA GSTLDIPRVEAVAQVFDTRLAGVAKAHGRIDDAATAQAHLDVSIPTFKAAPRDAPRQLLLDGRDLQLAMHGDAELARLSD TLKAQLRFSDARVPDLTAYNRYLPGNNVRLLGGSGSLTGDVALNASGEVGNGHANLRGQGAHLALAGVQMRGDAELQATL QRADFKNKFFDLGGTRIRLRNMRVGDEVSDANWWGDLQVGAGTIQAEAPFQVDADAALRMRDIAPLLSVFAQRADYPRWV LGLLDSGELDATGRVRWRKQRVLIDDLHAENARLSLRARLALNDAQRRGDLYLRWGVLGAGIELDGKQRQWHLAGAREWY DARPALLPAVSKTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80476; Mature: 80345
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADSFLPAPMPSLRDRFQRWPRPWRRAVGIVLALYALYLLAGNLYLNTPLFDASTNRQP CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEECCCCCCCC HKFTMQTGPAVTLFPGEVIAWNVRMRGQANRTVYVFHADRAHARIALLALFRREVRLPWL CEEEECCCCEEEEECCCEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE HATGVSAEVETSDTPIPPPPRGNQGWTLRFDAITSNSIRSARLGKLLIAGKGHGKVGFLK EECCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHCCCEEEEEECCCCCCHHHH QLKGGPSELFPSEAGFTDAVVSYDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITAAR HHCCCCHHCCCCCCCCCHHEEECCCEEEECCCEECEEECCCHHHHHCCCCCHHHCCEEEE LQLKANSVALKIDTGAPHVDIGSGPSAARVEADIRLASGALQPGSRAVWRLPLLAGVGAT EEEEECEEEEEEECCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEHHCCCCCC DRGMLALQLDVAQDIRVQARLPRDEKTGSELHADLRIAGRSVPFEQPAQLLPRLSGQVRG CCCEEEEEEECCCCCEEEEECCCCCCCCCHHEEEEEEECCCCCCCCHHHHHHHCCCCCCC RWKFESLNWIAELFVRKPWFQLEGGGLVEADLRLAQGRLSAGSTLDIPRVEAVAQVFDTR EEEEHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LAGVAKAHGRIDDAATAQAHLDVSIPTFKAAPRDAPRQLLLDGRDLQLAMHGDAELARLS HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHEECCCEEEEEECCCCHHHHHH DTLKAQLRFSDARVPDLTAYNRYLPGNNVRLLGGSGSLTGDVALNASGEVGNGHANLRGQ HHHHEEEEECCCCCCCCCHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCC GAHLALAGVQMRGDAELQATLQRADFKNKFFDLGGTRIRLRNMRVGDEVSDANWWGDLQV CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEE GAGTIQAEAPFQVDADAALRMRDIAPLLSVFAQRADYPRWVLGLLDSGELDATGRVRWRK CCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCEEEHEECCCCCCCCCCCEEEEE QRVLIDDLHAENARLSLRARLALNDAQRRGDLYLRWGVLGAGIELDGKQRQWHLAGAREW CEEEEECCCCCCCEEEEEEEEEECCHHCCCCEEEEEEEEECCEEECCCCCEEEECCCHHH YDARPALLPAVSKTK HCCCCCCCCCCCCCC >Mature Secondary Structure AADSFLPAPMPSLRDRFQRWPRPWRRAVGIVLALYALYLLAGNLYLNTPLFDASTNRQP CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEECCCCCCCC HKFTMQTGPAVTLFPGEVIAWNVRMRGQANRTVYVFHADRAHARIALLALFRREVRLPWL CEEEECCCCEEEEECCCEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE HATGVSAEVETSDTPIPPPPRGNQGWTLRFDAITSNSIRSARLGKLLIAGKGHGKVGFLK EECCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHCCCEEEEEECCCCCCHHHH QLKGGPSELFPSEAGFTDAVVSYDGVQVFNGAQLDAQFQFPRHYRDQAPGLRKLGITAAR HHCCCCHHCCCCCCCCCHHEEECCCEEEECCCEECEEECCCHHHHHCCCCCHHHCCEEEE LQLKANSVALKIDTGAPHVDIGSGPSAARVEADIRLASGALQPGSRAVWRLPLLAGVGAT EEEEECEEEEEEECCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEHHCCCCCC DRGMLALQLDVAQDIRVQARLPRDEKTGSELHADLRIAGRSVPFEQPAQLLPRLSGQVRG CCCEEEEEEECCCCCEEEEECCCCCCCCCHHEEEEEEECCCCCCCCHHHHHHHCCCCCCC RWKFESLNWIAELFVRKPWFQLEGGGLVEADLRLAQGRLSAGSTLDIPRVEAVAQVFDTR EEEEHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LAGVAKAHGRIDDAATAQAHLDVSIPTFKAAPRDAPRQLLLDGRDLQLAMHGDAELARLS HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHEECCCEEEEEECCCCHHHHHH DTLKAQLRFSDARVPDLTAYNRYLPGNNVRLLGGSGSLTGDVALNASGEVGNGHANLRGQ HHHHEEEEECCCCCCCCCHHCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCC GAHLALAGVQMRGDAELQATLQRADFKNKFFDLGGTRIRLRNMRVGDEVSDANWWGDLQV CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEE GAGTIQAEAPFQVDADAALRMRDIAPLLSVFAQRADYPRWVLGLLDSGELDATGRVRWRK CCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCEEEHEECCCCCCCCCCCEEEEE QRVLIDDLHAENARLSLRARLALNDAQRRGDLYLRWGVLGAGIELDGKQRQWHLAGAREW CEEEEECCCCCCCEEEEEEEEEECCHHCCCCEEEEEEEEECCEEECCCCCEEEECCCHHH YDARPALLPAVSKTK HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA