Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is aroG [H]
Identifier: 21241316
GI number: 21241316
Start: 640401
End: 641474
Strand: Direct
Name: aroG [H]
Synonym: XAC0545
Alternate gene names: 21241316
Gene position: 640401-641474 (Clockwise)
Preceding gene: 77748535
Following gene: 21241317
Centisome position: 12.37
GC content: 66.2
Gene sequence:
>1074_bases ATGCCGCCCGTCACCGATGACCTGCGTATCCGCAAGATCGAAGCCCTCGCACCGCCCGCGCAGCTGCTGTCGCTGCTGCC CTGCGATGAGCGCGCCTCCGAAACCGTGACCAACGCGCGCGCCGCGCTGCACGACATCCTGCATGGGCGCGACGACCGCC TGGCCGTGGTGATCGGGCCATGCTCGATCCACGACCCGGTCGCGGCGATGGAGTACGCGCAACGCTTGCGCCCGTTGCGC GATCAGTTCGGCGACGCGCTGGAGATCGTGATGCGGGTGTACTTCGAAAAGCCGCGCACCACCATCGGCTGGAAGGGCTT GATCAACGATCCGGACCTGGACGGCAGCTTCCAGATCAACAAGGGCCTGCGCGTGGCGCGTGGCCTGCTGCGCGATATCA ACAATCTCGGCCTGCCGGCCGGCGTGGAATTTCTCGACATCATTTCGCCGCAATACATCGCCGACCTGGTGGCCTGGGGC GCGATCGGCGCACGCACCACCGAGAGCCAGGTGCATCGCGAAATGGCGTCCGGGCTGTCATGCCCGGTGGGCTTCAAGAA CGGCACCGGTGGCGACGTCAAGATTGCGGTGGACGCGGTGGGCGCGGCCTCGCATCCGCATCATTTCCTGGCCGTGACCA AGGACGGACATACCGCCGTGGCAGCGACGGCGGGCAATCCGGATTGCCATGTGATCCTGCGCGGCGGCAAACAGCCCAAC TTCGATGCGGCCAATGTGGAAGCGGCCAGCCAGGTGCTCAATGCATCCGGCCTGCCCGCGCGCCTGATGATCGATGCCAG CCACGCCAACAGCAGCAAGAATCCCGAGAACCAGCCCAAGGTCGTCGAGGACATCGCCAACCAGCTGGAAGGCGGCGAAA CACGCATCGTCGGCGTGATGGTGGAAAGTCACCTGGTCGGTGGACGCCAGGACCTCTTGCCGGGGTGCGAGCTGACCTAC GGCCAGAGCATTACCGACGGCTGCATCGGCTGGGACAGTTCGGTGCAGGTGCTGGAACGCCTGGCGACCGCAGTGCGCGC ACGGCGCATGCGCCGGATTGCCGAGGCTGCATGA
Upstream 100 bases:
>100_bases TCAGCAGCATTCCCGAAAAGCCGCCAGCGCACACCTGGCGGCTTTTTTGTTGCCGCCGCGCCTGGTTCCCTGATGCAACA CCGCCCACCGAGACACTGTT
Downstream 100 bases:
>100_bases GTTGCGGCGCAGCAGCATCGGCAGAACACTTGCTGATGCTGCATGGGGCGTCGCCCACTGGAAATCACGGCGAGGCAGCG CGTGCCTGGTCTGCGGTGAG
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPPVTDDLRIRKIEALAPPAQLLSLLPCDERASETVTNARAALHDILHGRDDRLAVVIGPCSIHDPVAAMEYAQRLRPLR DQFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQINKGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWG AIGARTTESQVHREMASGLSCPVGFKNGTGGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPN FDAANVEAASQVLNASGLPARLMIDASHANSSKNPENQPKVVEDIANQLEGGETRIVGVMVESHLVGGRQDLLPGCELTY GQSITDGCIGWDSSVQVLERLATAVRARRMRRIAEAA
Sequences:
>Translated_357_residues MPPVTDDLRIRKIEALAPPAQLLSLLPCDERASETVTNARAALHDILHGRDDRLAVVIGPCSIHDPVAAMEYAQRLRPLR DQFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQINKGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWG AIGARTTESQVHREMASGLSCPVGFKNGTGGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPN FDAANVEAASQVLNASGLPARLMIDASHANSSKNPENQPKVVEDIANQLEGGETRIVGVMVESHLVGGRQDLLPGCELTY GQSITDGCIGWDSSVQVLERLATAVRARRMRRIAEAA >Mature_356_residues PPVTDDLRIRKIEALAPPAQLLSLLPCDERASETVTNARAALHDILHGRDDRLAVVIGPCSIHDPVAAMEYAQRLRPLRD QFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQINKGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWGA IGARTTESQVHREMASGLSCPVGFKNGTGGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPNF DAANVEAASQVLNASGLPARLMIDASHANSSKNPENQPKVVEDIANQLEGGETRIVGVMVESHLVGGRQDLLPGCELTYG QSITDGCIGWDSSVQVLERLATAVRARRMRRIAEAA
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=345, Percent_Identity=64.6376811594203, Blast_Score=466, Evalue=1e-133, Organism=Escherichia coli, GI1787996, Length=344, Percent_Identity=53.7790697674419, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI1788953, Length=350, Percent_Identity=47.7142857142857, Blast_Score=349, Evalue=2e-97, Organism=Saccharomyces cerevisiae, GI6319726, Length=360, Percent_Identity=53.8888888888889, Blast_Score=365, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6320240, Length=352, Percent_Identity=52.5568181818182, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38233; Mature: 38102
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVTDDLRIRKIEALAPPAQLLSLLPCDERASETVTNARAALHDILHGRDDRLAVVIGP CCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC CSIHDPVAAMEYAQRLRPLRDQFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQIN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC KGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWGAIGARTTESQVHREMASGLS CCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC CPVGFKNGTGGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPN CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCC FDAANVEAASQVLNASGLPARLMIDASHANSSKNPENQPKVVEDIANQLEGGETRIVGVM CCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEE VESHLVGGRQDLLPGCELTYGQSITDGCIGWDSSVQVLERLATAVRARRMRRIAEAA EHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPVTDDLRIRKIEALAPPAQLLSLLPCDERASETVTNARAALHDILHGRDDRLAVVIGP CCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC CSIHDPVAAMEYAQRLRPLRDQFGDALEIVMRVYFEKPRTTIGWKGLINDPDLDGSFQIN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC KGLRVARGLLRDINNLGLPAGVEFLDIISPQYIADLVAWGAIGARTTESQVHREMASGLS CCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC CPVGFKNGTGGDVKIAVDAVGAASHPHHFLAVTKDGHTAVAATAGNPDCHVILRGGKQPN CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCC FDAANVEAASQVLNASGLPARLMIDASHANSSKNPENQPKVVEDIANQLEGGETRIVGVM CCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEE VESHLVGGRQDLLPGCELTYGQSITDGCIGWDSSVQVLERLATAVRARRMRRIAEAA EHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]