Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241120
Identifier: 21241120
GI number: 21241120
Start: 413313
End: 414674
Strand: Direct
Name: 21241120
Synonym: XAC0346
Alternate gene names: NA
Gene position: 413313-414674 (Clockwise)
Preceding gene: 21241118
Following gene: 21241121
Centisome position: 7.99
GC content: 66.74
Gene sequence:
>1362_bases ATGTCCGACCATCCATCTCCACGCCGTGCACCAGCGGCACCGCCCCACTCCACCACGCCACCGGTCGCCGGCGGCATCAC CCGCCGTCGCGTCCTGCAAGGGGCGGCCGGCGCCGCGGTCGTGGCCACTGCCGGCTGGGCAGGCCGCGCAGCCGCGCAAA GCGCCAGCCTGCCGTTCGCTGGCCTCAACCTGTCCGGTTTGGCCTCCAATAGTTATGTGGAAAACGCCGAGATCGGCACG CATTACCGCGCCATCACTGCCCAGCATGTGGCCGCGGCAGGAAGCTGCCCGCTCTTCCGTCTGCCGACCACCGCCGCGCG CTTCACGCGTGGGCAGGGCGCGCCGTTGAACGAGAGCTACTGCAAGCAGGTGCAGGACGCGTTGGACAATATCGCAGCGC GCGGCAAGCGCGCCATCGTGGAGCTGCACGATTACATGCGGCTGCCGCAGCGGGTGGCGGCCAAGAGCGGATACCGGCGC GACGCCAGCGGTGCAGTCGTCGATGCGCGCGGCATTCGTGTGGGCGATCTGGCGGCGGCCGAGCTGTGGGCCGACACCTA TCCGCTGCGCAACTTCAATTACGTGGGCTATCTGGACGGTCGCGACCAGCTGCTCAAGCTCTACGAATACCGGGTGATCG GAACGCCGGGGTGCACGCTCTACAACGACGCCGGCCTGCCGGATCTGTGGGCGCGTATCGTCAACCGGTTCAAGCAGCAT CCGGCGGTGTTCGGCTGGGGCGTCATGAACGAGCCGTACCAGGGCGCCGAGCGCAATGCGGATGGCACGGTGCTGTCGAT GGCCGCACATTGGCAGAAGACCGCCACCGCCTGCTCCAAGACCATCATCGACCGCGATCGAAACCATTTCGTTTTCGTGT GCGGCAACGGCTATGCCAGCGCCCGGCGCTGGCAGGACGATTCGATGGACCTGTTCGACATCCCGGACCCGTACGATCGC ATCGTGTACGAGGCGCACAACTATCTCGACAACAACGGCAGCGGGGGCGGCAACTGGATTGGCCCCGGTGGGCGCAACGA GGTGATCCAGCCGGATACCGGCATCAACATGGTCAGCCCGTTTATCGAAGCGCTGCAGCAGGCCGGCAAGCGCGGTTATC TCGGCGAGCACGGCTATCCGGCCGGCAATCGCAGCGCGGAGATCGCCACCACGCGCATGCTGGCGCATCTGCAGGCCTAC AACATTCCCAGCACGCAATGGTGCTTCGGCCCCGGGTGGCCGGACGACGACGTGCTTGGCATGAGCCGCGACGTGGGTGC GGACATCCAGGCCAAGGCCAATCTCGCCGCCGTACAGGCGTTCTTCGACGTGCGCCTGTCCAGCTACATTCCGCCCCGCT AG
Upstream 100 bases:
>100_bases TCCGGGCGCTGGGGCGCGGCCACTATCGAGAGGGGTCGGTGCGGCCGAGGGGAGCTGCGCCGACGAGGATCTTTCCAACG GCACCGCAGGAGGCGCCCCT
Downstream 100 bases:
>100_bases CCGGCAGCGCCGCCGCTGCCGGGAGGTGGCGGCGGCTTACACTGCGGCATGCACATGGACATCCCCTGCCGCGCTGGCTG CGCGGCCTGCTGTATCGCCC
Product: degenerated cellulase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSDHPSPRRAPAAPPHSTTPPVAGGITRRRVLQGAAGAAVVATAGWAGRAAAQSASLPFAGLNLSGLASNSYVENAEIGT HYRAITAQHVAAAGSCPLFRLPTTAARFTRGQGAPLNESYCKQVQDALDNIAARGKRAIVELHDYMRLPQRVAAKSGYRR DASGAVVDARGIRVGDLAAAELWADTYPLRNFNYVGYLDGRDQLLKLYEYRVIGTPGCTLYNDAGLPDLWARIVNRFKQH PAVFGWGVMNEPYQGAERNADGTVLSMAAHWQKTATACSKTIIDRDRNHFVFVCGNGYASARRWQDDSMDLFDIPDPYDR IVYEAHNYLDNNGSGGGNWIGPGGRNEVIQPDTGINMVSPFIEALQQAGKRGYLGEHGYPAGNRSAEIATTRMLAHLQAY NIPSTQWCFGPGWPDDDVLGMSRDVGADIQAKANLAAVQAFFDVRLSSYIPPR
Sequences:
>Translated_453_residues MSDHPSPRRAPAAPPHSTTPPVAGGITRRRVLQGAAGAAVVATAGWAGRAAAQSASLPFAGLNLSGLASNSYVENAEIGT HYRAITAQHVAAAGSCPLFRLPTTAARFTRGQGAPLNESYCKQVQDALDNIAARGKRAIVELHDYMRLPQRVAAKSGYRR DASGAVVDARGIRVGDLAAAELWADTYPLRNFNYVGYLDGRDQLLKLYEYRVIGTPGCTLYNDAGLPDLWARIVNRFKQH PAVFGWGVMNEPYQGAERNADGTVLSMAAHWQKTATACSKTIIDRDRNHFVFVCGNGYASARRWQDDSMDLFDIPDPYDR IVYEAHNYLDNNGSGGGNWIGPGGRNEVIQPDTGINMVSPFIEALQQAGKRGYLGEHGYPAGNRSAEIATTRMLAHLQAY NIPSTQWCFGPGWPDDDVLGMSRDVGADIQAKANLAAVQAFFDVRLSSYIPPR >Mature_452_residues SDHPSPRRAPAAPPHSTTPPVAGGITRRRVLQGAAGAAVVATAGWAGRAAAQSASLPFAGLNLSGLASNSYVENAEIGTH YRAITAQHVAAAGSCPLFRLPTTAARFTRGQGAPLNESYCKQVQDALDNIAARGKRAIVELHDYMRLPQRVAAKSGYRRD ASGAVVDARGIRVGDLAAAELWADTYPLRNFNYVGYLDGRDQLLKLYEYRVIGTPGCTLYNDAGLPDLWARIVNRFKQHP AVFGWGVMNEPYQGAERNADGTVLSMAAHWQKTATACSKTIIDRDRNHFVFVCGNGYASARRWQDDSMDLFDIPDPYDRI VYEAHNYLDNNGSGGGNWIGPGGRNEVIQPDTGINMVSPFIEALQQAGKRGYLGEHGYPAGNRSAEIATTRMLAHLQAYN IPSTQWCFGPGWPDDDVLGMSRDVGADIQAKANLAAVQAFFDVRLSSYIPPR
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49093; Mature: 48962
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHPSPRRAPAAPPHSTTPPVAGGITRRRVLQGAAGAAVVATAGWAGRAAAQSASLPFA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCEE GLNLSGLASNSYVENAEIGTHYRAITAQHVAAAGSCPLFRLPTTAARFTRGQGAPLNESY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCCHHH CKQVQDALDNIAARGKRAIVELHDYMRLPQRVAAKSGYRRDASGAVVDARGIRVGDLAAA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEHHHHHH ELWADTYPLRNFNYVGYLDGRDQLLKLYEYRVIGTPGCTLYNDAGLPDLWARIVNRFKQH HHHHCCCCCCCCCEEEEECCHHHHHHHHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHC PAVFGWGVMNEPYQGAERNADGTVLSMAAHWQKTATACSKTIIDRDRNHFVFVCGNGYAS CCEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH ARRWQDDSMDLFDIPDPYDRIVYEAHNYLDNNGSGGGNWIGPGGRNEVIQPDTGINMVSP HHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH FIEALQQAGKRGYLGEHGYPAGNRSAEIATTRMLAHLQAYNIPSTQWCFGPGWPDDDVLG HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC MSRDVGADIQAKANLAAVQAFFDVRLSSYIPPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDHPSPRRAPAAPPHSTTPPVAGGITRRRVLQGAAGAAVVATAGWAGRAAAQSASLPFA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCEE GLNLSGLASNSYVENAEIGTHYRAITAQHVAAAGSCPLFRLPTTAARFTRGQGAPLNESY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCCHHH CKQVQDALDNIAARGKRAIVELHDYMRLPQRVAAKSGYRRDASGAVVDARGIRVGDLAAA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEHHHHHH ELWADTYPLRNFNYVGYLDGRDQLLKLYEYRVIGTPGCTLYNDAGLPDLWARIVNRFKQH HHHHCCCCCCCCCEEEEECCHHHHHHHHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHC PAVFGWGVMNEPYQGAERNADGTVLSMAAHWQKTATACSKTIIDRDRNHFVFVCGNGYAS CCEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH ARRWQDDSMDLFDIPDPYDRIVYEAHNYLDNNGSGGGNWIGPGGRNEVIQPDTGINMVSP HHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH FIEALQQAGKRGYLGEHGYPAGNRSAEIATTRMLAHLQAYNIPSTQWCFGPGWPDDDVLG HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC MSRDVGADIQAKANLAAVQAFFDVRLSSYIPPR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA